Planctomyces sp. SH-PL14: VT03_20560
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Entry
VT03_20560 CDS
T04354
Symbol
barA_3
Name
(GenBank) Signal transduction histidine-protein kinase BarA
Organism
pls
Planctomyces sp. SH-PL14
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
Response_reg
HisKA
AAA_16
Pkinase
TPR_12
TPR_2
AAA_22
GAF_3
TPR_16
ATPase_2
DUF2884
TPR_9
Motif
Other DBs
NCBI-ProteinID:
AMV20302
UniProt:
A0A142X0Q5
LinkDB
All DBs
Position
5321110..5327061
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AA seq
1983 aa
AA seq
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MKVVPTGVRSGHSAPEGSLLAGRFRVAQTVRHSPSSTAYLAEDITTGRDIFLRLIPTDGA
SPGAMARMEQEAAVLEGIGSPRISSLLAHGQEKRHFWFAFSRPAGRSLASHLRSARLDCR
PALELFRSLLSGLRELHGRGLLHRSLRPDSLFLEDLKQPAGVEIAGYFSPDAVTILQREG
SHTPRLIDVVRYLPPEQTGVVDEPLSEASNLYSAGCILFECLSGRTPFEGTSLNELLHRQ
ATRPAPQIREIGVPVPRVVDEILQRCLARDSRVRYQSVEAVEADVEALLERLNQGETDPD
LGVGAQDRRGVLVESAFVARAEELRQLNEAFAATLAGDADLTFVEGESGFGKTRLLSEFS
VRISQTGAIVLRGRATTESSHQPLEVIDGVAAGVMTLAHARPELEQRLRSRLSTDLPLLA
ESLPTLGPLASDASGIVGDAGPGGESRTLGAIARLFDALGTPQEPVVILLDDCQWAADLV
HRLLQHWRVVQADRPAGTRHVQIVVSFRADEVPPSHPLRRVPHAHMVRVGALGADDIRRL
AESMAGRLPEAALETVIRLSDGVPFMASAILHGLVETQAILPGPEGWRVDESVLTQAGFA
TQAASFLSRRLDLLAPEVRRFLAAGAVLGRTFDLKFAMELSGVRAEGAFAAAQEARQRHL
LWLNHHDGSGTFSHDRIRESLLGQLTEEEIRRLHRQVADYLETAHPDRIAELAHHFDAAG
EHPRALRYAVEAARRAHQHHALELAEEQYRIAQRGVTGAARSTQFLVADGLGEVLMLRGK
YEGAQRLFDLAARLADGPAAEADVRSKQGELYMKRGDMEAAAQEFERGLALLGASIPRNR
VSLGIKLVVEAVVQVAHTLLPRLFVHTRMRTPDPRERLALRLYSGLSHACWYCRSLPLAM
WAHLRGMNCGEVFLPSLELAQIYSNHAPAMVLTAAYRRGEQYALKSLQIRRQLGDQWGQG
QSYHYHGIVLYAAARYDECIEKCRQSIQILERMGDLWQVHIARYQIAACLYRLGDLEGAL
EECRRNYASGITLGDEQASGIILDVWVRATGGSLPPHIIDQELARSRTDAQGQAQVLLAK
AIQLIATGDPLQAVELLERARETVRRAGVSNPYTLPIRAWLVTAWRTSAQADASLGPARR
TAGLRRGAWELRKAMLEAWRYPHELPHLYRELGLIEAMLGRPRRAWRAFEKSLRAAERLD
AQVESAVTRTARARLSREMGWTDPAPPVNLRAARLRSGDSLIRRLESALRIGEEAAPTIS
LVDRFDMLLKSGRTITSALSFTLIGKAVQTAAERLLRSERVFLVPVDAQGHPSTPSERGG
LDYDEALVLRAIELRQVVSAEPSERTGLRNAHAALCAPVMVRGDITCVLYSVCPDLRQAV
GTDEERIADFIATLAGAALENAEGFQQLQQLNATLEERVRDRTAAVQERAEQLAASNEEL
ARVANELREAEVQLVASTHAAQDANRAKSRFLAAMSHEIRTPMNGIIGMAELALSTELTE
RQRGYLNTVGRSARSLLAMLNDVLDFSKIEAGKMDIDAIPFDLHETVADAARLLAVPIAA
KGLDLDVRIAADVPAQATGDPNRLRQILVNLIGNALKFTSRGRIGITVTRESQPAGWGLA
ETGQIHFVVTDTGIGISPQNQQRIFEAFDQGEASVTRRFGGTGLGLSISSQLVALMHGRI
WVESQEGVGSAFHVALPLPVSPVLMTTVAGPSAAREAESWVVFARDPSVVALHEQRLSAT
GREVWGTSLFSEAKSHYFERPASARPLSLLIDLPLQAAHELSLIERLIDEQHVAPADVVA
LIPGGAEAIYQALAGRGIQTIIEKPVTPAALVEVLDRRSASAGLPIATDSAAAPTDTGLR
ILVVDDSEVNRDVAEGLLEILGHLPATADSGAAALERLAAETFDVVLMDIEMPEMDGLTA
ARRYRDQEGETETPLPILAMTAHAAGGFHRECEKAGMTGLIHKPVQPEELKRILAAIPAR
TVR
NT seq
5952 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcgtccccacgggagtccgttcaggacattccgcgccggagggttccctcctg
gcgggacgctttcgcgttgcgcaaacggtccgccactccccgtccagcaccgcgtacctc
gcggaggacatcaccaccgggcgggacatcttcctgcggctgatccccaccgacggagcc
agccccggtgccatggcccggatggaacaggaggcggccgtcctggaagggatcgggtct
ccccggatctcctccctcctggctcatgggcaggagaagcgccacttctggtttgccttc
agccggccggcgggacgctcgctcgccagccacctccgctccgcccgcctcgactgccgg
cccgcccttgagctgttccgctcgctcctctccgggctgcgggaactccacggccgggga
ctgctgcaccgctccctccggcccgacagcctgttcctcgaagacctcaagcagcccgcc
ggcgtcgagatcgccgggtacttctcgccggacgccgtcacgatcctgcagcgcgaaggg
agccacaccccccgcctgatcgacgtcgtccgctacctcccccccgaacagaccggggtc
gtcgacgagcctctttccgaggcctcgaacctctactcggccggctgcatcctgttcgaa
tgcctgagcggccgcaccccgttcgaagggacgtcgctcaacgaactcctccaccgccag
gcgacccgccccgctccccagatccgcgagatcggcgtccccgtcccccgcgtcgttgac
gagatcctccagcggtgcctcgcgcgggacagccgcgtccggtaccagtcggtcgaggcg
gtcgaggcggacgtcgaggccctcctcgaacggctgaaccagggagagaccgacccggac
ctcggcgtcggcgcgcaggaccggcggggcgtcctcgtcgaatcggcgttcgtcgcccgg
gccgaggaactgcggcagctcaacgaggcgttcgccgcgaccctggcgggggacgcggac
ctcacgttcgtcgaaggggaatcgggcttcggcaagacgcggcttctctcggagttcagc
gtccgcatctcgcagaccggggccatcgtcctgcggggccgggccaccacggagagcagc
caccagccgcttgaagtcatcgacggagtcgccgcgggcgtcatgaccctcgcccacgcg
cggcccgaactcgaacagcggctgcggagccggctctcgaccgaccttcccctcctggcc
gaatcgcttccgaccctcggcccgctggcgagcgacgcctccgggatcgtcggcgacgcg
gggcccggcggcgagtcccgcacgctcggagcgatcgcccgcctgttcgacgccctcggc
accccgcaggagccggtcgtcatccttctcgacgactgtcagtgggccgccgatctcgtc
caccggctgctccagcactggcgggtcgtccaggcggaccgccccgccgggacgcgtcac
gtccagatcgtcgtctcgttccgcgcggacgaagtccccccctcgcacccgctgcggcgg
gtcccgcacgcccacatggtccgcgtcggggcgctcggcgcggacgacatccggcggctg
gcggagtcgatggccgggcggctccccgaggcggccctcgagaccgtcatccgcctttcg
gacggcgtgccgttcatggcctcggcgatcctgcacggcctggtcgaaactcaggcgatc
ctccccgggcccgagggatggcgggtcgacgagagcgtcctgacccaggcgggcttcgcg
acgcaggccgcctcgttcctgtcgcggcgtctcgacctgctcgctcccgaggtccgccgg
ttcctggcggccggcgcggtcctgggacggacgttcgacctcaagttcgccatggagctc
tccggcgtccgggccgagggagcctttgccgccgcgcaggaagcccggcagcggcatctc
ctgtggctcaatcaccatgacgggagcggaaccttctcccacgaccggatccgcgaaagc
ctcctcgggcagctcaccgaggaggagatccgccggctgcatcgccaggtggcggactac
ctcgaaacggcgcatccggaccggatcgccgagctggcccaccacttcgacgccgccggc
gagcatccccgcgccctgcggtacgccgtcgaggcggcccgccgcgcccatcagcaccac
gccctcgagctggcggaggagcagtaccgcatcgcccagcggggagtgaccggagcggcg
cggtcgacgcagttcctcgtcgccgacgggctgggcgaagtcctgatgctccgcgggaaa
tacgaaggggcccagcggctgttcgacctggccgcccgcctcgccgatggtcccgccgcc
gaagcggacgtccgcagcaagcagggcgagctgtacatgaagcgcggggacatggaggcc
gccgcccaggagttcgaacgggggctcgcgctgctgggggcctcgatcccccgcaatcgc
gtgagcctggggatcaagctggtcgtcgaggcggtcgtccaggtcgcccacacgctcctc
ccccggctgttcgttcacacccggatgcggacccccgatccgcgcgagcggctggcgctg
cggctctacagcggtctctcgcacgcctgctggtattgccgcagcctgccgctggcgatg
tgggcccacctccgcgggatgaactgcggcgaagtcttccttcccagcctcgagctggcg
cagatttattcgaaccacgccccggcgatggtcctgaccgccgcctaccgccgcggcgaa
cagtacgccctcaagtccctgcagatccgccgccagctcggcgaccagtggggccagggg
cagtcgtaccactatcacggcatcgtcctctacgccgccgcgcggtacgacgagtgcatc
gagaaatgccggcagtcgatccagatcctggagcggatgggcgacctgtggcaggtccac
atcgcccgctaccagatcgccgcctgcctgtaccgcctcggcgacctcgaaggggccctc
gaggaatgccgccgcaactacgcctcggggatcacgctcggcgacgagcaggcctcgggg
atcatcctcgacgtctgggtccgggcgaccgggggcagcctcccgccgcacatcatcgac
caggaactggcccgctcccggaccgacgcccaggggcaggcccaggtcctgctcgccaag
gcgatccagctcatcgcgaccggcgatccgctccaggcggtcgagctgctggaacgggcc
cgcgagacggtccggcgggccggcgtcagcaatccttacacattgcccatccgcgcctgg
ctcgtgaccgcctggcggacgagcgcccaggccgacgcctcgctcggtcccgcgcgacgg
accgccggcctccggcggggggcatgggaactccgcaaggcgatgctggaggcgtggcgg
tatccgcatgagctgccgcatctctatcgcgaactgggactgatcgaggcgatgctcggc
cgtccgcggcgggcgtggcgggcgtttgagaagagcctccgcgccgccgaacggctcgac
gctcaggtcgagtccgccgtcacccggaccgcccgggcccggctctcccgcgagatgggc
tggaccgaccccgctcccccggtgaatctccgcgcggcgcggctccggagcggcgactcc
ctcatccggcggctcgagtccgcgctgcggatcggtgaggaggcggctcccacgatctcg
ctcgtcgaccgcttcgacatgctgctcaagtcgggacgcacgatcacctccgcgctgtcg
ttcacgttgatcggcaaggcggtccagacggcggcggaacggctgctgcggtcggagcgg
gtcttcctggtgccggtcgacgcgcagggacacccgtcgaccccgtcggagcggggaggg
ctcgactacgacgaggcgctcgtcctgcgggccatcgagctgcggcaggtcgtttcggcg
gagccttcggagcggaccggcctgcggaacgcccacgcggccctctgcgcgcccgtgatg
gtccgcggcgacatcacctgcgtcctgtactcggtctgcccggacctgcggcaggcggtc
gggaccgacgaggaacggatcgcggacttcatcgccacgctggccggcgcggcgctcgag
aacgccgaaggcttccagcagctccagcagctcaacgccacgctggaagagcgggtccgc
gaccggaccgccgcggtccaggagcgggcggagcagctcgccgcctccaacgaagagctg
gcccgcgtcgccaacgagcttcgcgaggcggaggtccagctcgtcgcctcgacccacgcc
gcccaggacgccaaccgggccaagagccggttcctggccgcgatgagccacgagatccgc
acgccgatgaacggcatcatcgggatggcggagctggcgctctcgaccgagctgaccgag
cggcagcgcggctatctgaacacggtcggccgctccgcgcggtcgctcctggcgatgctc
aacgacgtcctcgacttctccaagatcgaggcggggaagatggacatcgacgccatcccg
ttcgacctgcacgagacggtcgccgacgccgcccggctcctggcggtcccgatcgccgcc
aaggggctcgacctcgacgtgcggatcgccgccgacgtcccggcccaggcgaccggcgat
ccgaaccgcctccggcagatcctggtcaacctgatcggcaacgccctcaagttcacctcc
cgggggcggatcggcatcacggtcacgcgggagtcgcaaccggccggatggggactggcg
gagacggggcagatccacttcgtcgtcaccgacaccgggatcgggatctcgccgcagaac
cagcagcggatcttcgaggcgttcgaccagggggaggcgtcggtcacgcggcggttcggc
ggaaccggactcgggctgtcgatctcgtcgcagctcgtggcgctgatgcacggccggatc
tgggtcgagagccaggaaggggtcggaagcgcgttccacgtcgccctgccgctgccggtc
tcgccggtgctgatgacgaccgtcgcggggccttccgccgcgcgggaggcggaatcgtgg
gtcgtcttcgcccgcgatccctcggtggtcgccctgcatgagcagcgtctctccgccacc
ggacgggaggtctgggggacgagcctcttcagcgaggcgaagagccactacttcgagcgg
cccgcctccgcccgtccgctttcgctcctcatcgacctgccgctccaggcggctcacgag
ctgagcctgatcgagcggctcatcgacgaacagcacgtcgccccggccgacgtcgtggcc
ctcatccccggcggggccgaggcgatctaccaggcgctcgccggccgcggcatccagacg
atcatcgaaaagccggtcaccccggcggccctcgtggaggtgctggaccgccgcagcgcc
tcggccggtctcccgatcgcgaccgactcggccgcggcgccgacggacaccggtctgcgg
atcctggtggtggacgacagcgaggtgaaccgcgacgtggcggaggggctgctggagata
ctcggccacctgccggcgacggccgacagcggcgccgcggcgctcgagcggctggcggcc
gagacgttcgacgtggtcctgatggacatcgagatgccggagatggacggcctgaccgcc
gcccgccgctaccgcgaccaggaaggggagaccgagacgccgctcccgatcctggcgatg
acggcccacgctgccggcggattccaccgcgagtgcgagaaggcggggatgaccggcctg
atccacaagccggtccagcccgaagagctcaagcggatcctcgccgccattccggcccgc
accgtgcggtaa
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