Phaethon lepturus (White-tailed tropicbird): 104624275
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Entry
104624275 CDS
T08325
Symbol
HDAC2
Name
(RefSeq) histone deacetylase 2
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet03082
ATP-dependent chromatin remodeling
plet03083
Polycomb repressive complex
plet04110
Cell cycle
plet04330
Notch signaling pathway
plet04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104624275 (HDAC2)
03083 Polycomb repressive complex
104624275 (HDAC2)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104624275 (HDAC2)
04350 TGF-beta signaling pathway
104624275 (HDAC2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104624275 (HDAC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plet03036
]
104624275 (HDAC2)
Enzymes [BR:
plet01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
104624275 (HDAC2)
Chromosome and associated proteins [BR:
plet03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
104624275 (HDAC2)
HDAC complexes
Sin3A-HDAC complex
104624275 (HDAC2)
BRAF-HDAC complex
104624275 (HDAC2)
REST complex
104624275 (HDAC2)
SHIP complex
104624275 (HDAC2)
MiDAC complex
104624275 (HDAC2)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
104624275 (HDAC2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
104624275 (HDAC2)
Chromatin remodeling factors
NuRD complex
104624275 (HDAC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
104624275
NCBI-ProteinID:
XP_010289906
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK
QMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASG
FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTG
DLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGD
RLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELP
YNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAV
HEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGEGGRRNVADHKKGAKKARIEED
KKETEDKKTDVKEEDKSKDSSGEKTDAKGAKSEQLSNP
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctcataggatccgcatgacccacaacttgctgctaaattatggcttgtacaga
aaaatggaaatttatcgaccccacaaagctactgctgaggaaatgaccaagtaccatagt
gatgaatatatcaaatttctccgatcaataaggcctgacaatatgtctgagtacagcaag
caaatgcagagatttaatgttggagaagactgtcctgtatttgatggcctgtttgagttt
tgtcagctgtcaactggaggctctgttgctggggcagtaaaattgaacagacaacagaca
gacatggctgttaattgggctggaggacttcaccatgccaagaaatcagaggcatctggt
ttctgttatgtcaatgatatcgtgcttgccatccttgagttactgaagtaccaccaaaga
gtcttgtatattgatatcgatatccatcatggtgatggtgttgaagaagcattttatacc
acagatcgtgtcatgacagtatcattccataagtatggtgaatattttccaggcacaggg
gacctcagggacattggtgctggaaaaggcaaatactatgctgtcaactttccaatgagg
gatggtatagatgatgaatcctatggacagatattcaaaccaattatatccaaagtaatg
gagatgtaccagcccagtgctgtggtattacagtgtggagcagattcactgtctggtgac
cggctgggatgctttaatcttactgttaaaggtcatgctaaatgtgtggaagttgtaaag
acttttaacttgccattgctgatgttaggaggaggaggatatactattcgtaatgttgct
cgatgctggacatatgaaactgctgttgccttagactgtgaaattcctaatgagttgcca
tacaatgactactttgagtatttcggaccagacttcaagcttcacattagtccttcgaat
atgactaatcagaatacaccagaatatatggagaagatcaagcaacgcttatttgaaaac
ttacgcatgttacctcatgcacctggggtacagatgcaggccattcctgaagatgctgtt
catgaagatagtggagatgaggatggagaagatccagacaaacgcatttctattcgagca
tctgataagcgcatagcctgtgatgaagaattttcagattctgaagatgaaggggaaggt
ggacgacgaaatgttgcagatcataagaaaggagcaaagaaagccaggatagaggaagac
aaaaaagagacggaggacaaaaaaactgatgttaaggaggaggataaatccaaggacagc
agtggtgaaaagacagatgccaaaggagcaaaatcagaacagctcagcaatccttga
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