Phaethon lepturus (White-tailed tropicbird): 104628224
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Entry
104628224 CDS
T08325
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plet03036
]
104628224 (CHD9)
Chromosome and associated proteins [BR:
plet03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104628224 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
BRK
Helicase_C
Chromo
ResIII
HDA2-3
DEAD
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
104628224
NCBI-ProteinID:
XP_010295038
LinkDB
All DBs
Position
Unknown
AA seq
2422 aa
AA seq
DB search
MSSVKRPRGRPPSSKKTDGSGSYTKLQNTQVRAMSEKKQKKKADSESKQEKANRIISEAI
AKAKERGERNIPRVMSPENFPSVSAEGKEEKKGRKVKSKPKDKESKKPKTGSSSKIKEKT
KIGKLIITLGKKQKRKNESSDELSDAKQTPQRPLKDEDSQKRRSNRQVKRKKYAEEGEGK
QSEEEAKVSVKIKKNSAPLPAEQPLQLFVENPSEEDAAIVDKILSSRVIKKEMSAGMTVE
TEEFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDY
VEVDRVLEVSLCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRP
DSRRLDRPPPNSWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKT
IQSITFLYEILLAGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSMISRQMIQQYE
MYFRDSQGRIIRGTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEG
LKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFHAESTFMQEFGDLKTEEQVQKLQA
ILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPN
LVNTMMELRKCCNHPYLIKGAEEKILGEFKETYSPSAPDFHLQAMIQSAGKLVLIDKLLP
KMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRF
VFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSY
EREMFDRASLKLGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGS
KFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEI
DIDAISGRNSLVIDTPRIRKQTRPFSATKDELAELSEVESEGDDKPKLRRPCDRSNGYGR
TECFRVEKNLLVYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSF
IWDLITPTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQ
DEGYKKHIKHHCNKVLLRVRMLYYLKQEVIGNEFQKVFDGIDASEIDVWVPEPDHSDAPA
EWWDADADKSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYIDGDV
EDPEYKPAPAMFKDDIEDDVSSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAY
QRTSKNRQAQQIQPAFPIQTSMMQPPYEEAALNPKMAAKIERQQRWTRREEADFYRVVST
FGVVFDPERGRFDWTKFRAMARLHKKTDESLEKYLYAFMSMCRRVCRLPSKEELVDPNIF
IQPITEERASRTLYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLL
GAAKHGVSRTDYHILRDPELSFMSAQRNYNQNKVALSRTSTPLLHQYQMALSASPLTPQS
RLSDAKVNALEDTKAKNENLKEDPQSSEEESMSTEETQTIMKSEPLSPKNGTPIQNTDHK
ASMKTETDRRMVAARTEPLTPNPASKKQRVSKRGSDSSSDSDSDSDRSSCSSRSSSSSSS
SSSSCSHSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSDEEEAQKREGTPH
IKAYDEESVASLSTTQDETQDSFQMNNGTPNSSYILQGGYMLAASYWPKDRVMINRLDSI
CQTVLKGKWPSARRSYDSNTVASFYTTKLLDSPGAAADYSEPSVPTPPLAGVKEEYDQSP
QMSKVKKHVREKEFTVKINDEGGLKLTFQKQGLSQKRPFESEEGALGQQQYLARLRELQN
ASETSLVNFPKSLPKSGTSSHLTACANGVIVDSQPAVKKRRGRRKNVEGVDVLFMNRNKQ
PNHVNPGINSCQVAAGINPALTYTQSQGMLDAESPVPVINLKDGTRLAGDDAPKRKDLER
WLKEHPGYVEDSGACIPRMQLHDGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARK
VGGAFAPPLKDLCRFLKENPEYGVAPEWGEVVKQSGFLPEGMFDRILTGPVVREEVSRRG
RRPKSEIAKATAAAAAATAASVSVNPLLANGLLPGVDLPSLQALQQNLQNLQSLQVTAGL
MGMPAGLTTGGEAKNVAAMFPMLLSGMAGLPNLLGMGGLLTKSTESISEEKKGSDSKEAD
IKKERTEDQNTDTGGENSVSSSPSTSSAAAAANPLSLNPLLLSNILYPGMLLTPGLNLHI
PALSQSNVFDVQNSESNDTGSAKPTEEKEENCRVRDQEDKGGTEPSSHNENSTDEGSEKA
DASSGSDSTSSSSEDSDSSNED
NT seq
7269 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagtgaagaggccgaggggaaggcctccttcctccaagaagactgatggttca
ggatcatatactaagttgcagaatacccaggtgagggcaatgtctgaaaagaagcagaag
aaaaaagcagactcggaaagtaaacaagagaaggcaaatcgcataatatctgaagcgatt
gcaaaagcaaaagagagaggagagagaaacattccacgagtaatgagtcctgagaacttc
cccagtgtttcagctgaaggcaaagaggaaaagaagggtagaaaagttaaatcaaaacca
aaggacaaggagagcaaaaaaccaaaaactggttcctcgtccaaaattaaagagaaaaca
aaaattggaaagctaatcatcacactgggtaaaaagcagaaaagaaaaaatgaatcttca
gatgaattgtctgatgctaagcagactccacagcggccgttgaaagatgaagactcacag
aagagaagatcaaatcgtcaagttaaaaggaaaaaatatgctgaagaaggagaaggcaaa
caatcagaagaagaagctaaagtatctgtgaaaatcaaaaagaattctgcccctttacct
gctgaacagcctttacaattatttgtggaaaatccaagtgaagaagatgcagcaattgta
gacaaaatcttatcctccagggtaataaagaaagaaatgtctgctgggatgacagtagaa
acagaagagttttttgtaaaatacaagaactactcttatctccactgtgagtgggccaca
gaacaacagcttttaaaggataaaagaatccagcaaaaaataaaacgattcaaactaagg
caagcacaaagagctcacttttttgcagatatggaagaagaaccttttaatcctgactat
gttgaagtagatcgggtattagaagtatctctttgtgaagataaggacactggtgagcct
gttatttactatttagtaaaatggtgttcattgccatatgaagacagtacgtgggagctg
aaagaagatgtagatcaagcaaaaatagaagaatttgaacaattgcaagcttccaggcct
gactcaaggagattggaccgaccacctccaaactcctggaagaagatagaacagtccagg
gaatataaaaatggcaatcagctcagggaatatcaactggaaggacttaactggctccta
ttcaactggtacaataggcggaattgcattttagcggacgaaatgggtcttggcaaaacc
attcagtcaattacattcctgtatgaaatcctcctggctggtataagagggccttttctg
atcatagctccgctttccactataacaaactgggaaagagaatttcgcacgtggactgac
cttaatgttgtagtgtatcatggaagtatgatcagcaggcagatgattcagcagtatgaa
atgtacttcagggactcccagggacgtatcattcgaggtacctacagattccaagccatt
atcacaacttttgaaatgattcttggtggatgtccagagttaaatgccattgaatggcgg
tgtgttattattgatgaagctcacagactgaagaacaaaaattgcaaactcttggaagga
ctgaaattaatgaaccttgagcataaagtgctgttaacgggtaccccactgcagaacacc
gtagaggaattatttagccttcttcattttcttgaaccgttgcgttttcatgctgaatct
acattcatgcaagaatttggagaccttaaaacagaggaacaggttcagaaactacaagcc
atcctgaaacccatgatgctcagacgattaaaggaagatgtagaaaaaaagctggctccg
aaggaggaaactataattgaagtagaactaactaatattcagaagaaatattatcgagca
atcttggagaaaaattttgcttttttatccaaaggagcagggcaagcaaatgtacccaat
ctggttaacactatgatggaactcagaaagtgttgtaatcacccttatctcatcaaaggt
gccgaagagaaaatccttggagagtttaaagaaacgtatagcccaagtgctcctgacttc
catctacaagcaatgatccagtctgctggtaaattggttcttattgataaacttcttcca
aaaatgaaagcaggaggccacaaggtccttatcttttctcaaatggtgcgctgccttgat
attttggaggattaccttatacataaaagatacttatatgaacgaattgatgggcgagta
cgagggaatctcagacaagctgccattgaccggttcagcaaaccagattccgatcgcttt
gtcttccttctgtgcaccagagctggtggcttgggcattaatttgactgcagcagataca
tgtatcatttttgattctgactggaatcctcaaaatgatctgcaggctcaagcccgttgt
cacaggattggtcagaacaaagcagtgaaggtctacagactgataacgcgtaactcctat
gaaagagagatgttcgacagagcaagtctgaaactgggactggataaggctgtcttacag
agtatgagtggaagagaaaacagtgttggtggtatccagcaactctccaaaaaagaaata
gaagatttgcttcgaagaggtgcatatggtgccattatggatgaagaagatgaaggctct
aaattctgtgaggaagacattgaccaaattttgcagcgtcgtactaaaaccatcacgatt
gaatcagaaggaaggggctccacttttgccaaggctagttttgttgcgtctggaaacagg
actgatatttcacttgatgatcccaatttctggcagaaatgggcaaaaaaagcagaaata
gatatcgatgctatcagtggtagaaacagcctggttattgataccccaagaattaggaaa
caaacgcggcccttcagtgctacaaaagatgagctggctgagttgtctgaagtagagagc
gagggtgatgataaaccaaaactccgcaggccttgcgaccgttccaatggatatggaaga
acagagtgttttcgggtggaaaaaaacttgctggtctatgggtggggtcgatggagagaa
attttgtcacatggtcgcttcaagagacagctgaatgaacaggatgtggagataatttgc
cgagctctgttagcctattgtcttgttcactacagaggggatgagaaaataaaaagtttt
atatgggatctcattaccccaacagaggatggacaaacacgagagttacaaaatcacctt
ggcttatcagcccctgtgcctagaggaagaaaaggaaaaaaggtgaagacccaggctagc
acttttgatatacacaaagcagaatggcttcgaaaatacaatccagaacatctgttgcaa
gatgaaggatacaaaaagcacataaaacaccattgcaacaaggttttgcttcgagtaaga
atgctgtattacttaaaacaagaagtcattggtaatgaattccaaaaggtgtttgatgga
attgatgccagtgaaattgatgtttgggtccctgagccagatcactctgacgctcctgct
gagtggtgggatgcagatgcagataagtccctcctaataggagtttttaaacacggttat
gaaaaatacaacactatccgagcagacccagcactgtgcttcttggaaagggttggcaag
ccagatgaaaaagcagttgctgctgaacagagagcaaatgattatattgatggggatgta
gaagatccagaatataaaccagcaccagcaatgtttaaagatgacatagaggatgatgtt
tcatccccaggtgatctagtaatagcagatggagatggacaaatgatggaaggagacaaa
atctattggcccactcagtctgccttaacaacacgtcttcgccgcctaataacagcttat
caacgaacaagtaaaaataggcaggcccagcagatccagccagcattcccaatacaaact
agtatgatgcagcctccatacgaagaagctgctctaaatccaaagatggctgctaagatt
gaaagacagcaaagatggacgagaagagaagaagctgacttttacagagttgtgtccaca
tttggagtggtgtttgatcctgaaaggggacgatttgactggaccaaatttagagcaatg
gctagactgcataagaaaactgatgagagcttagagaagtacttgtatgcatttatgtca
atgtgccggagagtctgtcgtctcccatcaaaagaagaactcgtagacccaaacattttt
atccaaccgattacagaggagcgtgcttctcggactttgtatcgcattgaactcctaagg
aaagtgcgagaacaggctcttagacacccacagttgtttgaacgactaaaactgtgccag
ccaaacccagacttacctgtctggtgggagtgtgggacacatgacagggacttacttctt
ggagctgctaaacatggagttagcaggacagattatcatattcttcgtgatcccgaactc
tcatttatgtctgcccagcggaattataatcaaaataaagtggcgctctcaaggacttct
actccactcttgcatcagtatcaaatggcgttatctgcttctcctctcacacctcagtca
agattgtcagatgctaaagtgaatgctttagaggacacaaaagctaaaaatgaaaatctg
aaggaggaccctcagtcttctgaagaggagtctatgtctacagaggagacacagacaata
atgaaatctgaacccttgagtccaaaaaatggcacaccaatacaaaacacagaccacaaa
gctagcatgaagactgaaacagacaggcgcatggtggcagcaaggacagagcctctaact
ccaaacccagcttccaaaaaacagagagtcagcaaaaggggttctgactctagctctgac
tcagactctgactcagacagatcatcctgttcttccaggtcatcatcttcatcttcgtcg
tcttcctcatcttgttcacactctcgatcaggctctagctcttcatcatcttcatcttgt
tcttctgcatcttcatcctcctcctcctcatcctcgtcatcatcgtcgtcatcatcatca
tcatctgaagagagtgatagtgatgaagaggaggcacaaaaacgtgaaggaaccccgcat
ataaaagcctatgatgaagagagtgtagcctctctgagtacaacacaagatgagacgcaa
gacagtttccagatgaacaacgggacaccaaattccagttatatcctacaaggtggctac
atgttggctgcatcctactggccaaaggatcgagtcatgattaatcgacttgacagtatt
tgtcagacagtgttgaaaggtaaatggccttcagcaagaaggagctatgacagcaatacg
gtggcatctttctacacaaccaaacttctggatagcccaggtgcagctgcagattacagc
gagcccagtgtaccaacaccccctcttgcaggtgttaaagaagaatatgatcaatcacca
cagatgtcaaaggtgaagaagcatgtacgagaaaaggagtttacagtgaaaatcaatgac
gaaggtggtttgaaattgacttttcagaagcagggactgtctcagaaaaggccatttgaa
agtgaggaaggtgcactggggcagcagcaatacctggctcggctacgtgaactccagaat
gcttcagaaaccagtcttgtcaacttcccaaaatcacttcccaaatcaggtacttccagt
cacttaacagcctgtgccaatggagtcatagttgacagtcagcctgcagtcaaaaagaga
agaggaagaaggaagaatgtggagggagttgatgtcctctttatgaatagaaataaacag
cctaatcatgttaatccaggtattaactcctgtcaagttgctgcaggaataaacccagca
ctcacttacacgcagtcccaaggcatgcttgatgcagagagtccagtccctgttattaac
ctaaaagacggaacaaggcttgcaggtgatgatgcacccaaaagaaaagatttagaaagg
tggcttaaagaacatcctggatatgttgaagactcaggagcctgtattcctaggatgcag
ctgcacgatgggaggcccaaacaaaaaagacaccgttgtcgaaaccctaataaactggat
gttaatagtttgactggtgaagaacgtgttcagcttataaatagaagaaacgcaagaaag
gtggggggtgcgtttgctcctcctctgaaggatttgtgcaggttcttgaaagaaaatcca
gagtatggagtggctcctgaatggggcgaagttgtaaaacaatctggatttcttccagaa
ggtatgtttgaccgcattctcactggacccgttgtgcgggaagaagtaagccggagagga
agacgccccaaaagtgagattgctaaggcaacagcagctgcagcagctgccacggctgca
agcgtatcagttaaccctctgctagctaacggattgcttccgggagtggatctgccgagt
cttcaggccttacaacaaaacctgcaaaacctgcagtcgctgcaggtaacagcaggatta
atgggaatgccagctggcttaactactggaggagaagctaagaacgtggctgccatgttc
cccatgctgctgtcagggatggctggattaccaaacttgctgggcatgggaggacttcta
acaaagtctacagaatctatttcagaggaaaaaaagggaagcgattcaaaggaggcagat
ataaagaaagaaaggacagaagaccaaaatacggatactggtggtgaaaactctgtttca
agttctccgtcaacatcctctgctgctgcagctgccaatcctctctctcttaacccatta
cttttgtccaacatactttacccagggatgcttctcactccaggccttaatcttcatatc
ccagctttgtctcagtctaatgtttttgatgtacagaacagtgaaagcaatgacacaggc
tcagccaagcccacagaagaaaaggaggaaaattgtagggttagagatcaggaagacaaa
gggggaacagagccaagctctcacaatgaaaacagcacagatgagggttcagagaaagca
gatgcttcatctggatctgatagtacatcgtcttcatctgaggattcagattctagcaat
gaagactga
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integrated database retrieval system
