Planctopirus limnophila: Plim_3447
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Entry
Plim_3447 CDS
T01225
Name
(GenBank) glycosyl hydrolase BNR repeat-containing protein
KO
K01186
sialidase-1 [EC:
3.2.1.18
]
Organism
plm
Planctopirus limnophila
Pathway
plm00511
Other glycan degradation
plm00600
Sphingolipid metabolism
plm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
Plim_3447
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Plim_3447
Enzymes [BR:
plm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
Plim_3447
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BNR_2
BNR_3
BNR
Sortilin-Vps10
Motif
Other DBs
NCBI-ProteinID:
ADG69260
UniProt:
D5SUX4
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Position
4457969..4459648
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AA seq
559 aa
AA seq
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MQCLLTRICLAVTLGCMTSMNMLGLMASEPEVTTSVVVYSGKAAELKWIGKPWASIEDPK
GSTSALLASGQNRWLLSRSGIGAGDFQIRVRLQLAKLDGTAAAFDFGSSRFGLDGKAGLL
FVEGPLFRNQPAATLKIADLVQPGAPFLLEVIRKDEQTRFLINGQSVYTLDGWKGSVGRV
GLRPWRNEMAVFDFSIKGNLYELPAPPEPLFPSGFAGGTEGYHTFRIPSLTTTRSGTLLA
LCEGRKNSTGDSGDIDLVMKRSTDGGKTWSQPVVLWDNGENTCGNPCLVVDQTTGELLLL
ATWNLGDDHESEIIAQTSRDTRRVYVLRSKDDGLTWSQPVEITKDVKQPDWTWYATGPGG
GIQIQQGSHAGRLVIPCDHIEARTKKYYSHVIYSDDHGQTWKLGGSTPAAGVNECEVVEL
TGGKLLLNMRNASASRQRQTSMSEDGGLTWSELKSDAALIEPVCQAAILRASWPARSEPG
WILFSNPASTTSRTNLTVRGSRDDGQTWPVSKVLYTGPAAYSDLALLPDGKVGCLFEAGE
ANYAESIVFVTFGLDELTT
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgcctgctgacgaggatctgcctggcggtcacactgggctgcatgacctcgatg
aacatgcttggtttgatggcctcagagccagaggtcacaacttcggtcgttgtctattcc
ggcaaggcggctgagttgaaatggattggtaagccttgggcatcgatcgaggatcccaag
ggctcaacgagcgcactgctggcgagtggtcagaatcgatggctgctctctcgaagcggg
attggcgcaggtgattttcagattcgagtgcggctgcagctggccaaactggatggaacg
gctgccgccttcgatttcggaagcagccgctttggtctcgatggcaaagcgggcctgctg
tttgttgaagggccactctttcgcaatcaaccagctgcgacgctcaaaatcgcagacttg
gtacagccgggtgctccgttcttgcttgaagtgattcgaaaggatgaacaaacccggttt
ctgatcaatggccagtcggtctacacactagatggctggaaaggctctgtcggtcgagtg
gggttgcggccgtggcgcaatgagatggcggtgtttgacttctcgatcaaaggaaatctt
tacgagttgccagcaccacctgagcctttgtttccaagtggctttgcaggtggaacggag
ggctatcacacctttcggatcccttctctgacaaccacgcgctcgggaacgttattggcc
ctttgcgaaggacgaaaaaactcgacgggcgatagcggcgatatcgacctcgtcatgaag
cgatcgaccgatggaggaaagacatggagccagcccgtcgtcctctgggataatggcgag
aatacttgcggcaatccgtgcctggtcgtcgatcaaacgaccggagaattattgctcctg
gcaacctggaacctgggtgatgatcacgagagcgagatcattgcccaaaccagccgcgat
acccggcgtgtgtacgttctgcgatccaaagacgacggcttgacctggagccagccggtg
gagatcaccaaagatgtgaaacaacccgactggacgtggtatgcgacagggccgggtggc
ggaattcaaattcagcagggctcccacgcgggtcgattggtcataccctgtgaccatatt
gaagccagaacgaaaaagtactactcgcacgtgatctactcggatgatcatgggcagacc
tggaaacttggcggaagcacgccagccgccggtgtgaatgaatgcgaggttgtcgaactg
actgggggaaaactgctgctcaatatgcgtaatgccagtgccagcaggcagaggcaaacg
agtatgagcgaggatggcggcctcacctggagtgaattgaaatctgacgcggcactcatc
gagcctgtctgccaggcagccatcctgcgagccagttggcctgccaggtcagagccgggc
tggatcctcttcagcaaccctgccagcaccactagccgcacaaatttgacagttcgcggc
agtcgggatgacggccagacctggcctgtcagcaaagttctgtatacgggcccagcggct
tattctgacctggctttacttcctgatggaaaagtcggctgcctgtttgaagcgggtgaa
gccaactacgccgagtcgatcgtctttgtgacattcgggctggatgaattaacaacgtga
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