Phaethon lepturus (White-tailed tropicbird): 104614180
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Entry
104614180 CDS
T08325
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet04142
Lysosome
plet04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104614180
04142 Lysosome
104614180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plet04131
]
104614180
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plet04147
]
104614180
Membrane trafficking [BR:
plet04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
104614180
Exosome [BR:
plet04147
]
Exosomal proteins
Proteins found in most exosomes
104614180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
Coatomer_WDAD
Motif
Other DBs
NCBI-GeneID:
104614180
NCBI-ProteinID:
XP_010288663
LinkDB
All DBs
Position
Unknown
AA seq
1642 aa
AA seq
DB search
MESDKFICIREKVGEQAQVVIIDMSDPTTPIRRPISAESAIMNPASKVIALKDAGKTLQI
FNIEMKSKMKAHTMAEEVIFWKWISVNTVALVTETAVYHWSMEGESQPQKMFDRHASLAG
CQIINYRTDEHQKWLLLIGISAQQNRVVGAMQLYSVDRKVSQPIEGHAAAFAEFKIEGNA
KPSTLFCFAVRSPAGGKLHIIEVGQPATGNQPFVKKAVDVFFPPEAQTDFPVAMQIGIKH
GVIYLITKYGYIHMYDLESGVCIYMNRISADTIFVTAPHEPTSGIIGVNKKGQVLSVCVE
EDNIVNYATSVLQNPDLGLRMAIRSNLAGAEELFARKFNTLFAQGSYADAAKVAASAPKG
ILRTSDTIRKFQSVPAQPGQASPLLQYFGILLDQGQLNKFESLELCRPVLQQGRKQLLEK
WLKEDKLECSEELGDLVKTADPTLALSVYLRANVPNKVIQCFAETGQFQKIVLYAKKVGY
TPDWIFLLRSVMRVSPEQGLQFSQMLVQDEEPLANINQIVDVFMENSLIQQCTSFLLDAL
KNNRPAEGHLQTRLLEMNLIHAPQVADAILGNQMFTHYDRAHIAQLCEKAGLLQRALEHY
TDLYDIKRAVVHTHLLNPEWLVNFFGSLSVEDSVECLRAMLSANIRQNLQLCVQVASKYH
EQLGTQSLVELFESFKSYEGLFYFLGSIVNFSQDPDVHFKYIQAACKTGQIKEVERICRE
SNCYNPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPS
RIPAVVGGLLDVDCSEDVIKNLIMVVRGQFSTDELVAEVEKRNRLKLLLPWLESRIHEGC
EEPATHNALAKIYIDSNNNPERFLRENPYYDSRVVGKYCEKRDPHLACVAYERGQCDLEL
IKVCNENSLFKSEARYLVRRKDPELWANVLEENNPFRRQLIDQVVQTALSETQDPEEVSV
TVKAFMTADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNY
DAPDIANIAISNELYEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQ
LARAQLQKDLVKEAIDSYIKADDPSAYMEVVQAANRNDNWEDLVKFLQMARKKARESYVE
TELIFALAKTNRLSELEEFISGPNNAHIQQVGDRCYEEGMYEAAKLLYNNVSNFARLAST
LVHLGEYQAAVDSGRKANSTRTWKEVCFACVDGKEFRLAQICGLHIVIHADELEELISYY
QDRGYFEELIALLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLR
AAEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIIAKVANVELYYKALQF
YLDYKPLLINDLLLVLSPRLDHTRTVNFFSKVNQLLLVKPYLRSVQNHNNKGVNEALNNL
LTEEEDYQGLRASIDAYDNFDNITLAQRLEKHELIEFRRIAAYLYKGNNRWKQSVELCKK
DRLYKDAMQYAAESKDAELAEKLLQWFLEEGKQECFAACLFTCYDLLHPDVVLELAWRHN
IVDFAMPYFIQVMREYLTKVDKLDASESLRKEEEQVTEPTPIVFGQQLMLTAGPSAVPPQ
ANFPYGYTAPGFTQPPVYGFNM
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atggaatctgacaagttcatctgcatcagggagaaagtgggagagcaggcccaagtagtg
ataattgacatgagtgatccaacgacacccatcagacgtccaatttctgccgaaagtgcc
atcatgaatccagcctctaaagtaattgcactaaaagatgctgggaaaacacttcagatc
ttcaacattgagatgaaaagtaaaatgaaagcccacacgatggcagaggaagtgatcttc
tggaaatggatatctgtgaatacagttgccttggtgacagagacagcagtctaccactgg
agcatggagggagaatcacaacctcaaaagatgtttgacaggcatgctagtcttgcgggc
tgccaaatcatcaattacagaacagatgaacaccaaaaatggctgctgctgataggaatt
tcagcacagcaaaatcgtgtggttggtgcaatgcagctgtactcagttgatagaaaagtc
tcccaacctatagagggccacgcagcagcttttgcagaattcaaaatagagggaaatgcc
aaaccttctaccctcttctgttttgctgtgaggagtcctgcaggtggcaagctacacata
attgaagtaggtcagccagctactggaaatcagccatttgttaagaaagctgttgatgtg
tttttcccacctgaggcacagacagactttcctgtggcaatgcagattggaattaagcat
ggtgttatctacctgatcacaaagtatggatatatccacatgtatgacttggagtctgga
gtgtgcatctacatgaaccgtattagtgctgatactatctttgtcacagctcctcatgaa
cctacctcaggcattattggtgtgaacaaaaaaggacaggtgctttccgtatgtgtggag
gaagacaacatagtgaactatgctacgagtgttctccagaatcctgacttgggactgcgt
atggctatacgtagtaatctggctggggcagaagaattgtttgccagaaagttcaacaca
ctgtttgctcaaggaagctatgcagatgctgctaaagtagctgcatctgcaccaaaggga
attctacgtaccagtgatacaatcaggaagttccagagtgtgccagctcagcctgggcag
gcctctcccctgctccagtactttggaatattgcttgaccagggacagctgaacaagttt
gaatctctggagctctgtcgccctgtcttacagcagggccgcaaacagcttctagagaag
tggctgaaggaagacaagctggagtgctcggaggagctgggagacttggtgaagaccgct
gacccaacccttgcactcagtgtctatcttcgtgctaatgtgccaaacaaagtgattcag
tgctttgctgaaactggtcagttccagaaaatagtgctgtatgctaaaaaggttggctat
accccagactggatcttcttactgagaagtgtgatgagagtcagtccagagcaaggcttg
cagttctctcagatgctggtacaggatgaggagccactggctaacattaaccagattgtg
gatgtcttcatggagaacagtcttatccagcagtgcacgtcctttctgttggatgccctg
aaaaataaccgtcccgcggaaggccaccttcagactcgtctcctggaaatgaatttgatt
catgccccgcaggttgcagatgccattcttggaaaccaaatgtttacacactatgatcgt
gctcatattgcgcagttgtgtgaaaaggcaggcttgctccagcgagctttggaacactac
acagatctctatgatattaagcgtgctgttgttcatactcacctcctgaatcctgagtgg
cttgtgaacttctttggctctctctcagttgaagactctgtggagtgtttgcgtgccatg
ctgtcagcaaacattaggcaaaacctacagctctgtgtgcaagttgcttctaaataccat
gagcagcttggtacccagtcacttgtggagctttttgaatctttcaaaagctatgaagga
ctgttctattttttgggttccattgtaaacttcagccaggatccagacgttcacttcaaa
tacattcaggcagcttgcaagactggtcagataaaggaagttgaaagaatctgccgtgaa
agtaactgctataacccagaacgagtgaagaacttcctgaaggaggcaaagctcacagac
cagcttcctctgatcattgtttgtgatcgatttgactttgttcatgacctggtgctctac
ttataccgcaataacttgcagaagtatatagagatctatgtacagaaggtgaatcctagc
cgtataccagcagtggttggagggcttcttgatgtggattgttctgaagatgtcatcaag
aacttgatcatggtggttagaggccagttctcaacagatgagctcgtggctgaagtggaa
aaaagaaatcggcttaagttgctgttgccatggcttgaatcaaggattcatgaaggctgt
gaagaacctgcgactcataatgccttggccaaaatctacattgacagtaataataatcca
gagcggttccttcgtgagaatccttactatgacagccgtgtagttggcaaatattgtgaa
aagagagaccctcatctggcctgcgttgcttatgagagggggcaatgtgatctggaactc
ataaaggtctgcaatgagaactcactgtttaagagtgaggctcgctatctggtacgcagg
aaggaccctgaactttgggcaaatgttctggaagaaaacaacccattcaggcggcagctt
attgaccaggttgtccaaacagctttatcagagacgcaggatccagaggaggtttctgta
actgtgaaagctttcatgactgctgacctgcctaatgaactgattgagttattggaaaaa
attgtcttggataactctgtattcagtgaacacaggaatctccagaatctgctgatcctg
actgccattaaggccgatcgcactcgtgtgatggaatacatcaatcggctggataattat
gatgccccagatattgcgaatattgccatcagtaatgagctatatgaagaagcctttgct
atattcagaaaatttgatgttaatacttcagcagttcaggtgctgattgagcacattggc
aacttagatcgtgcttatgaattcgcagagagatgtaatgaaccagcagtatggagccag
ctagccagagcacagctccagaaggacttggtgaaagaagctattgactcttatataaag
gcagatgatccatctgcctacatggaagttgttcaagcagcaaatagaaatgataactgg
gaggacctagtcaagttcttacagatggccaggaagaaggctagagagtcttatgtagag
acggaacttatttttgctttagcaaaaactaatcgtctgtcagaactggaagagtttatt
agtggccctaataatgcccatatacagcaggttggtgaccgctgttatgaagaggggatg
tatgaagcggcaaaactgctctataacaacgtatctaactttgctcgcctggcatctacc
ttggtgcaccttggagagtatcaggcagcagtggacagtggtcgcaaagccaacagcaca
aggacttggaaggaggtatgctttgcctgtgtagatggaaaagaattccgcttggcacag
atctgtggcttacacatagtcatccatgctgatgaacttgaagagctgatcagttactac
caggatcgtggctactttgaagaactgattgcccttttggaagctgctttgggcttagag
cgtgctcacatgggaatgtttactgaacttgccatcttatactccaaattcaagcctcag
aaaatgagggaacatctggagctcttctggtctagagttaatattccaaaggtgctcaga
gctgcagaacaggctcatttgtgggcagaacttgtattcctctatgacaagtatgaggag
tatgacaatgcaataattactatgatgaatcatcccactgatgcctggaaagaagggcag
tttaaagacataatcgccaaggtggccaatgtagagctgtactacaaagccttgcagttc
tacttagactacaaacctctgctgatcaatgacctcctgcttgtattatctccacgattg
gatcataccaggacagtaaattttttctcaaaggttaatcagctacttctagtaaagcct
tatttgcgttcagtccagaaccacaacaacaaaggagttaatgaagctctaaacaacctt
ttaacagaagaggaagattaccagggtttgagagcttccattgatgcctatgacaacttt
gataacataacgttggctcagcgtctggagaagcatgaactaattgaatttaggcgtatt
gcagcatatttgtataagggtaacaaccgctggaaacagagtgtggagctatgcaagaaa
gaccgtctgtataaggatgctatgcagtatgctgcagagtccaaagatgcagaactagcg
gagaagctgcttcagtggtttctggaagaaggcaagcaggagtgctttgcagcctgcctt
ttcacgtgttatgacttgctgcacccagatgtagtccttgagttggcatggaggcataac
atcgtggactttgcaatgccttatttcatccaagtgatgagagagtaccttaccaaagtg
gataaacttgatgcttctgaaagcctaagaaaagaagaggaacaagtaactgaacccact
ccaatagtatttggccagcagttgatgctaacagcaggccccagtgcagtacctccccag
gcaaacttcccatatggatacacagcaccaggattcacccagccgcctgtttatggtttc
aatatgtaa
DBGET
integrated database retrieval system
