Planctopirus limnophila: Plim_4118
Help
Entry
Plim_4118 CDS
T01225
Name
(GenBank) acetate/CoA ligase
KO
K01895
acetyl-CoA synthetase [EC:
6.2.1.1
]
Organism
plm
Planctopirus limnophila
Pathway
plm00010
Glycolysis / Gluconeogenesis
plm00620
Pyruvate metabolism
plm00630
Glyoxylate and dicarboxylate metabolism
plm00640
Propanoate metabolism
plm00680
Methane metabolism
plm01100
Metabolic pathways
plm01110
Biosynthesis of secondary metabolites
plm01120
Microbial metabolism in diverse environments
plm01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Plim_4118
00620 Pyruvate metabolism
Plim_4118
00630 Glyoxylate and dicarboxylate metabolism
Plim_4118
00640 Propanoate metabolism
Plim_4118
09102 Energy metabolism
00680 Methane metabolism
Plim_4118
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
plm01004
]
Plim_4118
Enzymes [BR:
plm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.1 acetate---CoA ligase
Plim_4118
Lipid biosynthesis proteins [BR:
plm01004
]
Acyl-CoA synthetase
Short/medium chain acyl-CoA synthetase
Plim_4118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
ACAS_N
Motif
Other DBs
NCBI-ProteinID:
ADG69929
UniProt:
D5SZ28
LinkDB
All DBs
Position
5283933..5285891
Genome browser
AA seq
652 aa
AA seq
DB search
MTNSGSIQSTLQETRKFLPASEFSAQAHISSEEQYQSMWQKAKDDPAGFWGELSQELQWI
KPWTEVISGEMPETRWFTGGQINACENCVDRHLTSWRRNKAAILWEGEPGDTRVLTYNDL
HREVSKFANVLKKLGVNTGDRVTLYMPMIPELAIAMLACARIGATHSIIFGGFSADAVAD
RNNDAQAKIIVTADGGWRRGKEVPLKSAVDESLTKSHTVQKVVVVRRTGQQVHMQTDRDY
WWHDLMSDVDPHCDVVPLDSEHPLFILYTSGSTGKPKGVMHTTAGYLLGTTMTSRWVFDL
KEEDTYWCTADIGWITGHSYVVYGPLSNGSTVVMYEGAPNWPDEGRFWEIIEKYRVSIFY
TAPTAIRAFIKWGDHWPQSRDLSSLRLLGSVGEPINPEAWMWYHRMIGQERCPIVDTWWQ
TETGAIMISPLPGISATKPGSCTRPLPGVVPEIVSKEGTPLEANEGGLLVMKQPWPSMLR
TLYGDHERFKQTYFSTIEGAYFAGDGARRDADGDIWVMGRVDDVLNVSGHRLSTMEVESS
LVAHPAVAEAAVVGFPHEIKGEGICCFVTLKTADSEGSDSLTADLIQHVRKQIGALATPD
KIRYTAALPKTRSGKIMRRLLRDIAAGRESVQDTTTLEDLSILAKLRDSDDA
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgacgaactctggcagtattcaaagtacgctccaggaaacgcgaaagtttctgcctgcg
agtgaattctcggcacaggcacacatttcgagtgaagagcaatatcagtcgatgtggcag
aaggccaaagacgacccagccggtttctggggagagctttcacaggaattgcagtggatc
aaaccgtggacggaagtcatttcgggagaaatgcccgaaacacgctggttcacgggaggg
cagatcaacgcctgcgaaaactgtgttgatcgacatctcaccagttggcggcgcaataag
gcagcgattctgtgggaaggcgaaccaggcgacacgcgcgtgctgacgtacaacgatctg
caccgggaagtgagcaagttcgcgaatgtgctcaaaaaactgggtgtcaatacgggtgat
cgagtcacgctctacatgcccatgattcccgaactggccattgcgatgctggcctgcgcc
agaattggcgcgactcactcgattatctttggtggcttcagtgccgatgcggtcgctgat
cgaaacaacgatgctcaagccaaaattatcgtgacggcagatggtggctggcggcgtggc
aaggaagttccactgaagtcggccgttgacgaaagtctgaccaagagccacaccgtgcag
aaggtggtggtcgtccggcggacgggtcagcaggttcatatgcagaccgaccgcgactac
tggtggcatgatctgatgagtgatgtggatccgcattgcgatgtggtaccactcgacagt
gagcatccgctatttattctgtatacctcaggcagtactggcaaacccaaaggtgtaatg
catacgacagcgggttatctgctgggtaccaccatgaccagccgctgggtctttgacctg
aaggaagaagacacttactggtgtactgccgatattggctggattacggggcatagctat
gtggtctacgggccgctctcgaatggctcgacagtcgtgatgtacgaaggagctccgaac
tggccggatgagggccgcttctgggaaattatcgagaagtaccgagtcagtatcttctac
accgcacccactgccattcgagcctttatcaagtggggcgatcattggccgcaaagccgg
gatctttcgagtttgagactgctgggttcggtgggtgagcccatcaatccggaagcctgg
atgtggtatcaccgcatgataggtcaggaacgctgcccgattgtcgatacctggtggcag
accgaaaccggagcgatcatgatcagcccgctgccaggtatctcggcaaccaaacccggt
agctgtactcgaccgctacctggtgtggtgccagagattgtcagtaaagagggaacgcca
ctggaagccaacgaaggtggtctgctggtgatgaagcaaccgtggcccagtatgctgcgc
acgctctatggggatcatgagcgattcaagcagacttacttcagcacgattgaaggagct
tactttgccggtgatggggcccgacgtgatgctgatggcgacatctgggtgatgggccga
gtggacgatgtgctcaatgtttcggggcatcgcttgagtaccatggaagtggaaagttca
ctggtggctcatccggcagtggctgaggcggctgtcgtgggcttcccgcatgaaattaaa
ggggaagggatctgctgttttgtgacgttgaagacagctgattccgagggttcagactca
ctcactgcagatctgattcagcatgtccgcaagcagattggtgctctcgcgacacctgac
aagatccgctacacggcagcacttccgaaaactcgcagtggcaagatcatgcgcaggctc
ctgcgagatattgcggctgggcgggagtcggttcaggacacgacgactctggaagatctc
tcgattctcgccaagttgcgtgatagcgatgacgcgtga
DBGET
integrated database retrieval system
