Perognathus longimembris pacificus (Pacific pocket mouse): 125342822
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Entry
125342822 CDS
T08928
Symbol
Phc1
Name
(RefSeq) LOW QUALITY PROTEIN: polyhomeotic-like protein 1
KO
K11456
polyhomeotic-like protein 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125342822 (Phc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125342822 (Phc1)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
125342822 (Phc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHC2_SAM_assoc
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
125342822
NCBI-ProteinID:
XP_048191086
LinkDB
All DBs
Position
27:complement(7278366..7286585)
Genome browser
AA seq
932 aa
AA seq
DB search
METESEQNPNSAGAGSGGSARPQIAQMSLYERQAVQALQALQRQPNAAQYFHQFMLQQQL
SNAQLHSLAAVQQATIAASRQASSPNPSAVPPPQPASTTQASMNAAPTPAAAAQLASRSQ
SASSPGATTLTQSVLLGNAASPPLSQSQAQMYLRVNRTLGRNVPLASQLILMPNGAVAAV
QPEGPPAPPGAPSPGGHPDAARRRRPGPCRTWRCAGPRPPRRPRPRPRARRCRARAPSRG
SRRRPGLGPRAGRPGAALPVGEPEPGGRGRGRGRGRGGLPGPLGLGAGGPAPGGGGGGGG
LGPLPASPALAGGGCPRKGTGVVQPLPVAAQAAALGPGGGGGGGAEAEAAKKAEGDAAGA
GGGAAPSAGVNLTRTAAPAPSQTLISSATYTQIQPHSLIQRQQQIHLQQKQVVIQQQIAI
HHQPQFPHRQSQLLHAAAAAAHLQLQPPPAAPPAAPAPPPPAAHPPAPPGPPPPPPPAPT
QTLVVQPMLQAAPLPIQAKPAAAAAAPAPPPKPPAPGAAPHIPVQVVGARQPGPAHAQAL
GLAQLAAAVPAARGPAPPAGPALAAASPPSAQAPGRSRRLAVKRKAESEEERGALPARGA
EDKGGLGEKAEAASGGAPSLAGGELEAAVLAPAPPAPAPSLALVSRPAGDSRPPQAIVKP
QILTHIIEGFVIQEGAEPFPVACAQLLKESEKALPSGLPPGLGQSPSGGALGGDSPSVEL
EKPASLLKCEYCGKYAPAEQFRGSKRFCSMTCAKRYNVSCSHQFRLKRKKMKEFQEASYA
RVRRRGPRRSSADMARAKAQGKRHRGQEDSSRGSDNSSYDEALSPTSPGPLGRAGHAERE
LGGALAAPPTPELHGASPEFLPAHPSRWSVEEVYEFIASLQGCQDIAEEFRSQEIDGQAL
LLLKEEHLMSAMNLKLGPALKICAKINVLKEA
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggagactgagagcgagcagaaccccaactcggcgggcgcgggctctgggggcagcgcc
cggccgcagatcgcccagatgtccctgtacgagcggcaggcggtgcaggccctgcaggcc
ctgcagcggcagcccaacgccgcgcagtacttccaccagttcatgctccagcagcagctg
agcaacgcccagctgcacagcctggcggccgtccagcaggccacgatcgccgccagccgc
caggccagctccccgaaccccagcgccgtgccgccgccgcagccggcctccaccacgcag
gcctcgatgaacgcggcccccacgcccgccgccgccgcgcagctggccagccggtcgcag
agcgcgagctcgccgggcgccaccacgctgacgcagtcggtgctgctggggaacgcggcc
tccccgccgctcagccagtcccaggcccagatgtacctgcgggtgaaccggaccctgggc
cgcaacgtgccgctcgcctcgcagctcatcctgatgcccaacggggcggtggccgccgtg
cagccggaggggccgcccgcgccgcccggggccccgtcccccggcggccaccccgacgcc
gcccgccgccgccgaccaggtccgtgcagaacctggcggtgcgcggggccccgcccgccc
cgtcggccccgaccccggccccgggcgcgcagatgccgggctcgggcgccaagccgcggg
tcccggcgccgccccggcctcgggccccgcgctggccgccccggggccgccctgcccgtc
ggtgaacctgagcccggcgggcgcgggcgcgggcgggggcgggggcggggcggcctgccg
gggcccctgggactgggggcgggcggcccggcgcccgggggcggcggcgggggcggcggc
ctgggccccctgccggcctcgcccgcgctggccgggggcggctgcccgcggaagggcacg
ggcgtggtgcagcccctgccggtggccgcgcaggcggcggcgctgggccccgggggcggc
ggcggcggcggggccgaggcggaggccgccaagaaggccgagggcgacgcggccggggcc
ggcgggggcgcggcgcccagcgcgggcgtcaacctgacgcgcacagccgcgcccgcgccc
agccagacgctcatcagctcggccacgtacacgcagatccagccgcactcgctgatccag
cggcagcagcagatccacctgcagcagaagcaggtggtgatccagcagcagatcgccatc
caccaccagccgcagttcccgcaccgccagtcgcagctgctgcacgccgccgccgccgcc
gcgcacctgcagctccagccgccgcccgccgcgccccccgccgccccggccccgccgccg
cccgccgcgcacccgcccgcgccgcccggcccgccgccgccgccgccccccgcgcccacg
cagacgctggtggtgcagcccatgctgcaggcggcgccgctgcccatccaggccaagccc
gccgccgccgctgccgccccggccccgccgcccaagccgcccgcgcccggcgccgccccg
cacatccccgtgcaggtggtgggcgcgcgccagccgggccccgcgcacgcgcaggcgctc
ggcctggcgcagctggcggccgccgtgcccgccgcccgcggccccgcgccgcccgccggg
cccgcgctcgccgccgcctcgccgccctccgcgcaggcgccggggcgaagccgccggctg
gcggtgaagcgcaaggccgagagcgaggaggagcggggcgccctgcccgcccgcggggcc
gaggacaagggcggcctcggagagaaggcggaggccgcgtccggcggggcccccagcctg
gcgggaggcgagctggaggccgccgtcctggccccggctccccccgcgccggcgccctcg
ctggccctggtgtcgcggccggcgggggactcgcggccgccgcaggccatcgtcaagccg
cagatcctcacgcacatcatcgagggcttcgtcatccaggagggggcggagccgttcccg
gtggcgtgcgcgcagctgctgaaggagtctgagaaggcgctgccgagcggcctcccgccg
ggcctgggccagagcccgtcggggggcgcgctgggcggggacagcccctccgtggagctg
gagaagcccgcgagcctcctcaagtgcgagtactgcggcaagtacgcgcccgccgagcag
ttccgcggctccaagcgcttctgctccatgacctgcgccaagaggtacaacgtgagctgc
agccaccagttccggctgaagaggaagaagatgaaggagttccaggaagccagctacgcg
cgcgtgcgccggcgcgggcctcgccgcagctccgccgacatggcccgcgccaaggcccag
ggcaagcgccaccggggccaggaggactcgagccggggctcggacaactcgagctacgac
gaggcgctgtccccgacgtccccggggcccctggggcgcgcgggccacgcggagcgggag
ctgggcggcgccctggccgcgccccccacgcccgagctgcacggcgccagccccgagttc
ctgccggcgcaccccagccgctggagcgtggaggaggtgtacgagttcatcgcctcgctg
caaggctgccaggacatcgcggaggagttccgctcgcaggagatcgacgggcaggcgctg
ctgctgctcaaggaggagcacctcatgagcgccatgaacctcaagctggggcccgcgctc
aagatctgcgccaagatcaacgtgctcaaggaggcctga
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