KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125361365
Entry
125361365         CDS       T08928                                 
Symbol
Taf10
Name
(RefSeq) transcription initiation factor TFIID subunit 10
  KO
K03134  transcription initiation factor TFIID subunit 10
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:plop00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    125361365 (Taf10)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:plop03021]
    125361365 (Taf10)
   03036 Chromosome and associated proteins [BR:plop03036]
    125361365 (Taf10)
Transcription machinery [BR:plop03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     125361365 (Taf10)
   Coactivators
    SAGA/TFTC/STAGA complex
     125361365 (Taf10)
Chromosome and associated proteins [BR:plop03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     125361365 (Taf10)
    STAGA complex
     125361365 (Taf10)
    TFTC complex
     125361365 (Taf10)
    SAGA complex
     125361365 (Taf10)
    SLIK complex
     125361365 (Taf10)
SSDB
Motif
Pfam: TFIID_30kDa Bromo_TP
Other DBs
NCBI-GeneID: 125361365
NCBI-ProteinID: XP_048215750
LinkDB
Position
13:complement(14693730..14695154)
AA seq 215 aa
MSGCSGSGADPEAAPATAASAPAPAVSAPAAMPAGTAAENKASPAGTAGGPGAATTGTGP
VAARAGEPAERRGAAPVSAGGAAPPEGAMSNGVYVLPSAANGEVKPVVSSTPLVDFLMQL
EDYTPTIPDAVTGYYLNRAGFEASDPRIIRLISLAAQKFISDIANDALQHCKMKGTASGS
SRSKSKDRKYTLTMEDLTPALSEYGINVKKPHYFT
NT seq 648 nt   +upstreamnt  +downstreamnt
atgagcggctgcagcggctctggcgcggaccccgaggcggcaccggccaccgccgcctcg
gccccggcgcccgcagtctcggctcccgctgcaatgcccgccggcaccgccgcggagaac
aaggccagccccgcggggacagcggggggacctggggccgcgactacgggcacgggaccc
gtggcggcgcgagctggggagccggcggagcggcgcggggcggctccggtgtcggcgggc
ggcgcggccccgccggagggggcgatgtccaacggggtttacgtcctcccgagcgccgcc
aacggagaggtgaagcccgtggtgtccagcacgcctttggtggacttcttgatgcagctg
gaggattacacacccacgattccagacgcagtcaccggttactacctgaaccgtgctggc
tttgaagcctcagacccacgaataattcggctcatctccttagctgcccagaaattcatc
tcagatattgccaacgatgccctacaacactgcaaaatgaagggcacagcctctggcagc
tccagaagcaagagcaaggaccgcaagtacactctaaccatggaggacttgacccctgcc
ctcagcgagtatggcatcaatgtgaagaagccgcattatttcacctga

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