Planctopirus limnophila: Plim_0009
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Entry
Plim_0009 CDS
T01225
Name
(GenBank) D-alanine/D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
plm
Planctopirus limnophila
Pathway
plm00470
D-Amino acid metabolism
plm00550
Peptidoglycan biosynthesis
plm01100
Metabolic pathways
plm01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Plim_0009
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Plim_0009
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Plim_0009
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
plm01011
]
Plim_0009
Enzymes [BR:
plm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Plim_0009
Peptidoglycan biosynthesis and degradation proteins [BR:
plm01011
]
Precursor biosynthesis
Amino acid ligase
Plim_0009
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_3
ATP-grasp
ATP-grasp_4
ATPgrasp_ST
TTL
ATPgrasp_YheCD
GARS_A
Motif
Other DBs
NCBI-ProteinID:
ADG65862
UniProt:
D5SME2
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All DBs
Position
complement(10824..11840)
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AA seq
338 aa
AA seq
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MSRGNIQSAATNPPRWNIALLAGGDSDERSISLRSGQAVCQALQERGHFILPIDPAIVSL
KGMDWNGFDAVFIALHGRFGEDGGVQTLLEESGIPYTGSSSQASRLAFDKRIAKQNFDRM
QVPTPAWCELSPHESFDSLLMKAKELGWPVVIKPASQGSSLGVSIVRQPEQLQSAYERAR
HYDEALIMEAAIVGSEWTVGLHDDEILPPICIETDREFFDWVAKYEDDHTRYIFDKPLPA
TCRQKLETACRGAVHALGVTGISRVDLMLDSEGNPWVLEINTIPGLTDHSLVPKAAQQAG
WSLGELCEESIHRAIQRRPRRPHLLRRASFSTQARQRP
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgcgggaacatacagtctgctgccaccaatccaccgcgatggaacattgccttg
ctggccggtggtgattctgacgagcggtcaatcagtctcagaagtggccaggccgtttgt
caggctttgcaggagcgtggccatttcatactgccgatcgaccccgccatcgtttcactc
aagggaatggattggaatgggtttgatgcagtctttatcgccctgcatggacggtttggc
gaagacggcggtgtgcagacattgctcgaagaatccggaattccttacacggggagcagc
agtcaggcttcccgtttagcgtttgataaacgcattgccaaacagaattttgatcgcatg
caggtgccgactcccgcatggtgcgaactttcacctcacgagtctttcgacagtttgctg
atgaaagcaaaggaactgggctggcctgtggtcattaaacccgcatcgcaaggctcgagc
ctgggcgtctcgattgtccgccagccagagcaacttcaatccgcttatgaaagggcacgc
cattacgacgaggccctcattatggaagcggcaattgtgggcagcgaatggactgtcgga
ctgcatgacgacgagatcttgccaccgatctgtatcgagacagaccgcgagtttttcgac
tgggtcgcgaaatacgaagacgaccacacacgttacatcttcgataaacctctcccggca
acatgccgacagaagctggaaactgcctgccggggagccgtccatgctctgggtgtgact
ggaatctcccgggtcgatctgatgctcgattcggaagggaacccctgggttcttgaaatc
aacaccattcccggattaaccgatcacagcctcgtccccaaggcggctcagcaagccggt
tggtctttgggagaattgtgcgaagagtcgattcaccgcgccatccaaagacgcccccgc
agaccgcacttactcagacgtgcttcgttttcgacacaggctcggcaaaggccttaa
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