Planctopirus limnophila: Plim_3135
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Entry
Plim_3135 CDS
T01225
Name
(GenBank) ATP dependent DNA ligase
Organism
plm
Planctopirus limnophila
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
ADG68950
UniProt:
D5SSZ9
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Position
complement(4055204..4056958)
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AA seq
584 aa
AA seq
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MRRFSQLFKELDATTRTSEKLAALERYFAQAEPVDAAWAVWFLSGHRPAQPVPVKRLRLW
AAELAELPEWLFAECYEAVGDLAETIALLLPPPQESEDRPFSWWITQVLLKLRNAGESEQ
KLMLKHAWRSLGTTERFVWNKLITGGFRVGVSQQLIVRAISQVTGIAVPILSHRLMGNWQ
PTAENYRALIEPEGQELNISQPYPFCLAYPLEDEIQTLGATSDWQVEWKWDGIRAQVIHR
QVMGFDGGEVFIWSRGEELITEAFPELIPEIEQLPLGTVLDGEILIIKEGQLQPFSQLQR
RIGRKTVGKKLQQDVPAGMMIFDLLEHKGQDLRNEPLVRRRELLEKLFEGLPLTRLQLAP
LIHESSWEEMANVRATSRERGVEGLMLKRKSSTYQAGRVRGDWWKWKIEPMTIDAVLVYA
QRGHGRRASLYSDYTFAVWEGNVLVPFAKAYSGLTDDEMREVDKFVREHAIEKFGPVCSV
KAELVFEIGFESLQESPRHKSGIAVRFPRMLRWRKDKTPLQADRMEEIRQMLRSMNLRAD
PQREDSSTLVARRKLKAPQSIRAESQLLLFGDDFDLMDDDPPEA
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgcttttctcaacttttcaaagaactggatgcgacgacacgcaccagcgagaag
ttagccgcactggagagatattttgcccaggcagagccagtcgatgccgcttgggccgtt
tggtttttgagtggccatcgcccggcgcagcctgttccggtgaagcgtctgaggctctgg
gcagccgaactggctgaacttcctgagtggttgttcgctgaatgctatgaagcggtgggt
gatctggccgagacgattgcgctgctgcttccgccacctcaggagagtgaggatcgaccc
ttttcatggtggattactcaagtacttctcaaactgcgcaatgccggcgaatctgaacag
aaattgatgctcaagcacgcctggagatcgctgggcacgactgaacggtttgtctggaac
aagctgataacgggcggttttcgtgtcggggtttcgcagcaactgattgtgcgggcgatc
tctcaagtgacagggatagcagtacccattttatctcatcgcctgatgggaaactggcag
ccgacagcagaaaactatcgcgccttgatcgagccggaagggcaggagctgaatatcagt
cagccctatccgttctgtctggcttaccctttggaggacgaaattcaaacgctgggtgcg
acctccgattggcaggttgagtggaagtgggatgggattcgagcgcaggtgatccatcga
caggtcatgggtttcgacggtggtgaggtcttcatctggtcgcgcggtgaggagttgatt
accgaggctttcccggagttgattcctgagattgagcagttgcctttgggaacggtgctg
gatggagagattctgatcatcaaggaaggacagcttcaaccattctcacaactgcagagg
cggattggcaggaagaccgtcgggaagaaactgcagcaggatgttcctgcgggaatgatg
attttcgacttgttagagcacaaagggcaagacctgagaaatgagcctttagtgcgccgc
agggagttactggagaaactgtttgaggggttgccgcttactcgattgcagttggcacca
ctcattcacgaatcgagctgggaagagatggcgaatgtgcgggctacgagccgggagcga
ggtgtcgaaggcttaatgctcaagcgaaagagttcgacttatcaggctggtcgagtgcgt
ggtgactggtggaagtggaagatcgaaccgatgacgattgatgccgtgctcgtctatgcc
cagcggggtcatgggcgaagggccagtctttacagcgattatacatttgctgtctgggaa
gggaatgtgctggtaccgttcgccaaggcgtattcgggtttgaccgatgatgaaatgcgg
gaagtggacaagtttgttcgcgaacatgccattgagaaatttggcccggtttgcagtgtg
aaggctgagctggtgtttgaaattggctttgaaagtcttcaggagtcgccccggcataaa
tccgggattgccgtgcgatttcctcgcatgctccgctggcgaaaagataagacaccactg
caggcagatcggatggaagagatccggcagatgttgagatcgatgaatctccgtgccgat
cctcagagagaagattcatcaactctggtggcccggcgaaaactcaaagccccccaatcg
atcagggccgagtctcaactgctgttgtttggtgatgatttcgacttgatggatgatgat
ccgccggaagcatga
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