Planctopirus limnophila: Plim_2745
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Entry
Plim_2745 CDS
T01225
Name
(GenBank) ribonuclease PH
KO
K00989
ribonuclease PH [EC:
2.7.7.56
]
Organism
plm
Planctopirus limnophila
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plm03016
]
Plim_2745
Enzymes [BR:
plm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.56 tRNA nucleotidyltransferase
Plim_2745
Transfer RNA biogenesis [BR:
plm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Plim_2745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
F_bP_aldolase
Motif
Other DBs
NCBI-ProteinID:
ADG68568
UniProt:
D5SR75
LinkDB
All DBs
Position
3560404..3561123
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AA seq
239 aa
AA seq
DB search
MRHDGRQPDELRPIRIQRQFTKVAPGSVLISAGDTTLLVTASIDETLPPWKAADPAAQKG
WLTAEYCMLPGSTSPRKRREREKVDGRSTEIQRLIGRSLRACVDFETLGPRTIMIDVEVL
QADGGTRTLGITGGYIALCDAIATLGDKVSKDRPVLTTSIAAVSVGISHGTPILDLDYIE
DSQAEVDLNVVMTGSGEFIEIQGTAEGRSFTRAQLDQQLALAEKGIRQLMELQQAALKG
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgagacatgatggtcgccagccagatgaactgcgtccgattcgaattcagcgtcagttc
accaaagttgcccctggcagtgtgctgatctcggctggtgacacaactttgctcgtgacc
gccagcatcgatgaaaccctgcctccgtggaaggcagccgatcctgcagctcaaaaaggc
tggctcactgccgagtactgcatgctccccggcagtacctctccccgcaaacgccgcgaa
cgcgaaaaggtcgatggccgctcgacagaaattcaaaggctcattggccgcagcttacgg
gcctgtgtcgattttgaaacactggggccgcgcacgatcatgatcgacgtggaagttctg
caggctgatggtggcacccgcactctgggtattaccggcggctacattgccctgtgcgat
gcgattgcgaccttaggtgataaggtttcaaaagaccgccctgtgctgaccacgtcgatt
gctgcagtcagtgtcgggatttcgcacgggacaccaatcctggatctcgattatattgaa
gacagccaggcagaggttgatctcaatgtggttatgacaggttcgggcgaattcatcgag
attcaagggacagccgaaggccgctcgtttacccgcgcgcagctggatcaacagcttgca
ctggctgagaaaggcattcgccaactcatggaactccagcaagcagcattgaagggctga
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