Plantactinospora sp. KBS50: CIK06_24110
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Entry
CIK06_24110 CDS
T05048
Name
(GenBank) RNA polymerase subunit sigma-24
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
plk
Plantactinospora sp. KBS50
Brite
KEGG Orthology (KO) [BR:
plk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plk03021
]
CIK06_24110
Transcription machinery [BR:
plk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CIK06_24110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
ASW56581
UniProt:
A0A248YSE6
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Position
complement(5600662..5601525)
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AA seq
287 aa
AA seq
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MPTGTWSRERSDRVQRLLTGPEWSPVGPAAPAPARGAAQSPARGAAAERRAAAGTESAAG
GLRVSSAGQSTLRKPAGERGDVRLTRPEKTDERRARFERDALPFVDQLYAAGLRMTRNPA
DAEDLVQETYLKAFAAFHQFEEGTNLKAWLYRILTNTYINSYRKRQRQPVQAPTEEITDW
QLAEAESHTSSGLRSAETEALDRLPDSDVKTALQQLPEEFRLAVYLTDVEGFSYKEVAEI
MGTPIGTVMSRLHRGRRNLRKLLEQYAAERGFSAAPSTRAAAASREV
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaccgggacatggagcagggagcgcagtgaccgggtgcagcggctgctgaccggg
ccggagtggtcgccggtgggtccggcggcgcccgcgccggcacgcggcgcggcgcagtcg
ccggcacgcggcgcggcagccgaacgccgggcagccgccggaaccgaatctgccgctggt
ggtttacgcgtatcctcggcgggacagtcgactctgcggaagccggctggagagcgagga
gacgttcggttgacacgaccggagaagacggacgagcgtcgggcgcggttcgagcgcgac
gcgctgcccttcgtcgaccagctctacgccgccgggctgcggatgacccgtaaccccgcg
gacgcggaggacctggtccaggagacctacctgaaggcgttcgccgccttccaccagttc
gaagagggcaccaacctcaaggcgtggctgtaccggatcctcaccaacacgtacatcaac
tcctaccgcaagcggcagcggcagccggtgcaggctccgaccgaggagatcaccgactgg
cagttggccgaggcggagtcgcacacctccagcggcctgcggtcggccgagaccgaggcg
ctcgaccggctgccggacagcgacgtgaagacggcgctccagcagctgccggaggagttc
cggctggcggtctacctgaccgacgtcgagggcttctcctacaaggaggtggccgagatc
atgggcaccccgatcggtacggtgatgtcgcgactgcaccgggggcggcggaacctgcgc
aaactgctcgaacagtacgctgccgagcgagggttcagcgcggccccgtccacccgtgcc
gccgcggcgagccgggaggtgtga
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