Plantactinospora sp. KBS50: CIK06_11140
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Entry
CIK06_11140 CDS
T05048
Name
(GenBank) lipopolysaccharide biosynthesis protein RfbH
KO
K13328
dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase [EC:
4.2.1.164
]
Organism
plk
Plantactinospora sp. KBS50
Pathway
plk00523
Polyketide sugar unit biosynthesis
plk01100
Metabolic pathways
plk01110
Biosynthesis of secondary metabolites
plk01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
plk00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CIK06_11140
Enzymes [BR:
plk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.164 dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase
CIK06_11140
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Motif
Pfam:
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
ASW57605
UniProt:
A0A248YVJ7
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Position
2508245..2509549
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AA seq
434 aa
AA seq
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MTDAQELILEQVRKYHREQQSDAGFVPGVTPLLPSGAVIDEDDRAALVEAALDLRIAAGV
SSRRFERKFARTLGLRKAHLTNSGSSANLLALTALTQRELGDRALRPGDEVVTVACGFPT
TVSPIIQNGLVPVFVDVELGTYNTTTERVAAAIGPRTRAIMIAHALGNPYRADEIAELAR
ERGLFFVEDNCDAVGSYLNGRLTGTFGHFSTTSFYPAHHLTMGEGGCVLTNDLKLARLVE
SLRDWGRDCWCEPGENDTCRKRFSQQQGMLPFGYDHKYTFSHVGYNLKNTDLQAALGLSQ
LGKLTEFGAARRRNWRRLRDELDGVPGLILPEPTPGSDPSWFGFVLTVRPDAGFTRAELV
AFLESRRIGTRVLFAGNLTRHPAFTDQRYRVVGELTNSDVITDNTFWIGVYPGLTSEMID
YMARSVREFVAGRG
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgacggatgcgcaggagctcatcctggagcaggtccgcaagtaccatcgcgagcagcag
tccgacgcgggtttcgtcccgggggtgacgccgctgctgccatccggcgcggtcatcgac
gaggatgaccgggcggcgctggtcgaagcggcactggacctgcggatcgcggccggtgtc
agttcccggcggttcgagcggaagttcgcccgcaccctggggttgcgcaaggcgcacctg
accaactccggctcctcggccaacctgctcgcgctgaccgcgctgacccagcgcgaactc
ggcgaccgggcactgcggcccggcgacgaggtggtgacggtcgcctgcggattccccacc
acggtcagcccgatcatccagaacggcctggtgccggtcttcgtggatgtcgagctgggc
acgtacaacaccacgaccgaacgggtggcggcggcgatcgggccgcggacccgggccatc
atgatcgcgcacgcgctcggcaacccgtaccgggccgacgagatcgccgagctggcccgc
gagcgtggactgttcttcgtggaggacaactgcgacgccgtggggtcgtacctgaacggc
cggctgaccggcaccttcgggcacttctccaccaccagcttctaccccgcccaccacctg
accatgggcgagggcggctgcgtgctgaccaacgacctgaagctggcccggctggtggag
tcgctgcgggactggggccgggactgctggtgcgagccgggcgagaacgacacctgccgg
aagcggttcagccagcagcagggcatgctgcccttcgggtacgaccacaagtacacgttc
tcgcacgtcgggtacaacctgaagaacaccgacctgcaggccgcgctgggcctgagccag
ttgggcaagctcaccgagttcggcgccgcccgccggcgcaactggcggcggctgcgcgac
gagctggacggcgtgccggggctgatcctgcccgagccgacgcccggttccgacccgagc
tggttcggcttcgtcctcaccgtgcggccggacgccggcttcacccgggccgagctggtc
gccttcctggagtcgcggcggatcggcacccgggtgctgttcgccggcaacctgacccgg
cacccggccttcaccgaccagcggtaccgggtggtcggcgagctgaccaacagcgacgtg
atcaccgacaacaccttctggatcggcgtctaccccggactgaccagcgagatgatcgac
tacatggcgcggtcggtccgcgagttcgtcgcgggtcgggggtga
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