Perognathus longimembris pacificus (Pacific pocket mouse): 125359631
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Entry
125359631 CDS
T08928
Symbol
Lamb3
Name
(RefSeq) laminin subunit beta-3 isoform X1
KO
K06244
laminin, beta 3
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04151
PI3K-Akt signaling pathway
plop04510
Focal adhesion
plop04512
ECM-receptor interaction
plop05145
Toxoplasmosis
plop05146
Amoebiasis
plop05165
Human papillomavirus infection
plop05200
Pathways in cancer
plop05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
125359631 (Lamb3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125359631 (Lamb3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125359631 (Lamb3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125359631 (Lamb3)
09162 Cancer: specific types
05222 Small cell lung cancer
125359631 (Lamb3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
125359631 (Lamb3)
09174 Infectious disease: parasitic
05146 Amoebiasis
125359631 (Lamb3)
05145 Toxoplasmosis
125359631 (Lamb3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
Laminin_EGF
BNR_6
Laminin_II
DosC_2nd
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
125359631
NCBI-ProteinID:
XP_048213394
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Position
11:54660883..54704351
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AA seq
1172 aa
AA seq
DB search
MRRLLLLYFALPGLLCDQQACSRGACYPPVGDLLIGRTQFLRASSTCGLTKPETYCTRHG
EWHMKCCKCDSRLPHNYNSHRVENVVSSSGPVRWWQSQNDVSPVSLQLDLDRRFQLQDIM
MDFKGPMPAGMLIERSSDFGKTWKVYQYLASDCATAFPRIRQGQPQNWQDARCQPMPHRP
NGHQNGGKVQLNIMDLASGISASQGQKIQELGDITNLRVNFTKLAPVPRRGVHPPSAYFA
VSQLRLQGSCLCHGHADRCVPKPGAPAGPSTAVKVHDVCICQHNTAGPNCERCAPFYNNR
PWRPAEGHDPHECQRCDCNGHSETCHFDPAVFAASQGTHGGVCDNCRDHTEGRNCERCQL
HYFRNRRPGAPIQETCIPCECDPDGAVPGAPCDPKTGQCVCKEHVQGERCDLCKPGFTGL
TYANPQGCHRCDCSVLGARRDMPCDEESGRCLCLPNVVGPKCDQCAPSHWKLASGRGCEP
CACDPHNSLSPQCNQFTGQCPCREGFGGLTCSAAAIRQCPDRTHGDVTTGCRACDCDFRG
TEGPGCDKASGRCLCRPGLTGLRCDQCQRGYCDRYPVCVACHPCFQSYDADLREKAHRLG
SLRNATARLWSGAGLEDPGLASRMLAAKNKIQQIQAILSSASVTEEEVAQVANGIFSIRR
ALQGLQLDLPLEEEMATLPGDLESLDRSFNHLLIMYQSKREQFEKISGSDPSGAFRMLTA
AYERSAQAAQRVSDSSHLLRQLRDSRREAEDLERQMGAGGGAGGPQLEALRLEMASLPDL
TPTINKLCGGSRQMPCTPGACPGELCSQDNGTTCGPHCRGALPRAGGAFRTAGQVAEQLR
AFNLQLQQTRQMIKAAEEAASQVQSDAQRLETQVSTSRSQMEEDTGRIRQLIQHVRDFLS
DPETDAATIQEVSQAVLALWLPTDSATVLRKMNEIQAIAARLPNVDLVLSQTKQDIARAR
RLQAEAEQARSRAHTVEGQVEEVVGNLRQGTVALQEAQDTMQGTGRSLRLIQERVAEVQQ
VLVPAERLVMSMTEQLGRFRTRMEELRRQAQQQRAQAAQAQQLAEGTNKWALTAQEGFER
VQQKYAELKDRLGQSPMLGEQGSRIQSVKREAEELFEETMEMMDRMKDMESELLQGSQAI
VLHSAHLTGLEKRVEQIRDHINGRVLYYATCK
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgagacggctccttcttctgtatttcgcattgcccggcctcctgtgtgaccaacaagct
tgctcccgcggggcttgctatccacctgttggggacttgctcattgggaggacccagttt
ctccgagcttcatccacctgtggactgaccaagcctgagacttactgcacgcggcacgga
gagtggcatatgaaatgctgcaagtgtgactccaggctgcctcacaattacaacagccac
cgagtggagaatgtggtttcgtcttcaggccccgtgcgctggtggcagtcacaaaatgat
gtgagccctgtttctctgcaactggacctggacaggagatttcagcttcaggacatcatg
atggattttaagggtcccatgcctgcaggcatgctgattgagcgctcttcagactttggc
aagacctggaaggtgtaccagtacctggcttctgactgtgcgactgccttcccccggatc
cgtcagggccagccacagaactggcaggatgcccggtgccagcctatgccccataggccg
aatgggcatcaaaatggggggaaggtccagcttaacattatggatttagcatctgggatt
tcagcatctcaaggtcaaaaaatccaagagttgggagacatcacaaacctaagagtcaac
ttcaccaagctggcccctgtgccccggaggggtgtccaccctcccagcgcctacttcgct
gtgtcccagctacgtttgcaaggcagctgcctctgtcatggccatgctgaccgctgcgtc
cccaagcctggcgcccccgcgggcccctccaccgctgtgaaggtccacgatgtctgcatc
tgccaacacaacactgctggccccaactgtgagcgctgtgcgcccttctacaacaaccgg
ccctggagacctgcagagggccacgacccccatgaatgccaaaggtgtgattgcaatggg
cactcggagacctgtcacttcgacccagctgtgtttgctgccagccaggggacacatgga
ggtgtgtgtgacaactgccgggaccacacggagggcaggaactgtgaacggtgtcagctg
cactattttcggaaccggcgacctggcgctcccatccaggagacctgtatcccttgtgaa
tgtgacccggatggggcagtgccaggggctccctgtgaccccaagactggccaatgcgtg
tgcaaggagcatgtgcagggagaacgctgtgacctgtgcaagccgggcttcactggactt
acctacgccaacccacaggggtgccaccgctgtgactgcagcgtcctaggggcccggcga
gacatgccctgtgacgaggagagtgggcgctgcctgtgtctgcccaatgtggtgggcccc
aagtgtgaccagtgcgctccctcccactggaagctggccagtggccggggctgcgagccg
tgtgcctgtgacccgcacaactccctcagcccccagtgcaaccagttcacagggcagtgt
ccctgccgggaagggtttggtgggctgacgtgcagtgctgcagccatccgccagtgtcct
gacaggacccacggagatgtgactaccggatgccgagcctgtgactgtgacttccgggga
acagagggtccaggctgtgacaaggcctcaggccgctgcctctgccgtcctggcttgacg
gggctccgctgtgaccagtgccagcgaggctactgcgaccgctacccagtgtgtgtggcc
tgccacccctgcttccagtcctatgatgctgacctccgggaaaaggctcaccgtcttggc
agccttcgcaatgccacggccagactgtggtcaggggcaggcctggaggaccccggcctg
gcctcccgcatgctggctgccaagaacaagatccaacagatccaagctatcctcagcagc
gcctcagtcacagaggaggaggtggcccaggtggccaatggcatcttttccatcaggcgg
gctcttcagggcctgcagctggacctgcccctagaagaagagatggcaaccctcccagga
gatctggagagtctggacagaagcttcaatcatcttctcattatgtatcagagcaagagg
gagcagtttgagaaaataagcggttctgacccttcaggagccttccggatgctaacagca
gcctatgagcggtccgcccaggccgctcagcgggtatctgacagctcccacttgctgcgc
cagctcagggacagccgtagagaggcagaagatctggagaggcagatgggagctggagga
ggtgctggtggtccccagcttgaggccctccggctagagatggcttccttgcctgacctg
acacccaccattaacaagctctgtggtggctccaggcagatgccctgcaccccaggagca
tgccctggggagctgtgttcccaagataacggcacaacctgtggcccccactgcagaggt
gccctccccagggccggaggggccttccggacggcggggcaggtggctgaacagctacgg
gcctttaacctccagctccagcagacaaggcagatgattaaggcagcggaagaagctgcc
tcgcaggtccaatcagatgcccagcgtctggagacccaggtgagcaccagccgctctcag
atggaggaggacacggggcgcattcggcagctcatccagcacgtgcgggacttcctctcg
gaccctgaaacagacgcagccaccatccaggaggtgagccaggcggtgctggctctgtgg
ctgcccaccgactccgctactgtcctgcggaagatgaatgagatccaggccatcgcagcc
aggctccccaatgtggacctggtgctgtcccagaccaaacaggacatcgcccgggcccgc
aggctccaggctgaggctgagcaggccaggagccgagcccacacagtggaaggccaggta
gaggaggtggttgggaacctgaggcaaggcacagtggcactgcaggaggctcaagacacc
atgcaaggcaccggccgctccctgcggcttatccaggagagggtggctgaggttcaacag
gtcctggtgcctgcagagaggctggtgatgagcatgacagagcagctgggccgcttccgc
actcggatggaggagctccgtcgccaggcccagcagcagcgggcccaggcggcccaggcc
caacagcttgcggagggcaccaacaagtgggcactgactgcccaggagggatttgagaga
gtacagcaaaagtatgctgagctgaaggaccggctgggtcagagtcctatgctgggtgag
cagggcagccgaatccagagcgtcaagagagaggccgaggagctgtttgaagagaccatg
gagatgatggacaggatgaaagacatggagtcagagctgctgcaagggagccaggctatt
gtgctgcactcggcgcacctgacggggctggagaaacgtgtggagcagatccgtgaccat
atcaacgggcgcgtcctctactatgccacctgcaagtga
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