Planctopirus limnophila: Plim_0622
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Entry
Plim_0622 CDS
T01225
Name
(GenBank) 2-oxoglutarate dehydrogenase, E1 subunit
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
plm
Planctopirus limnophila
Pathway
plm00020
Citrate cycle (TCA cycle)
plm00785
Lipoic acid metabolism
plm01100
Metabolic pathways
plm01110
Biosynthesis of secondary metabolites
plm01120
Microbial metabolism in diverse environments
plm01200
Carbon metabolism
plm01210
2-Oxocarboxylic acid metabolism
Module
plm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
plm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Plim_0622
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Plim_0622
Enzymes [BR:
plm01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
Plim_0622
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Prefoldin_2
Motif
Other DBs
NCBI-ProteinID:
ADG66469
UniProt:
D5SR01
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All DBs
Position
complement(804348..807134)
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AA seq
928 aa
AA seq
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MVRELENVASSSPSYVESLYQEYVKSPENVDVAWREYFRQIAEVARQAPHQEAQFFRPPT
MGDSNVVSPVELEAAILQERVDRLIRNYRAMGHYAAIIDPLGQPREPVPELDPASCDFSP
SDLDRQFSTVSSSGPNVRTLREILQWLRNTYCRSIGAQFMHIDNVKVREWLQDRMESSEN
RISLTADQQKRILKRLSDAVVFEDFILRKFQGAKSFSLEGGETLIPLLELAINKSASQGV
EEIILGMAHRGRLNVLASIMGKPARAIFREFADLDPQLHLGRGDVKYHLGYSNDYTTADG
KKVHLSLCFNPSHLEFVNTVALGRVRAKQDRRQDVERRKSMALLIHGDAAFAGEGITQEM
LNLSELESTRTGGTVHVIVNNQIGFTTPPHQGRSTAYATDVAKMLQIPIFHVNGEDPEAV
AQVVELAMDFRCEFQRDVVIDMYCYRLRGHNEQDEPRFTNPGMYKAIDRRQPMRVTYSNH
LTKLGGVTQQEADELVSQHKSQLESEYQVATASDYQHRWEQPNQLWKTYRGGNEDIAHDV
PTGVPVDRLKQLLEIQTHLPDGFKPHPKIQNILDQRRAISRGEKPVDWGAAEILAYASLL
TEKHPVRLHGQDCERGTFAHRHAVVHDIETGAKYVPLQHLTVEQARFQVYNSALSETGVL
GFDYGFSLDCPDGLTIWEAQFGDFVNVAQVIIDQFITSAEDKWNRYSGLTMLLPHGFEGA
GPEHSSARLERFLEACAEDNIQVCYPTTAAQMFHMLRRQVLRHWRKPLVVMTPKYYLRSP
QVAATLDDLANGSFQRIYPDVLTTRPDSAVQRILMCTGKIYHELAQRRQELGRSEVAIIR
VEQLYPLPTAELQQQLSRYAPQTPVTWVQEEPENMGAWRFILAQWGLNVLSQHQLRCVSR
PASASPATGSKKSHEIEQERVLSEAFGQ
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggttcgcgaactcgaaaacgtggccagttccagtccctcgtatgtcgaatcgctctat
caggagtacgtgaaatctcctgagaatgtggatgttgcctggcgtgaatatttccgccag
attgcggaggtcgcccgccaggctcctcatcaggaagctcagttcttccgtccacccacc
atgggcgattcgaatgtcgtctcgccggtggaacttgaagctgcgattttacaggagcgg
gtggatcgcctgatccgcaactaccgggctatgggtcactatgcggccattatcgatccg
ctgggccagccgcgcgagccagtcccggaactcgaccctgcttcctgcgatttcagcccc
agcgatcttgaccgccagttttcgacagtcagttccagcggccccaacgttcgtactctc
cgtgaaattctccagtggctgcgaaatacctattgccggtcgattggtgcacagttcatg
cacatcgataacgtcaaggttcgcgagtggctgcaggatcggatggaaagcagcgagaac
cgcatttctctgacagctgatcaacaaaaacgaatcctcaagcgattgagcgacgcggtc
gtctttgaagacttcattctccgaaagttccagggcgccaagagtttctctctggaaggg
ggcgaaacgctcattccgctgcttgaactggccattaacaaatccgcctcgcagggcgtc
gaagaaatcattctcggtatggcgcatcgtggccgcctgaatgtcctggccagcatcatg
ggcaaaccagcccgggcgatcttccgtgaatttgccgatctcgacccacaattgcatctg
ggccgaggcgacgtcaaatatcacctgggctacagcaacgattacaccactgcggatggc
aagaaagtccacctctcgctctgctttaaccccagccacctcgagtttgtcaataccgtg
gcactgggccgcgtccgggccaagcaggatcgtcggcaagatgtcgaacgccgcaaatcg
atggcactgctgattcatggtgatgcagcctttgccggtgaaggcatcactcaggaaatg
ctcaacctcagtgagctcgaatccacccgcacagggggcactgtgcatgtgattgtcaac
aaccagattggctttaccacaccgccgcatcaggggcgttcgacagcctatgccaccgat
gtcgcgaaaatgctgcagatcccgatcttccatgtaaatggtgaagatcccgaagcggtc
gctcaagtggttgaactcgccatggatttccgctgtgaattccagcgagatgtcgtcatc
gacatgtattgctatcgtttgcgcggtcacaacgaacaggatgaaccccgctttaccaac
ccgggcatgtataaagcgattgaccgtcgccagcccatgcgagtcacttattccaatcac
ctcacgaaactgggaggtgttactcagcaggaagcggacgaactcgtctcgcagcacaag
agtcagcttgaatccgagtatcaggtcgcgacagcctctgattaccagcatcgctgggaa
cagccaaaccagctttggaaaacctatcgtggtggcaatgaagacattgcccacgatgtc
ccgacaggtgttccagtcgatcggctcaagcagcttctggaaatccagacgcatctgccc
gatggtttcaaaccccatccgaaaattcagaacattctcgatcaaaggcgagccatttcc
cgcggcgaaaagcctgtggactggggtgctgccgaaatcctggcttacgcttcattgctg
acagaaaagcatcctgtgcgtttacatgggcaggattgcgaacgaggcacctttgctcac
cgccacgccgtggttcacgatatcgaaacgggcgccaaatacgttccactgcagcatctg
acggtcgaacaggctcgtttccaggtctataacagcgcactttcagaaacaggcgtgctg
ggctttgattatggcttcagcctcgactgccctgatgggttaacgatctgggaagcccag
tttggcgactttgtgaacgtggctcaggtgattatcgatcagttcatcaccagtgccgaa
gacaagtggaaccgttacagcggtctgaccatgctcttgccgcatgggtttgaaggggcc
ggccccgaacactccagtgctcgcctcgaacgattcctcgaagcctgtgccgaagacaac
attcaggtctgctacccgaccacggccgctcagatgttccacatgctgcgccggcaggtt
ttgcgacattggcgcaagccacttgtcgtgatgactcccaagtattacctccgctcgcct
caggtcgccgccacactcgacgatctggccaacggatcgttccagagaatctacccggat
gtcctcaccacgaggcctgattccgcagtccagcggattctcatgtgtacgggcaaaatc
tatcacgaactcgcccagcgtcgacaagaacttggccgctcggaagtcgccattattcgt
gtcgaacagctttatcctttgcccacagcggagcttcagcagcaactgagccgctatgca
ccacagacgccggtgacatgggtgcaggaagaaccagagaatatgggggcctggcgattc
attctggctcaatgggggctcaacgtcttgtcgcaacatcagttgcgctgtgtcagccgg
cccgcatccgccagccctgccacaggttccaagaagagtcatgaaattgagcaggaacga
gttctttcagaagcgtttggccaataa
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