Paenibacillus lycopersici: GXP70_26425
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Entry
GXP70_26425 CDS
T07013
Name
(GenBank) multidrug efflux MFS transporter
KO
K08168
MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
Organism
plyc
Paenibacillus lycopersici
Module
plyc_M00704
Tetracycline resistance, efflux pump Tet38
Brite
KEGG Orthology (KO) [BR:
plyc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plyc02000
]
GXP70_26425
01504 Antimicrobial resistance genes [BR:
plyc01504
]
GXP70_26425
Transporters [BR:
plyc02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-2 (14 spanner) (DHA2) family [TC:
2.A.1.3
]
GXP70_26425
Antimicrobial resistance genes [BR:
plyc01504
]
Gene variants
Tetracycline resistance genes
Transporters
GXP70_26425
Gene sets
Vancomycin resistance modules
Tetracycline resistance, efflux pump Tet38 [MD:
M00704
]
GXP70_26425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
MFS_3
Motif
Other DBs
NCBI-ProteinID:
QHT63149
UniProt:
A0A6C0G5V7
LinkDB
All DBs
Position
6035410..6036768
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AA seq
452 aa
AA seq
DB search
MNDRVVMPIWMFGVFIVIMNTTMFNVSIPSIITDYRITADLGSWIISSYSIGYALSTIIY
SRLSDSVPMRKLLLVGLTILGLSSALGIFARSFDMLLAVRILQSAGAGTMAGLGLVMASR
YIPYERRGRAIAMISTGSAMAFGFGPIIGGVISEYFGVNGLFAVTCLILLVLPVLMRLLP
REEPKPLQFDMTGALLTTVNVVTLLVAIMQRSFYWFSGSLLSLLIHAWHLRRRDRQTFIN
PALFAKKDYRKLTAIGFCALVLNLGNLFLMPLALANLDGESAIKIGLTIAPGALLSAFLT
RFVGKWIDRHGNIRFLLIGHCMLAVVLAVFSFALEVSPLVVLCGYLCFSPSFSATLSSLN
NETSRILPKPLIGSGMGLMQLIQFFGGSVSVAAFGLILALQKNVPIGRAYENVYRILLLV
CLLSLAILVWYIRTAGKPERVPRETPRAQPAS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaccgcgttgtcatgccaatctggatgtttggcgtgtttatcgtcattatgaat
acaaccatgtttaacgtatcgatcccgagcatcattacggattatcgcatcacggccgat
ctgggatcgtggatcatatccagctactccatcggctacgccctgtcgaccatcatctac
agccgtttatccgacagcgttccgatgcggaagctgctgctggtcggactgacgatcctc
ggtttatcctcggcgctcggcattttcgcgcgcagcttcgacatgctgctggccgtgcgc
atcctgcaatcggcaggcgcgggtacgatggccggcctcgggctcgtcatggcgagccgc
tacattccctatgaacggcgaggacgcgcgattgcgatgatctcgacggggagcgcgatg
gcgttcggcttcgggccgattatcggcggcgtcatcagcgagtatttcggcgtgaacggc
ttgttcgccgtcacctgtctgattctcctcgtgcttccggtattgatgcgcctgcttccc
cgcgaagaaccgaagccgctgcaattcgacatgacgggcgccctgcttacgaccgtgaat
gtcgtgacgttactggtcgcgatcatgcagcgctcgttctattggttcagcggaagtctg
ctctcgttgctgatccatgcctggcatctgcggaggagggaccggcaaacattcatcaat
ccggcgctgttcgccaagaaggactaccgcaagctgacggcgatcggcttctgcgccttg
gtgctgaacctgggcaatctgttcctcatgccgctcgcattagccaacctggatggcgaa
tcggcgatcaagatcggcttgacgatcgcgccgggggcgttattgtcggccttcttgacc
cgcttcgtcgggaagtggatcgaccggcacgggaacatccggtttttgctgatcggccat
tgcatgttggccgtcgtcctggcggtattctcgtttgcgctggaggtttcgccgctcgtg
gtcctgtgcgggtatctctgcttctcgccctcgttctccgcgacgctgtcttcgctcaac
aacgagacgtcccgcatcctgccgaagccgctgatcggctcgggcatgggcttgatgcag
ctgattcaattcttcggcgggtcggtctccgtcgcggcgttcggcttgattctggccctg
cagaagaacgtcccgattggccgcgcctacgagaatgtctaccgcattctgctcctggtc
tgcctgctctccctcgccattctcgtctggtacatccggacggcaggcaagccggaacgg
gtgccgcgcgaaacgccgcgcgcgcagccggctagctga
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