Pseudomonas lijiangensis: KQP88_05995
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Entry
KQP88_05995 CDS
T08713
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
plij
Pseudomonas lijiangensis
Pathway
plij00300
Lysine biosynthesis
plij01100
Metabolic pathways
plij01120
Microbial metabolism in diverse environments
plij01230
Biosynthesis of amino acids
Module
plij_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KQP88_05995 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
plij01002
]
KQP88_05995 (dapE)
Enzymes [BR:
plij01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
KQP88_05995 (dapE)
Peptidases and inhibitors [BR:
plij01002
]
Metallo peptidases
Family M20
KQP88_05995 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
BNR_2
Motif
Other DBs
NCBI-ProteinID:
QWU84330
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Position
complement(1370728..1371879)
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AA seq
383 aa
AA seq
DB search
MTAPADLSPTLQLACDLIRRPSVTPVDADCQTVMMQRLGDAGFKLEPMRIEDVDNFWATH
GSSEGPVLCFAGHTDVVPTGPVKAWQTDPFDALIDEHGMLCGRGAADMKGSLAAMVVACE
RFVSDYPDHKGSVAFLITSDEEGPAHHGTKAVVERLAARKERLDWCIVGEPSSTTLVGDV
VKNGRRGSLGAKLTVRGIQGHVAYPHLAKNPIHLAAPALAELAAEHWDDGNAFFPPTSFQ
ISNLNSGTGATNVIPGDLVAVFNFRFSTESTVEGLQQRVAAILDKHDLDWHVDWALSGLP
FLTEPGALLDAVSDSIRKVTGRETKASTSGGTSDGRFIATLGTQVVELGPVNATIHQVNE
RILASDLDVLTEIYYQTMVKLLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacagccccagccgacctttcgcccacgcttcaacttgcctgcgacctgattcgccgt
ccttcggtcacgccggtcgatgccgattgccagaccgtgatgatgcagcgcctgggcgat
gccggtttcaaactggagccaatgcgcatcgaagatgtcgacaacttctgggcaacccac
ggcagcagcgaaggtccggtactgtgcttcgccggtcacaccgatgtggtgccgaccggc
ccggtcaaggcctggcagaccgacccgttcgatgccctgatcgatgagcacggcatgctc
tgcggtcgtggcgcagcggacatgaaaggcagtctggcggcgatggtggtggcgtgcgag
cgtttcgtcagcgattaccctgaccacaagggttcggtggctttcctgatcaccagcgac
gaagaaggtccggcacaccatggcaccaaggccgtggttgaacgtctggcggcgcgcaag
gagcgtctggactggtgcatcgtcggcgaaccgtcgagcaccacactggtaggcgatgtg
gtgaaaaacggacgtcgcggctccctgggcgccaaactcaccgtgcgtggcattcagggc
catgtggcctatccgcatctggcgaagaacccgattcatctggctgctccggcgctggcc
gaactggccgccgagcactgggacgatggcaatgcctttttcccgccgaccagcttccag
atatccaacctcaattcgggcactggcgcgaccaacgtgatccccggtgatctggtggcg
gtgttcaacttccgcttctcgaccgaatccaccgtcgaaggcctgcaacagcgtgtcgcc
gcgatcctcgacaagcacgatctggactggcacgtggactgggcgctatcgggcctgccg
ttcctgaccgaacccggcgccctgctggatgcggtttcagacagcatcaggaaagtcacc
ggccgtgaaaccaaggcgtccaccagtggcggcacgtcggatggccgtttcattgcaacc
ctgggcactcaagtggttgaactggggccggtcaacgcgaccatccaccaggtcaacgag
cgcatcctggccagcgatctcgatgtcctgaccgagatctactaccagaccatggtcaag
ttgctcgcctga
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