Phaethon lepturus (White-tailed tropicbird): 104625308
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Entry
104625308 CDS
T08325
Symbol
PKD2L1
Name
(RefSeq) polycystic kidney disease 2-like 1 protein
KO
K04990
polycystin 2L1
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
plet03037
]
104625308 (PKD2L1)
04040 Ion channels [BR:
plet04040
]
104625308 (PKD2L1)
Cilium and associated proteins [BR:
plet03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
104625308 (PKD2L1)
Ion channels [BR:
plet04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104625308 (PKD2L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
104625308
NCBI-ProteinID:
XP_010291205
LinkDB
All DBs
Position
Unknown
AA seq
852 aa
AA seq
DB search
MSTSCLNNRAESHFGASEEHELEALGKKAWDNPVYNGSPSTSLKIRAIYNPKSILENPYE
NFEEVGDPLPYQEEQSKAVHGKTSPFLRCCFYIFRGIRGLWGTTLTENTAENRELYVKTT
LRELLVYIVFLVDICLLTYGMTSSNAYYYTKVMSELFLQTSTDGRVSFQSISSMADFWVF
AQGPLLDNLYWTKWYNNESLAAHGTQSYIYYENLLLGVPRMRQLKVKNNSCVVHDDFKEE
ISGCYDVYSEDKEERMSFGLINGTAWRYHSEEELGGSSHWGRLTSYSGGGYYIDLKLTRE
ESAEALQVLKEKRWLDRGTRVVFVDFSVYNANINLFCVLRLVVEFPATGGAIPSWQIRTV
KLIRYVSAWDFFIIACEIVFCVFIFYYVVEEILELRIHKLQYFTSIWNILDVVVILLSIV
AIGFHIFRTIEVNRLLGELLKHPDTYADFEFLAFWQTQYNNMNAVNLFFAWIKIFKYISF
NKTMTQLSSTLARCAKDILGFAIMFFIVFFAYAQLGYLLFGTQVENFSTFVKCIFTQFRI
ILGDFDYNSIDNANRVLGPIYFVTYVFFVFFVLLNMFLAIINDTYSEVKEELSSQKDELQ
LSDILKQSYNRTLMRLKLKKERISDVQKALQNGTKELDFEDFKNSLKELGHADHEITAAF
SRFDKDGNHILDEEEQQQMKHDLEAKRVALNTEIENLGKSYDDNNLDENLTYMEARNNHA
NMASWVSKEEFQVLLQRVLQLEQSINIIGSKIDAVVNKLDVLERNKLKRKDLLGKPLDNV
SKEEEPSQEELLPQSLDQLGKEAAESWGMECVQANNLSGSSSQNGVYSILPRSSVPGSQV
PKNIQVQSDVRF
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgtcttgcctaaacaacagagccgagagccacttcggagcttcagaggagcat
gaactggaagcattggggaagaaagcttgggacaatcctgtttacaatggctctccctct
acctccttgaagattcgagccatctacaaccccaagtccatcctggagaatccctatgag
aactttgaagaggtgggggatcctctgccctaccaggaagagcaaagcaaagctgtgcat
gggaagacaagtcctttcctcaggtgctgcttctacatcttcagaggcatccgaggtctg
tggggcaccacgctgactgagaacacagctgaaaacagagagctttatgtaaagaccaca
ctgcgagagctgctggtctatattgtgttcttggtggacatctgtctgctgacatatgga
atgacaagttccaatgcctattactacaccaaagtgatgtctgagctcttcctgcagacc
tctacagatggccgtgtctccttccagtccatcagtagcatggctgacttctgggtgttt
gcacaagggccccttctggataatctttactggacaaagtggtataacaacgagtccctg
gcagcgcatggcacacagtcatacatctattacgagaacctgctacttggtgtcccacgc
atgcgacaactgaaggtgaagaacaattcctgtgtggtccatgatgacttcaaggaggaa
atatcaggctgctatgatgtatactcagaagacaaggaagaaaggatgtcctttggactc
atcaatggaacagcgtggaggtaccattctgaggaggagctgggtggctcatctcactgg
ggaagactaaccagttacagtgggggaggatactacatagacctcaagctgaccagagaa
gagagtgctgaagccctgcaagtcttgaaggagaagcggtggctggatcgggggacacga
gttgtctttgttgatttctctgtgtataatgcaaacatcaatctgttctgcgttctgagg
ttagtggttgagtttccagccactggtggtgccattccttcctggcaaatccggacagtc
aagcttatacgatatgtcagcgcatgggacttcttcatcattgcctgtgaaattgtcttc
tgtgtcttcatcttctactatgtggtggaggagattttggagctgcgtatccacaagctt
cagtacttcaccagcatctggaacattctggatgtggttgtcattctgctctccatcgtc
gctattgggtttcacatctttcgcaccattgaggtgaacaggctgttgggagagttgctg
aaacaccctgatacctacgcagacttcgagttcctggcattctggcagacacagtacaac
aacatgaatgcagtcaacttattctttgcctggatcaagatattcaagtatattagcttt
aacaaaacaatgacccagctctcctccacactggcacgttgtgccaaggacatcctgggc
tttgccattatgttcttcattgtcttctttgcctatgcccagctgggttaccttcttttt
gggacacaagtggaaaacttcagtacctttgttaaatgcatcttcacccagtttcggatc
attcttggtgattttgactacaattccattgacaatgccaacagggtccttgggcctatt
tacttcgtcacctatgtgttctttgttttctttgtgctgctgaacatgtttctggccatc
atcaatgacacctactcagaagtcaaggaggagctttcaagccagaaggatgagctgcag
ctctcagacatcttgaagcagagctacaaccggacgctcatgaggctgaagctgaagaag
gagaggatttctgacgtgcagaaggcactgcagaatggaacaaaagaattggactttgaa
gacttcaagaacagcttgaaggaattgggccatgcagaccatgagatcacagcagccttc
tccaggttcgacaaagatggtaaccacatccttgatgaagaggagcaacagcagatgaag
catgacctagaagcaaaaagggttgctctgaatacagagattgaaaatttgggaaaatcc
tatgatgacaacaacctggatgagaatctgacctacatggaagcaagaaataaccatgcc
aatatggccagctgggtctccaaagaagagttccaagtcctcctgcaacgtgtgctgcag
ctggaacagtccataaacatcattggctccaagattgatgcagtggtgaacaagctagat
gtgctggaaagaaacaagttgaagaggaaggacctgttgggcaagccactggataatgtt
agcaaggaggaagaacccagtcaggaagagctgctcccccagagcctagaccagctgggg
aaagaagcagcagaaagctggggaatggaatgtgtacaggcaaacaacctgagtggcagc
tcttcccaaaatggggtctactctatcttgcccaggtcaagtgtgccgggatctcaggtg
cccaagaacatccaggtgcagtctgatgtgcgcttctag
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