Perognathus longimembris pacificus (Pacific pocket mouse): 125362294
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Entry
125362294 CDS
T08928
Symbol
Gli1
Name
(RefSeq) zinc finger protein GLI1 isoform X1
KO
K16797
zinc finger protein GLI1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04024
cAMP signaling pathway
plop04340
Hedgehog signaling pathway
plop05200
Pathways in cancer
plop05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
125362294 (Gli1)
04024 cAMP signaling pathway
125362294 (Gli1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125362294 (Gli1)
09162 Cancer: specific types
05217 Basal cell carcinoma
125362294 (Gli1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125362294 (Gli1)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
125362294 (Gli1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
IL17
Motif
Other DBs
NCBI-GeneID:
125362294
NCBI-ProteinID:
XP_048217037
LinkDB
All DBs
Position
1:complement(44415938..44431930)
Genome browser
AA seq
1106 aa
AA seq
DB search
MFNSMTPPPISSYGEPCCLRPLPSQGVPSMGTEGLSGLPFCHQTNLMPGPHSYGPARETN
NCNEGPLFPPPRSSVKLTKKRALSISPLSDASLDLQTVIRTSPSSLVAFINSRCTSPGGS
YGHLSIGTMSPSLGFPPQVNHQKGTSPSFGVQPCVPHDSTRSGMMPHPQSRGPLPTCQLK
SELDMLVNKCPEEPLEGDMSSPNSTGTQDHLLGLLDGREDLEREEKPEPESVYETDCRWD
GCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKP
HKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEK
PYVCKLPGCTKRYTDPSSLRKHVKTVHGPDAHVTKRHRGDGPLPRAPTLSTAEPKREREG
GPIGGENRLTVPEGAMKPQPSPGAQSSCSSDHSPAGSAANTDSGVEMTGNAGGSTEDLSS
LDEGPCIAGTGLSTLRRLENLRLDQLHQLRPLGPRGLKLPSLTHTGTPVSRRLGPPVSLD
HRSSSSSSMSSAYTVSRRSSLASPFPPGSPPENGTSSLPGLTPAQHYLLRARYSSARGGG
TPPTAAPSLDRMGGLPVPPWKSRAEYPGYNPNAGVTRRASDPARAADRPAPVRVQRFKSL
GCVHTPPIGTTGGRNFDPHLSTSVYSPQPPSINENVAMDTRGLREEPEVGTSMMGNGLNP
YMDYSSADTLGYGGTEGAAAEPYGARGPGSLPLGPGPPTNYGPSPCPQQVSYPDPTTDTW
GELPSHSGLYPGTKAPSGAYSHCPRLEHYGQVQVKPEQGCPVGSDSTGLAACLNAHPSEG
PPCPQPPFSHYPQPPPPQYPQSGPYPQPPPDYLPSEPRSSLDFDSPSHSTGQLKAQLVCN
YVQSQQELLWEGGGRGEAPIQEPPYQSHKFLGGSQVSPSTTKAPVATYGPGFAPSLPNHK
SGSYPTSSPCHDNFAVGTNRVSHHRAVAPPRLLPPLPTCYGPLKAGGTNPSCGHPEVGRL
GGGPALYPPPEGQVCNPLDSLDLDNTQLDFVAILDEAQGLSPPSHDQEDSSEHTPPPSGP
PNMAVGNMSVLLGSLPGETQFLNSSA
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgttcaactcgatgaccccaccaccaatcagtagctatggtgaaccatgctgtctccgg
cctcttcccagccaaggggtccccagcatgggaacagaaggactttctggtctgcccttc
tgccaccaaaccaatctcatgccaggccctcacagttatggacctgccagagagaccaac
aactgcaatgagggaccactctttcctcctccccggagctctgtcaagttgaccaagaaa
cgagcactctccatttcacctctgtcggatgccagcttggacctgcagacagttatccgc
acctcacccagctccctcgtggcattcatcaactcacgctgcacatctccaggaggctcc
tatggccatctctccatcggcactatgagcccatctctgggatttccaccccaagtgaat
caccaaaaggggacctctccttcctttggggtccagccctgtgttcctcatgactctact
cggagtgggatgatgccgcaccctcagtcccggggacccctccctacttgccagctgaag
tcagagctggacatgctggttaacaaatgcccagaggaacccttggaaggtgatatgtcc
agccccaactccacaggtacacaggatcacctgttggggttgctggatggacgggaggac
ctggagagagaagagaaacccgaacctgagtctgtgtatgagactgactgccgctgggat
ggctgcagccaggaattcgactcccaggagcaactggtgcaccacatcaacagcgagcac
atccatggggagcgaaaggagtttgtgtgccattgggggggctgctccagggagctgaga
ccattcaaagcccagtacatgctggtggtgcacatgcgcagacacacaggagagaagcca
cacaagtgcacgtttgaggggtgtcggaagtcttactcacgcctggaaaacctgaagaca
cacctgcggtcacacactggtgagaagccatacatgtgtgagcacgagggctgcagcaaa
gctttcagcaatgccagtgaccgtgccaagcaccagaatcggacccactccaatgagaag
ccatacgtgtgtaaactccctggctgcaccaaacgctacactgatcccagctcactccgc
aaacacgtcaagacggtgcatggtcctgatgctcacgtgacgaagcggcatcgaggagat
ggccccttaccccgggcacctaccctctccacagcagagcccaagagggagcgagaagga
ggccccatcgggggagagaacagactgactgtgcctgagggtgccatgaagccgcagcca
agccctggggcgcagtcttcctgcagcagtgatcattccccagcaggcagtgcagccaat
acagacagcggtgtggaaatgactggcaatgcagggggtagcaccgaggacctgtcaagc
ttggatgaggggccttgcattgctggcactggattatccactcttcgtcgtcttgagaac
ctcaggctggatcagctgcatcaactccgaccattagggcctcgtggtctcaaactaccc
agcttgacccacactggcacccctgtgtctcgtcgtctgggccccccagtttctcttgac
caccgcagcagcagctccagtagcatgagctctgcctatactgtcagccgtcgctcctcc
ctggcttcccctttcccacctggctccccaccagagaatggaacatcctccctgcctggc
ctgacacctgcccagcactacctgctccgggcaagatactcttcagccagagggggtggt
acaccacccactgcagcacccagcctggatcggatgggaggtcttcctgtacctccttgg
aaaagccgagctgagtacccaggatacaatcccaatgcaggggtcacccggagggccagt
gacccagcccgggctgctgatcgtcctgctccagttagagtccagcggttcaagagcctg
ggctgtgtccacacgccccctattgggacaactggaggacggaacttcgatccccacctc
tcaacttctgtctattcaccacagccccccagcatcaatgagaatgttgccatggatact
agagggctacgggaagagccagaggttggcacttccatgatgggcaatggtctgaatccc
tatatggactactcatctgctgatactctgggatatggtggaactgaaggggcagcagct
gagccttatggagctagaggtccaggttccctgccccttggtcctggcccaccgaccaac
tatggccccagcccttgtccccaacaggtctcttatcctgaccccactacagatacatgg
ggtgagctcccttcccactccgggctttacccaggcaccaaggctccaagtggagcctat
agtcactgccctcgacttgaacattatggacaagtgcaggtcaagccagaacaagggtgc
ccagtggggtctgactccacaggactggcagcctgcctcaatgcccaccccagtgagggg
cctccatgccctcagcctccattctcccactatccccagccccctcctccccagtatccc
caatcaggtccctatccccagccaccccctgattatctgccttcagaacccaggtcgagc
ctagattttgattctccttctcattccacagggcagctcaaggctcagcttgtctgtaat
tatgttcaatctcagcaagagctgctgtgggagggtgggggccgaggagaggccccaatc
caggaacctccttaccagagtcacaaatttctggggggttcccaggttagcccaagcact
accaaagccccagtggccacctatggacctggctttgcacccagcttgcccaatcacaag
tcaggctcctacccgacctcttcaccatgccatgacaattttgcagtgggaacaaacagg
gtttctcaccacagggcagtggcaccacctcggcttctgcccccactgcctacttgctat
ggacccctgaaggcaggaggcaccaaccccagctgcggccatcctgaggtgggcaggctg
ggagggggtcctgccttataccctcctcctgaagggcaagtgtgtaaccctctggactcc
cttgatctggacaacactcagctggactttgtggctattctggatgaggcccagggactg
agtcctccttcccacgatcaggaggacagctcagaacataccccccctccctccgggcct
cccaacatggctgtgggtaacatgagtgtcttgctgggatccctaccaggggagacacaa
ttcctcaattctagtgcctaa
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integrated database retrieval system
