Perognathus longimembris pacificus (Pacific pocket mouse): 125363601
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Entry
125363601 CDS
T08928
Symbol
Itga5
Name
(RefSeq) integrin alpha-5
KO
K06484
integrin alpha 5
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03266
Virion - Herpesvirus
plop04145
Phagosome
plop04151
PI3K-Akt signaling pathway
plop04510
Focal adhesion
plop04512
ECM-receptor interaction
plop04640
Hematopoietic cell lineage
plop04810
Regulation of actin cytoskeleton
plop04820
Cytoskeleton in muscle cells
plop05100
Bacterial invasion of epithelial cells
plop05133
Pertussis
plop05135
Yersinia infection
plop05165
Human papillomavirus infection
plop05168
Herpes simplex virus 1 infection
plop05205
Proteoglycans in cancer
plop05206
MicroRNAs in cancer
plop05410
Hypertrophic cardiomyopathy
plop05412
Arrhythmogenic right ventricular cardiomyopathy
plop05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
125363601 (Itga5)
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
125363601 (Itga5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125363601 (Itga5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125363601 (Itga5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
125363601 (Itga5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125363601 (Itga5)
04810 Regulation of actin cytoskeleton
125363601 (Itga5)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
125363601 (Itga5)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
125363601 (Itga5)
05205 Proteoglycans in cancer
125363601 (Itga5)
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125363601 (Itga5)
05165 Human papillomavirus infection
125363601 (Itga5)
09171 Infectious disease: bacterial
05135 Yersinia infection
125363601 (Itga5)
05133 Pertussis
125363601 (Itga5)
05100 Bacterial invasion of epithelial cells
125363601 (Itga5)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
125363601 (Itga5)
05412 Arrhythmogenic right ventricular cardiomyopathy
125363601 (Itga5)
05414 Dilated cardiomyopathy
125363601 (Itga5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plop04147
]
125363601 (Itga5)
04515 Cell adhesion molecules [BR:
plop04515
]
125363601 (Itga5)
04090 CD molecules [BR:
plop04090
]
125363601 (Itga5)
Exosome [BR:
plop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125363601 (Itga5)
Cell adhesion molecules [BR:
plop04515
]
Integrins
Integrin alpha subunits
125363601 (Itga5)
CD molecules [BR:
plop04090
]
Proteins
125363601 (Itga5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
ITGAX-like_Ig_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
125363601
NCBI-ProteinID:
XP_048218840
LinkDB
All DBs
Position
1:48558622..48584171
Genome browser
AA seq
1054 aa
AA seq
DB search
MGSRTPRFPLHAGQLRWGRRRRSPLPPLLPLLLLLLLPPPSRVGGFNLEAEAPAVLSGPP
GSFFGFSVEFYRPGTDGVSVLVGAPKSNTSQPGVLQGGAVYACPWSTRPAQCTPIEFDSK
GSRILDSSLSSTEEEEPLEYKSLQWFGATVRAHGSSILACAPLYSWRTEKEPLRDPVGTC
YLSTDNFTRILEYSPCRSDFSWVAGQGYCQGGFSAEFTKTGRVVLGGPGSYFWQGQILSA
TQEQIADSYYPEYLINLVQGQLQTRQASSVYDDSYLGYAVAVGEFSGDDTEDFVAGVPKG
NLTYGYVTILNGSDIRSLYNFSGEQMASYFGYAVAATDINGDGLDDLLVGAPLLMERTAD
GRHQEVGRVYVYLQHSAGIEPVPTLTLTGHDEFGRFGSSLTPLGDLDQDGYNDVAIGAPF
GGETQQGVVFVFSGGPKGLGSKPSQVLQPLWAAGHTPDFFGFALRGGRDLDSNGYPDLIV
GSFGVDKAIVYRGRPIVSASASLTIFPAMFNPEERSCSLEGNPVSCINLSFCLNASGKHV
PNSIGFTVELQLDWQKQKGGIRRALFMASRQATLTQTLLIQNGAREDCREMKIYLRNESE
FRDKLSPIHIALNFSLDPQAPLDSHGLQPVLHYQSKNRIEDKAQILLDCGEDNICVPDLQ
LQVYGEQKHVYLGDKNAVNLTFHAQNMGEGGAYEAELRVTAPPEAEYSGLIRHPGNFSSL
SCDYFAVNQSRLLVCDLGNPMKAGASLWGGLRFTVPHLRDTKKTIQFDFQILSKNLNNSQ
SNMVSFLLSVEAQAQVSLNGVSKPEAVLFPVTDWHPRDQPQKEEDVGPAVHHVYELINLG
PSSISQGVLELSCPQALEDQQLLYVTRVTGLSNCTDSHLINSQGLELDPEGPSHHLQKRE
APGRSPASSGAKVLKCPEAQCLRIRCELGPLHRQESRTLQLHFRIWAKTILQREYQPLSL
QCEAVFEAMKMPYRILPQQLPQKKLQVATAVQWSKAEGSNGVPLWIIILAILFGLLLLGL
LIYILYKLGFFKRSLPYGTAMEKAQLKPPATSDA
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggggagcaggacgcctcggttccctctccacgccgggcagctgcgctgggggcgccgg
cgccgatccccgctacccccgctgctgcctctgctgctgctgctgctgctgcctccccca
tccagggtcgggggcttcaacttggaggccgaggcccctgcagtgctctccgggcccccg
ggctccttcttcggcttctcggtggagttttaccggccgggcacagacggggtaagcgtg
ctggtgggggcccccaagtctaacaccagccagccaggagtgcttcaggggggtgctgtc
tacgcctgtccctggagcaccaggcctgcgcagtgcacccccatagaatttgacagcaaa
ggctcccggatcctggactcctcactgtccagcacagaggaagaggagcctttggagtac
aagtccttgcagtggttcggagccacggttcgagcccatggctcctccatcctggcatgt
gctccactgtacagctggcgcacagagaaggagccactgagagaccccgtgggtacctgc
tacctctccacagacaacttcacccgaatccttgagtactcgccttgccgctcagatttc
agctgggtggcagggcagggatactgccaaggaggcttcagtgccgagttcaccaagacc
ggccgtgtggtcctaggtggaccaggcagctacttctggcaaggccagatcctgtccgcc
actcaggagcagattgctgactcctattacccagagtacctcatcaacctggtccagggg
cagctgcagacccgccaggccagctccgtgtatgatgatagctacctgggatatgccgtg
gctgtgggtgaattcagtggcgatgacacagaagacttcgttgccggcgtacccaaaggg
aaccttacctatggctacgtcaccatccttaatggctcagacatccgatcactctacaac
ttctcaggggaacagatggcctcctacttcggctatgctgtggctgccactgacatcaac
ggggatgggctggatgacctactggtgggggcgcccttgctcatggaacggacagctgac
gggcggcatcaggaggtgggcagggtctatgtctacctgcagcactcagctggcatcgag
cctgtacccacccttacccttactggtcacgatgagtttggtcgatttggcagctccttg
acccccctgggggacctggaccaggatggctataatgatgtagccattggagctcccttt
ggtggggagacccagcaaggagtagtgttcgtattttctgggggaccaaaagggctaggc
tcaaagccttcccaagttcttcagcccctgtgggcagctggccacaccccagacttcttt
ggctttgcccttcgaggaggccgagacttggatagcaatggatatcctgatctgattgtg
gggtcctttggagtggacaaggccatagtatacaggggtcgtcccatcgtgtctgccagt
gcctccctcaccattttccctgccatgttcaacccagaagagcgtagctgcagtttggag
gggaaccctgtatcttgcatcaatctcagcttctgcctcaatgcttctggaaaacacgtc
cccaactccattggcttcacagtggaactccaactggactggcagaagcagaagggaggg
atacgtcgggcactgttcatggcctccagacaggcaaccttgacccagaccttgctcatc
cagaatggggctcgagaggactgcagagagatgaagatctacctcaggaatgagtcagaa
ttccgagacaagctctctccgattcatattgccctcaacttctccttggacccccaagct
cccctggacagccatggcctccagccagttctgcattaccagagtaagaatcggatagaa
gacaaggctcagatcttgctggactgcggagaggacaacatttgtgtgcctgacctacag
ctgcaagtgtatggggagcagaaacatgtgtacctgggtgacaagaacgcagtgaacctc
actttccatgcccagaacatgggtgagggcggcgcctacgaggctgagcttcgggttacg
gcccctccggaggccgagtactcaggactcatcagacacccagggaacttctccagcctc
agctgtgactacttcgcagtgaaccagagccgtctgctggtgtgcgacctgggcaacccc
atgaaggcaggggccagcctctggggtggccttcggttcactgtacctcatctccgggac
acaaagaaaaccattcagtttgacttccagatcctcagcaagaatctcaacaactcacaa
agcaatatggtctccttcctgctctccgtggaggctcaagcccaggtctctcttaacggt
gtctccaagcctgaggcagtgctcttcccagtcactgactggcaccctcgagaccagcct
cagaaggaagaagacgtgggccccgctgtccaccatgtctatgagctcatcaacctgggc
cccagctccatcagccagggtgtgctggagctcagctgtccccaggctctggaagaccag
cagctcctctacgttaccagggttacaggactcagcaactgtaccgacagccacctcatc
aactcacagggcctggagctggaccccgagggcccctcacaccacctgcagaaacgagaa
gccccaggccgcagtcctgcctcctcaggggcaaaggtcctgaaatgcccagaagctcag
tgtttaaggatacgctgtgaacttgggccactacaccggcaagagagccgaactctgcag
ctgcatttccgaatctgggccaagaccatcctgcagcgggaataccagccacttagcctg
cagtgtgaggctgtgttcgaagccatgaaaatgccctaccggatcctgcctcagcagctg
ccgcaaaagaaacttcaggtggccacggcggtacagtggagcaaggcagaaggcagcaat
ggcgtcccactgtggatcatcatcctagccatcctttttggacttctgcttctgggtctg
ctcatctacatcctctataagcttggcttcttcaagcgttccctcccatacggcacagcc
atggaaaaagctcagctcaagcctccagccacctctgatgcctga
DBGET
integrated database retrieval system