Perognathus longimembris pacificus (Pacific pocket mouse): 125368470
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Entry
125368470 CDS
T08928
Symbol
Apoe
Name
(RefSeq) apolipoprotein E
KO
K04524
apolipoprotein E
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04979
Cholesterol metabolism
plop05010
Alzheimer disease
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
125368470 (Apoe)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
125368470 (Apoe)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plop04147
]
125368470 (Apoe)
00536 Glycosaminoglycan binding proteins [BR:
plop00536
]
125368470 (Apoe)
Exosome [BR:
plop04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
125368470 (Apoe)
Glycosaminoglycan binding proteins [BR:
plop00536
]
Heparan sulfate / Heparin
Others
125368470 (Apoe)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Apolipoprotein
Baculo_PEP_C
ApoLp-III
DUF1043
Filament
PIN_8
Prominin
Phage_Mu_Gam
DUF4407
Glyco_transf_18
DUF1690
KxDL
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
125368470
NCBI-ProteinID:
XP_048225410
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All DBs
Position
20:20484517..20488307
Genome browser
AA seq
307 aa
AA seq
DB search
MKILWAVLVVTLLAGCQAELEPELEPEVPERSPWQAGQPWEQALSRFWDYLRWVQTLSDQ
VQEELLSSQVTQELTALMEETMKEVKAYKSEVESQLSPMAVETQARLNKELQAAQARLEA
DMEDVRTRLAQYRTEVQTMLGQSTEEMRARLASHLRKLRKRLSRDAEDLQKRLAVYGAGA
REGAERGVSAIRERLGPLVEQGRVRAAGLDAGAAQPLRDRAQALGTRLRGRLEEVSSQAR
DRLEEVRVQMEEVRAKVEQQAEAFQSRLKSWFEPLVEDMQRQWAELVEKMQAALGTNAVP
VPAIDNH
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctgtgggctgtgttggtggtcacattgctggcaggatgccaggcagagctg
gagccagagctggagccggaggtgcctgagcgctcgccatggcaggcgggccagccctgg
gagcaggcgctcagccgcttctgggattacctgcgctgggtgcagactctgtccgaccag
gtgcaggaggaactgctcagctcccaggtcacccaggaactgacggcgctgatggaggag
accatgaaggaagtaaaggcgtacaaatccgaggtggaaagccagctgagccccatggcg
gtggagacccaggcccggctgaacaaggagctgcaggcggcccaggcccggctggaggcg
gacatggaagacgtgcgcacgcggctggcacagtaccgcaccgaggtgcagaccatgctg
ggccagagcacggaggagatgcgggcacgcctggcctcgcacctgcgcaagctccgcaag
cggctgagccgcgacgccgaggacctgcagaagcgcttggctgtgtacggggccggggcc
cgcgagggcgccgaacgcggggtcagcgccatccgcgagcggctggggccgctggtggag
cagggccgcgtgcgagccgccggcctggacgccggtgctgctcagccgctgcgcgaccga
gcccaggccctgggcacccggctgcgaggccggctggaggaggtgagcagccaggcccgc
gatcgcctggaagaggtccgcgtgcagatggaggaggtccgcgccaaggtggagcagcag
gccgaggccttccagtcccgcctcaagagctggttcgagccccttgtggaagatatgcag
cgccagtgggccgagctggtggagaagatgcaggccgctctgggcaccaacgccgtccca
gtgcccgccatagacaaccactga
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