Planctopirus limnophila: Plim_1405
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Entry
Plim_1405 CDS
T01225
Name
(GenBank) binding-protein-dependent transport systems inner membrane component
KO
K02034
peptide/nickel transport system permease protein
Organism
plm
Planctopirus limnophila
Pathway
plm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Plim_1405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plm02000
]
Plim_1405
Transporters [BR:
plm02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Plim_1405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
DUF883
Motif
Other DBs
NCBI-ProteinID:
ADG67239
UniProt:
D5SVG9
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All DBs
Position
1789194..1790822
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AA seq
542 aa
AA seq
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MASPLSTSSTSSTGVQASRSEQSQAAQIWREFKKRRLAVFAAILMIVEIMIAVFAPFIAN
DRPMAFRGVNRFEFQQLIQTVESLMAMANGESRQESGAAKKVYPVLEKAQSLLETASAEI
DVSKSGGSESRRQFEGLIRRIQDMQKPLGSFPDQTSALPPELIQGIQAILMDVKTLKKSE
LPPLLSRWYFPALAQLNGIDFWFIAAAIFWPLWWFATRLSTFAYRQPRWVQLLVLSGVPT
LAAGIWVEINPSRLDQTNYKQGVLTAYDFSRTAPVIFDVVVWPLVPFGIDEYDTTNQTKP
PAFSLKEPQKLATPWDRPHWLGTNHNGVDLLTLLIWGARISLSVGLVAVLIYMSIGIVLG
ALAGYFRGWVDILISRLIEVVICFPTLFLVLTIVALLKPSLINIMIVIGLTGWTGVARLV
RSEFLRLVNQEFVLAGKSIGFSSTRLIFRHILPNALAPVVVAATFGIAGAILLESSLSFL
GLGVRVPTPSWGTILSEGRTRLLQAPWQMTYPGFAIFITVTCYNLIGEALRDAADPRLRG
TR
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
gtggcctcacctctcagtacgagttcaacctcgtctacgggtgttcaagcctctcgcagt
gaacagtcgcaggcggctcagatctggcgcgagttcaagaaacgaagactcgcagtcttt
gcggccattctcatgattgtcgaaatcatgattgcggtctttgcaccgttcattgcgaat
gacaggccgatggcctttcgcggcgtgaatcgcttcgagttccagcagttgattcagact
gtggaatctctgatggcaatggccaacggtgaaagtcgccaggagagtggggcggcaaaa
aaggtctatccagttctggaaaaggcccagtcattgctggagacagcctccgcagaaatt
gatgtttccaagtccggcggaagcgaatcccgcaggcaatttgagggtttgatccgacga
attcaggatatgcagaaacccctcggctcgtttcccgaccagacctcggccttgccgcca
gaactgattcagggaattcaggcaattcttatggatgtcaaaacgctgaagaaaagcgaa
ttgcctccacttctctcccgctggtactttccggcactcgcacaactcaatggaatcgac
ttctggtttattgccgctgccattttctggccactttggtggtttgccacgcgactctcg
acgttcgcttatcgacaacctcgctgggtgcaactgctcgttctatctggcgttcccaca
ctggctgcaggcatttgggtcgaaatcaacccctctcgactcgatcagaccaattacaag
caaggtgtgctgacggcgtacgacttctctcgcaccgccccggtgatcttcgatgttgtc
gtctggccactggttccttttggcatcgatgagtacgacacgaccaatcagacaaagcca
cccgccttttcgctcaaggaaccgcaaaagctcgccacgccgtgggatcgcccgcactgg
ctggggacgaatcacaatggtgtcgatctcctgacacttctcatctggggagcacgcatc
agcctttcggtcggtctggtcgcggttctgatctacatgtcgatcgggattgtcctcggt
gctctggcgggctacttccgcggttgggtcgatattctgatctcacgtctgattgaagtc
gtcatctgcttcccgacactattcctcgtattgacgattgtggctcttctgaaacccagc
ctcatcaacatcatgattgtcatcggcttgaccggctggacaggtgtggcccggttagtt
cgcagcgagtttttgcggctggtgaatcaggaatttgtgctggctggcaagtcgattggc
ttttcctccacgcggctcattttccgacacatcctccccaatgccctggcccctgtggtc
gtggcggcgacatttggtattgccggagccatcctgcttgaaagctcactgtcatttcta
gggctgggtgtccgtgttcctacaccttcctggggcacaattctcagtgaaggccgcact
cgcctgctgcaggctccctggcagatgacgtatcccggattcgccattttcatcaccgtc
acctgctacaatctgattggcgaggcgctgcgggatgcggctgatccaaggctccgcggc
acacgataa
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