Phaethon lepturus (White-tailed tropicbird): 104624864
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Entry
104624864 CDS
T08325
Symbol
TNRC6B
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plet03019
]
104624864 (TNRC6B)
03036 Chromosome and associated proteins [BR:
plet03036
]
104624864 (TNRC6B)
Messenger RNA biogenesis [BR:
plet03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104624864 (TNRC6B)
Chromosome and associated proteins [BR:
plet03036
]
Eukaryotic type
Gene silencing
piRNA pathway
104624864 (TNRC6B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
104624864
NCBI-ProteinID:
XP_010290636
LinkDB
All DBs
Position
Unknown
AA seq
1819 aa
AA seq
DB search
MEDKKRKKEDKKKKESAQKVTDQKTKVPEVTKPSLSQPVAASPIGNSPSPPVNGGNNAKR
VAVPNGQPPSAARYMPREVPPRFRCQQDHKVLLKRGQPPPPSCMLLGGGAGPPPPTAPGA
NPNNAQPVAGALLQGDSGTATDSAIGGAAASNYANSTWGPGASSSSGTNANPTHIWDKVI
VDGSDMEEWPCIASKDAESSSENTTDNNSASNPGLEKNALPGSTTSNKGKGSQCQSGSAG
NECNLGAWKSDPKAKSVQSSNAAAESNNGLGNWRNLSGQDRIGPSSGFSNFNPNSNPSAW
PALVQEGNSRKGTLESDSGSSNAQISTVGQTSREQQSKMENAGVNFVSGREQAQIHNTDG
PKNGNTNSLNLSSPNPMENKGMPFEMGLGNPSRSTDTPSQSTGERKTGSVGTWGTARGSS
GTDTVSGQSNSGNHGNNGKDREDSWKGASVQKPNGSRSDSWDNNNRSTGGGSWNFGPQHA
NESKWGEGNKLTSGVSQGEWKQLSGSDELKIGEWSGPNQPNSSTGAWDNQKGHPLPENQG
NSQAPCWGRSSSSAGSEVGGQSTGSNHKAGSSDSHNSGRRSYRPTHPDCQAVLQTLLSRT
DLDPRVLSNTGWGQTQIKQDTVWDIEEMPRPEGKSDKGTEGWESSATQTKNSGGWGDVPS
QSNQIKSGWGELSTPTEWKDPKNTGGWNDYKNSNSSNWGGGKPEEKSSSSWNDSSSKDQG
WGERQPSQGWSSGKNGWGEEVDQTKNSNWESAGNKPVSGWGEGGQNEIGTWGNGANTSAA
SKGGWDDCKRTSTWNETGRQPNSWNKQQQHQQQQQEASGSWGPPPQTPSNGRPPNPNWNS
GPQPAAPKEEEPSGWEEPSPQSISRKMDIDDGTSAWGDPSSYNYKNVNLWDKNSQGGQAP
REQSLPTPMTSKSQASVWSKSTPPAPDNGTSAWGEPNETSPGWGEVDDTGASTTGWGNAP
SNAPNAMKSSSKSMQDGWGESDGPVTGTRHSSWEEEEEGGVWNTAGSQGSSSSHNSTSWA
QGGKKTQMKCALKGGSSDSWMNPLSKQFSNMGLLSQTEDIPGSKMDLSVGGLPDKKFEVD
KRAMNLGDFNDMMRKDRSGFRPPNSKDMGTTDSGPYFEKLTLPFSNQDGCLGDEAPCSPF
SPSPSYKLSPSGSTLSNVGLGAIGSGLSPQNFAARQGGNHGLFGNSTAQSRGMHTPVQPL
NPSPNIRAQVPPQFLSPQVSASMLKQFPNSGLNPGLFNMGPQLSPQQIAMLSQLPQIPQF
QLACQLLLQQQQQQQLLQSQRKLSQAVRQQQEQQIARMVSALQQQQQRQPSMKHSPSHPV
GPKPHLDSMVPNPLNVGLSDLQTKGQIPGYGSGFGSSGMDYGMVGGEESGTEXXXXXXXX
XXXKQWTMMEGLPSVASQDANMHKNGAIVPPGKARGGSPYNQFDIIQGDPLGGHAGPAGD
SWLPAKSPPTNKIGSKSSNASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTATSPI
VDTDHQLLRDTTTGSNSSLNTSLPSPGAWPYSASDNSFTNVHSTSAKFSDYKSTWSPDPI
GHNPTHLSNKMWKNHISSRNTTGLPRPPPGLTNPKPSSPWNSTASRSVRGWGAQDSRLAS
ASTWSDGGSVRPSYWLVLHNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYNTKQ
EAAKAQTALHMCVLGNTTILAEFATDEEVSRFLAQAQPPTPAATPSAPTAGWQSLETGQN
QTDPVGPALNLFGGSTGLGQWSSGGGGGSSGGDLPGASLWGPPYSSSLWGVPSVEDPHRM
GSPAPLLPGDLLGGGSDSI
NT seq
5460 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagaaaaggaagaaagaggataagaaaaagaaggaatctgctcagaaggtc
acagatcaaaaaaccaaagtgcccgaagtgacgaaaccaagtttaagccaaccagtggct
gccagcccaattggcaactctccatcgccaccagtcaatggtggcaacaatgccaaaagg
gtggcagtgccgaacggacaaccgccaagcgccgcccgctacatgcctcgggaggtgccg
ccgcgattccgttgccagcaggaccacaaagtgttactgaaacgtgggcagccccctcca
ccatcctgtatgctccttgggggtggagcagggcctcctcccccaacagcaccaggagca
aacccaaacaacgcacaaccagtggcaggagcactgctgcagggcgacagtgggactgca
acagattcagcaattggaggtgctgctgcttcaaattatgcaaattctacttggggtcct
ggagcctcctccagcagcggcaccaacgccaacccaactcacatctgggacaaggtgatt
gtagacgggtctgacatggaagagtggccttgtattgccagcaaagatgctgagtcttct
tccgaaaacaccaccgataacaacagtgcctcgaaccctggcttggagaagaatgctctg
ccaggaagcaccactagtaacaaaggaaaaggaagccagtgccagtctggaagcgctgga
aacgaatgtaatcttggggcctggaaatctgatcccaaggctaagtctgttcaatcttcc
aacgctgctgccgagagtaacaatggactaggtaattggaggaacttgagtggtcaagat
agaatcggtcccagttccggcttcagcaactttaacccaaatagcaacccatctgcttgg
ccggcactggttcaagagggcaattctaggaaggggactctggaatctgatagtggtagc
tccaatgcacagattagcacagtaggtcagacctctagggaacagcagtcaaagatggaa
aatgcgggtgttaactttgtctctggcagagaacaggctcaaattcataacactgatgga
ccaaaaaatggaaacactaactccttgaacttaagttcaccaaaccctatggagaataag
ggaatgccctttgaaatgggcttggggaacccttccaggagcactgacaccccttcacaa
agcactggagaaagaaagactgggagtgttggaacttggggtacagctagggggtcttct
ggaactgacacagtctctggacagagcaattctggaaaccatgggaacaatggaaaggat
agagaggactcctggaaaggagcttctgttcaaaaacctaatgggtcaagaagtgattct
tgggataacaataaccggtctacgggtggtgggtcttggaactttggccctcagcatgca
aatgaaagcaaatggggtgaagggaacaaattaacatctggggtctctcagggagaatgg
aaacagctgtctgggtctgatgaactgaagattggagaatggagtggtccaaaccaacca
aattctagcactggagcatgggacaatcaaaaaggccaccctcttcctgaaaaccaaggc
aattcccaggctccctgttggggcagatcttccagctctgcaggaagtgaggttggaggt
caaagcactggaagcaaccacaaagcaggaagtagtgacagtcacaattctggacgccga
tcatataggcctacgcatcctgattgccaggcagtcttgcagactttgctgagcaggact
gatttggacccccgagtgctttcaaacaccggctggggccaaactcaaattaagcaagat
acagtgtgggatatcgaagagatgccacggcctgaggggaagtctgataaaggaactgag
gggtgggagagctctgccacacagacaaagaactcagggggctggggcgatgtacccagc
caaagcaatcaaatcaagtctggatggggtgagctctcaaccccaacggagtggaaggac
cccaaaaatactggaggatggaatgactataagaactccaattcttctaattggggagga
ggaaaaccagaagaaaaatcatcttcctcttggaatgacagctctagtaaggatcagggg
tggggtgaacggcaacctagtcaaggatggtcttctggaaagaacggttggggagaggaa
gttgaccaaacaaaaaacagcaactgggaaagtgcgggaaacaagccagtgtctggttgg
ggtgaaggtgggcaaaatgagattggaacttggggtaatggtgcaaatacaagcgctgct
tcaaagggtggatgggatgattgtaaaagaacttcaacatggaatgagacgggtcgacag
cccaactcctggaacaagcagcagcagcaccagcagcaacagcaggaggcttctggttcc
tggggtccaccacctcaaactccaagtaatgggcgacctccaaacccaaactggaacagc
ggaccacagccagctgcccccaaagaggaggagcctagtggctgggaagaaccttctcca
cagtcaatcagtcgaaaaatggatattgatgatggcacttcagcatggggagatcctagc
agttataactacaagaatgtgaacctgtgggacaagaactcacaaggaggccaggcccca
cgggagcagagcctgcctactccaatgactagcaaatcacaagcatcagtctggagcaaa
agcactccacctgctccagataatggtacgtccgcctggggtgagccaaatgaaaccagt
cctgggtggggtgaagtagatgatacaggagcatcgacaacaggctgggggaatgcacct
tccaacgccccgaatgccatgaaatctagttctaaatctatgcaagatggctggggagag
agtgatgggccagtgacaggaacacgtcattccagctgggaagaggaggaggagggagga
gtctggaacacagcaggctctcagggaagcagttcctcccacaactcaacaagctgggca
caaggaggaaagaaaacacaaatgaagtgcgcattaaaaggaggaagtagtgattcgtgg
atgaaccctttatccaaacaattttcaaatatgggcttgctaagtcaaactgaggacatt
ccaggcagtaaaatggacttgtctgtaggtggtctcccagataagaagtttgaggtagat
aaacgagccatgaatctcggggactttaatgacatgatgagaaaggatcgatctgggttc
cgtccacctaattccaaagacatgggaaccacagatagtgggccttattttgagaagctg
actttgcctttctccaatcaagatgggtgccttggggatgaggctccctgctctcccttc
tccccttctcccagctacaagctgtctccctctggttctacactatccaacgtcggcctt
ggggcaatcggctcagggctcagtccccaaaacttcgctgctagacaaggtggcaatcat
ggtttgtttggaaacagcacagcacaatcgaggggcatgcacacaccagtgcagccacta
aatccttcccccaatatccgggcgcaagtgcctccccaatttctttctccccaggtttca
gcctccatgctcaaacagtttcccaacagtggcttgaatcctggtcttttcaatatgggc
ccccagctttctccacaacagattgccatgctgagccagcttccacagattccccagttt
caattagcatgtcagctccttcttcagcagcaacagcagcagcagctgttacagagccag
aggaagttatctcaagctgtgcgacaacagcaggagcaacagattgctcgtatggtgagt
gccctgcagcagcagcagcagaggcagcctagcatgaagcattcaccatcccaccctgtt
gggcctaagccacatttagacagcatggtacccaatcctttgaatgtgggtctctcagat
ttacagaccaaagggcaaatacctggatacggttcaggctttggctcaagtggcatggat
tatggaatggtgggaggggaagagtctggaacagaaannnnnnnnnnnnnnnnnnnnnnn
nnnnnnnntaagcagtggactatgatggaagggctgccctctgtggcttcacaagatgcc
aatatgcacaaaaacggtgcaatagtgccccctggaaaggctcgcggaggatcgccctac
aaccagtttgacataattcagggcgacccactaggtggccatgcaggccctgctggtgat
agttggttacctgccaaatctccaccaacgaacaagatcggaagcaaatccagcaatgcc
agctggcctccagagttccaaccaggagtgccatggaaaggtatacaaaacattgaccct
gaatctgacccctatgtgacccctggaagtgtgctgggggggacagccacatctcccatt
gtagatactgaccaccaacttctgcgggacaccaccacagggtctaattcttccctcaac
acctcgctgccttcacctggtgcctggccctacagtgcctctgacaattccttcaccaac
gttcatagcacttcagcaaaattcagtgattacaaatcaacgtggtccccagatcccata
ggacacaatcccactcatctctccaacaagatgtggaaaaaccatatttcctcaaggaac
actacagggctgccccgcccacctcctggcctgaccaaccccaaaccatcatctccatgg
aacagcacagcatcccgatcggtcaggggctggggggcacaggactcaaggcttgcctct
gcatctacttggagtgatggtgggtcagttcgtcctagctactggctggttcttcataat
ctcactccacagattgatgggtcaaccttgaggacgatctgcatgcagcatggcccactg
ctgacattccatctgaacctgacccagggcaccgcccttatccgatataacaccaaacag
gaggcggccaaggcccagactgcactgcacatgtgtgtgttgggaaacactaccatcctg
gctgagtttgccacagatgaagaggttagtcgctttctggcacaagctcagccccctaca
cctgcagcaaccccaagtgcacccacagcaggctggcaatccctggagacaggacagaac
cagacagatccagttggacctgctttgaatctctttggtgggtcaacagggcttgggcag
tggagcagtggtggcggcggtggcagcagtgggggtgatctccctggcgcttcgttgtgg
ggacccccatattcttcaagcctgtggggggtcccaagcgtagaggatccacacagaatg
ggcagccctgctcccttactacctggagaccttctgggaggagggtcggattcaatctga
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integrated database retrieval system
