Perognathus longimembris pacificus (Pacific pocket mouse): 125340150
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Entry
125340150 CDS
T08928
Name
(RefSeq) protocadherin gamma-A4-like
KO
K16495
protocadherin gamma subfamily A
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plop04515
]
125340150
Cell adhesion molecules [BR:
plop04515
]
Cadherins
Protocadherins
125340150
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
RET_CLD1
HTH_Tnp_1
TMEM154
Motif
Other DBs
NCBI-GeneID:
125340150
NCBI-ProteinID:
XP_048187560
LinkDB
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Position
22:complement(7039719..7042201)
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AA seq
823 aa
AA seq
DB search
MAAASPSDCRRLVWMCFVLGALWEVRAQQIRYTVREELEEGSAVGDLARDLGLEPRELAE
RGVRIMSRGKAQLFALSPRGGGLVTAGRIDREQLCHTSAQCVAHLEILLEDKVSIVGIEV
EITDVNDNAPSFATEQWEIQVAEYEVPGTRFPLPEAFDPDIGLNSLQGYQLSSNAHVSLD
VQRGPDGVQYPELVLERALDREEEPVHHLVLTAYDGGDPVRSGTARIHITLLDINDNAPA
FTQPEYHVSVRENLPVGTQLLTIKATDPDEGTNGEVTYSFRKARDKISQLFQLDSVSGVI
TILGDLDFEENGFYDIDVEARDGPGLRARSKVLVTVVDVNDNAPEVTVTSLTSSIQEPSS
PGEVIALFNVHDSDSGENGLVTCSIPDHLPFRLEKTYGNYYRLLTHRTLDREEVSEYDIL
LTATDQGTPPLSTEMHIALQVTDINDNPPTFTQASYSAYIPENNPRGASILGMTAQDPDS
GENAQVTYSLTEDTIQGMPLSSFISINSNTGVLYALRSFDYEQFQDLRLLVIASDGGQPP
LSSNVSLSLFVLDQNDNAPEILYPTLPTDGSTGVELTPRSAEPGYLVTKVVAVDRDSGQN
AWLSYRLLKASEPGLFTVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT
IAVADSIPEVLADLSSVHTAPDTGDSDLTLYLVVAVAVVSCVFLAFVIVLLALRLRRWHT
RRPPPTAHSGLAGLPASHLVGVDGVHAFLQTYSHEVSLTADSGKSHLIFPQPNYADTLLS
QESCAKSEPLLLPQDFPVSEGDPSHPPVSQFYHLSHSGEHRIL
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcttctccatcagactgcaggcgactggtgtggatgtgctttgtgctggga
gccctgtgggaagtgcgggcccagcagatccgctacacggtgcgggaggagctggaagaa
ggctctgccgtgggcgacctggcccgggacctggggctggagccgcgggagctggcggag
cgcggcgtgcgcatcatgtccagagggaaggcgcagctcttcgcgctgagcccgcggggc
ggcggcctggtcaccgcgggcaggatcgaccgcgagcagctctgccacacatctgcccag
tgtgtggcacacttggagatcctcctagaggacaaggtgagcattgtgggaatcgaggtg
gaaataaccgatgtgaatgacaatgcgcccagctttgcaacagagcagtgggaaatacaa
gttgctgaatatgaagttcctgggacgagatttccgctccctgaagctttcgatccggac
atagggctgaattctctgcagggttaccagctcagctccaatgctcacgtctccctggac
gtgcagagaggacctgatggggtccagtacccagagctggtgctagaacgcgccctagac
cgtgaggaagagccagttcaccacctggttctcactgcctacgatggaggcgaccccgtt
cgctcgggcactgccaggatccacattacactactggacatcaatgataacgctcccgcg
ttcacccagccagagtaccacgtcagtgtgcgggagaatttgcccgtgggcacccagctt
ctcaccatcaaagccaccgatcctgatgaggggaccaatggagaagtgacatattccttc
cggaaagccagagacaagatatcccagttgttccagttggattctgtcagtggggtcatc
acaatattaggagatctggattttgaggagaatggattttatgatatcgatgtagaagcc
cgtgatggtcctggccttcgggcccgaagtaaggtgctggtgacagttgtggatgtaaac
gacaatgctccagaagtcacagttacctcgctcaccagctccatccaagagccttcttcc
ccaggagaagtcattgctcttttcaacgttcatgacagtgactccggagagaatggcctc
gtcacatgttcgattccagatcatcttccatttagactggaaaagacctatggaaattat
taccggttattgacacacagaactctggacagagaggaagtctcagaatatgacatcctg
ctaactgccactgaccagggaacacctcccctgtctacagagatgcatattgcattgcag
gtgacagacatcaatgacaacccacccaccttcactcaagcctcctactctgcctacatt
ccagaaaataacccgagaggagcatcgatcttgggaatgacagcccaagaccctgacagc
ggggagaacgctcaagtaacctattctctcacagaggacaccatccagggaatgcctctg
tcctccttcatctccatcaactccaacacgggagtcctgtatgctcttcgttcctttgat
tacgagcagttccaagacttgcggctgcttgtgatcgccagcgacggtggacagccaccc
ctcagcagcaacgtgtccctgagtctgttcgtgctggaccagaatgataacgcacctgag
atcctctaccccaccctccccacggatggttccacgggcgtggagctgacacctcgctcc
gcagagccgggatacctggtgaccaaggtggtggccgtggacagggactcagggcagaac
gcctggctgtcctaccgcctgctcaaggccagcgagccggggctcttcacggtggggctg
cacacgggtgaggtgcgcacggcgcgggccctgctggacagagacgcgctcaagcagagc
ctcgtggtggcggtgcaggaccacggccagccgcccctctcggccaccgtcacgctcacc
atcgccgtggctgacagcatcccggaggtcctggcagatttgagcagcgtccacactgcc
cctgacacaggggactccgacctcacgctgtacttagtggtggcggtggccgtggtctcc
tgtgtctttctggcttttgtcatcgtgctgctggccctgaggctgagacgctggcacaca
cgccgtccacctccgacagcacacagtgggctggcaggtctacctgcttcacacttggtg
ggtgtggatggggtgcacgctttcctgcagacctattcccatgaggtgtcgctcaccgcg
gactcggggaagagccacctgatcttcccgcagcccaactatgcggacacgctcctcagc
caggagagctgtgccaaaagcgagcctctcctgctaccccaggatttccctgtgtcagaa
ggagaccccagccaccctccggtaagccagttctaccatctgtctcactctggggagcat
aggatcctgtga
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