Planctomyces sp. SH-PL62: VT85_07280
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Entry
VT85_07280 CDS
T04401
Symbol
rpsA_2
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
plh
Planctomyces sp. SH-PL62
Pathway
plh03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
VT85_07280 (rpsA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
plh03011
]
VT85_07280 (rpsA_2)
Ribosome [BR:
plh03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
VT85_07280 (rpsA_2)
Bacteria
VT85_07280 (rpsA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_2
Spt6_S1
PCB_OB
CsrA
Trypan_PARP
Motif
Other DBs
NCBI-ProteinID:
AMV37217
UniProt:
A0A142YDF8
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Position
1892512..1894395
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AA seq
627 aa
AA seq
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MVDRNLLREFDVNEDELAAVITAEDGSKTLDDFLGEGQNFEIGGIVSGKVIEIVGDQVVV
DVGYKSEGLVSLNEWEDEPAPVPGDEVEVLLEGMEDETGEIVLSRKKAHRMRAWEMVISK
YHEGDVVKGKVTRKIKGGLLVDIGVNVFLPASQVDIRRPSDIADFIDQEIECMILKIDES
RRNIVVSRRKLIEITREQQKKALLEEIAERQIRKGTVKNIADFGAFVDLGGIDGLLHITD
MSWGRINHPSDMLKIDDQIEVMVLHVDKEREKIALGLKQKSASPWENVADKYPVTTRVVG
EVVNVMSYGAFVKLEEGIEGLVHISEMSWTKRINHPSELVNTGDKIEVVVLGINKDKQEI
SLGMKQTQVNPWDQVANKYPPGTMVEGTVRNLTNYGAFIEIEEGIDGLLHISDMSWTRKI
GHPNEVLEKGQRISCQVLNVDQDRKRIALGLKQLKEDPWETDIPGRYEPNDVVKGKVTKL
TNFGVFVELEPGLEGLLHISELADHKVDSPEEVVKVGDEIEVKILRVDRGERKIGLSRKK
AHWSGREDEEGEATSEGGELSTTAPKESKENKELKGGLGGGGPLFSMGGTTPAEPEPTPE
PEPEAAAEPEAEAEAEPETEAEAETEG
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggtagatcgcaacctccttcgtgaattcgacgtcaacgaggacgaactggccgccgtg
atcacggcggaggacggctcgaagaccctcgacgacttcctgggcgaaggccagaacttc
gagatcggcgggatcgtctcgggcaaggtcatcgagatcgtcggcgatcaggtcgtcgtc
gacgtgggatacaagtccgagggtctggtctcgctcaacgagtgggaggacgagcccgcg
ccggtccccggcgacgaggtcgaggtcctgctcgaaggcatggaggacgagaccggcgag
atcgtcctgtcgcgcaagaaggcccaccggatgcgggcctgggaaatggtcatctccaag
taccacgaaggcgacgtggtcaaggggaaggtcacccgcaagatcaagggcggcctgctg
gtcgacatcggcgtcaacgtcttcctgcccgccagccaggtcgacatccgccgcccgtcc
gacatcgccgacttcatcgatcaagagatcgagtgcatgatcttgaagatcgacgagtcc
cgccgcaacatcgtggtcagccgccgcaagctgatcgagatcacccgcgagcagcagaag
aaggccctgctcgaggagatcgccgagcgccagatccgcaaggggacggtcaagaacatc
gccgacttcggcgcgttcgtcgacctcggcggcatcgacggcctgctgcacatcaccgac
atgagctggggccgcatcaaccatcccagcgacatgctcaagatcgacgaccagatcgag
gtgatggtcctccacgtcgacaaggaacgcgagaagatcgccctgggcctcaagcagaag
agcgcgagcccctgggagaacgtcgccgacaagtacccggtcaccacccgcgtcgtcggc
gaggtggtcaacgtcatgtcctacggcgccttcgtcaagctggaagagggcatcgagggc
ctggtccacatctccgagatgagctggaccaagcggatcaaccacccgagcgagctggtc
aacaccggcgacaagatcgaggtcgtcgtccttggcatcaacaaggacaagcaggagatc
tcgctcggcatgaagcagacccaggtcaacccctgggaccaggtcgccaacaagtacccg
ccgggcacgatggtcgagggcaccgtccggaacctcaccaactacggcgcgttcatcgag
atcgaggagggcatcgacggcctcctgcacatctccgacatgagctggacccgcaagatc
ggccaccccaacgaggtgctcgagaagggccagcggatcagctgccaggtgctcaacgtc
gaccaggaccgcaagcgaatcgccctgggtctcaagcagctcaaggaagacccgtgggag
accgacatccccggccgctacgagcccaacgacgtcgtcaagggcaaggtcacgaagctc
accaacttcggcgtcttcgtcgagcttgagccgggcctcgaaggcctgctccacatctcc
gagctggccgaccacaaggtcgacagccccgaagaggtggtcaaggtcggcgacgagatc
gaggtcaagatcctccgggtcgaccgcggcgagcgcaagatcggcctctcccgcaagaag
gcccactggtcgggccgcgaggatgaggaaggcgaagccacctccgagggcggcgaactc
tccacgacggctccgaaggagtccaaggagaacaaggaactcaagggcggcctcggcggc
ggcggccccctcttcagcatgggcggcaccacgccggccgaacccgagcccacgcccgag
cccgagcccgaggccgcagccgaacccgaggctgaagccgaagccgagcctgagaccgaa
gctgaagccgaaaccgaaggctga
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