Pseudomonas lundensis: AA042_07110
Help
Entry
AA042_07110 CDS
T05473
Name
(GenBank) type VI secretion protein
KO
K11895
type VI secretion system protein ImpH
Organism
plq
Pseudomonas lundensis
Pathway
plq02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
plq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
AA042_07110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
plq02044
]
AA042_07110
Secretion system [BR:
plq02044
]
Type VI secretion system
Imp/Vas secretion system core components
AA042_07110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_TssG
Motif
Other DBs
NCBI-ProteinID:
AOZ12453
LinkDB
All DBs
Position
complement(1606287..1607294)
Genome browser
AA seq
335 aa
AA seq
DB search
MDTAHGLAAPALSGLSTRIREYSLYQAVLLVMDRLREGNPDISDDALYERLEFVANPSLG
FPGCDVEHVTFFTEHGQLRARLCFNLMGLVGSSSPLPAFYAEQALEEGDEANVTRGFLDL
FHDRLQRLMLPIWRKYRYGARFQRGATDPFSSQLFALIGLGGEQIRQAQGLNWRRLLPYL
GLLSLRAHSAALIESVLRYYFKHAALTIEQCIERRVVIAPEQRNALGLGNHQLGDSLVLG
ERVRDRSGKFRIHIRDLDWQRFHEFLPIGEGYQPLCALVRFTLRDPLDYDIRLQLRHEEV
RELRIGAHNTCRLGWTSWLGRERADGVVTLNSTLH
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgcgcatgggcttgcagcccctgctttgagcgggctgtccacacgcatacga
gagtactcgctgtatcaggcggtgttgctggtcatggaccgattgcgtgaaggcaatccg
gacatcagcgatgacgcgctgtacgagcgtcttgaattcgttgccaaccccagcctgggg
tttccgggctgtgatgttgagcacgtgacgttttttaccgaacacggccagcttcgcgcg
cgtttgtgtttcaacctcatggggttggtgggctcgtcttctccgctgcccgcgttttac
gccgagcaagcgctggaggagggcgacgaggccaatgtcacgcgcgggtttctggatctc
tttcatgatcgcttacagcgtttgatgttgccgatctggcgcaaataccgctacggcgcc
cgctttcaacgaggcgcgacagacccgttttccagccagttattcgccctgatcgggttg
ggtggcgaacagattcgtcaggcgcaagggctgaattggcggcgcttgctgccctatctc
gggctcctgagtttgcgggcacattcggcggccctgattgagtcagtgctgcgttactac
ttcaagcacgcggcgctgacgatcgagcaatgcatcgagcgccgagtcgttatcgcgcct
gagcaacgcaatgccttgggcctgggcaatcaccaactcggtgacagcctggtgctgggg
gaaagggttcgcgaccgcagcggcaaattccgcattcacatccgcgacctggactggcaa
cgcttccacgaatttctgccgattggcgagggctatcagccgctgtgcgcgctggtgcga
ttcaccttgcgtgacccgctggactacgacatccggctgcaactgcgccacgaagaagtg
cgcgaactgcgtattggcgcgcacaacacctgccgactcggctggaccagctggctgggg
cgcgagcgggcggacggcgtcgtgaccctgaacagcacacttcattaa
DBGET
integrated database retrieval system
