Paenibacillus lycopersici: GXP70_28245
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Entry
GXP70_28245 CDS
T07013
Name
(GenBank) hypothetical protein
KO
K21449
trimeric autotransporter adhesin
Organism
plyc
Paenibacillus lycopersici
Brite
KEGG Orthology (KO) [BR:
plyc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plyc02000
]
GXP70_28245
Transporters [BR:
plyc02000
]
Other transporters
Pores ion channels [TC:
1
]
GXP70_28245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_5
SWM_repeat
SLH
Collagen_bind_2
Motif
Other DBs
NCBI-ProteinID:
QHT63460
UniProt:
A0A6C0G6P0
LinkDB
All DBs
Position
complement(6451346..6455761)
Genome browser
AA seq
1471 aa
AA seq
DB search
MVRNRKWSSFIIAAIVLLQFVVGGLAVEPMRVKADAAGPVLTSKSPSASATNVRPDTSLL
LTFDQNVKKGTGGATIQIRKQISNELVESFDTANSGRVAIGTGSNRNVVTITPTSSFALN
TSYYVTIDPGAFVSESDNSVFTGLTSALDWSFTTIASVDTTNPVLDTNTPLQPANNATVG
ISTGLKMKFNKPVFAASGTITVTNTNPRQSWDSQAINVNSTNVSGSSTSTITIVLPNSLQ
GSSEYTVSIPNGAFKDAAGNPFMNAPAWTFKTSAPPLGSPTLSPQDDAYGVSVSTPLVLS
FPVKVAKNSGYIWINKIADNTSVQQINVASSSVVLANNAIGGTDVTITPSTLDPNTGFYV
LIDANAFKGATDASLLYQGISDARYWSFSTNPGNDQTPPTLVADQRKPLATQATLTPELE
LNFSEPVYPGTGNITIRSYPSGSVFAAIPVTSTSVTGGGTTKIKVGNVNKTYTNNTTYYV
EIGGQAFSDASGNYYAGITGDSGWRFTVTSDTDKPTLVLQLPANGATNVPLQGAKLEATF
SEPIMLGTNTSAIKLKRISGSTASIATTFAIDPTNNRKLLITVNGTLTASTDYYVEMGAG
VVTDLAGNAFDGILNQYQWTFRTSSTTSGPPKVSKAELVGTNKIRMTFNENLNENVTPLP
ANFYVTVNGAMRVVSAVAVSGQYVTLTLQSDVAAGQTVKVSYSAGTAPIQDLSGIEAANF
SNLNVTNVADTTAPYQVSGSINGNTVILTFSEELASISTYAYSQFSLNINGSYSSVTSIS
GSGNLVVLTYGGQAATIGQTVSVSYYSSSSYALKDLAGNALASFSGFYIQNGYDAKAPAL
QSATASGAQITLGYDEALNPSLIPPRTAYALSVNGKSRSVSGVSVGGAQVVLTVSPAIAV
GDSVLLSYTVGSPALSDLGGNAALAFNGTAVNTGTGGSSALALNGIIAKGANVTLSFSAE
LNTGYVPTISQFAVKVNNVSRPILNTAISGSAVVLTLATAINIGDTVKVSYTNSGYGPRS
TTGAVPASFTDTAAANQTTWSDGVNSEYEAAAGGGLSIKISEAATTSAVSPAGISAKQYA
LTSEKVTNAYNAIRSVSGTAPRLVLTIPDTENAAIAAFPLGALEDAKKLMSNASIVVAYK
AITYEIPLSALNFTQLAQMMNAGSAVGQLVISIDTNASSLASSLNTQLSAAKAQTLVSPV
SFQVSVTNNGLTKPVETLNGYVTRTITTSANLDGRQVAVVWLDPQSGKLSYVPTTVQQVN
NQSVVTFKRKGNSVYAVVKGATSFTDLNNHWARNDILLLANKYIVEGSTLTTFAPKKAIT
RGEFAMFIAKGLGLTGDRAAAAKFKDVNTSTSLAAYIGAAATAGIVQGMTDGSFKPNNPV
TREEMATMMVRAIGVAGIQVTLQGSAADTLKKFSDRGKVGTWAQTDVAKAVQAGIINGQT
TSTFGGKNNATRAEAAVMVKRLLDYVGFLDS
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
gtggtccgaaatcgcaaatggtcatcatttattattgcagcaatcgtgcttcttcaattc
gttgttggcggattggcggtcgaaccgatgcgggtgaaggcggacgcagccggaccggtc
ttgacaagcaaatccccttcggcgagcgcgacgaacgtgaggcccgatacgagcctcttg
cttaccttcgatcagaacgtgaagaaggggaccggcggcgcgacgatccagattcgcaag
caaatctcgaacgagcttgtcgaatccttcgatacggcaaatagcggcagagtcgcgatc
gggacgggctcgaaccgcaatgtggtgacgattacgccaacgagcagttttgccctgaat
acgagctactatgtaacgatcgaccctggcgctttcgtaagcgagagcgataacagcgta
ttcaccgggttgacgagcgcgctggattggagcttcacgacgatcgcgtccgtggatacg
acgaatccggtattggatacgaatacgccgctccaaccggcgaataatgctacggtgggc
ataagcacgggactaaagatgaagttcaacaagccggtcttcgcggcaagcggaacgatc
acggtaacgaatacgaatccgaggcagtcctgggattcgcaagcgattaacgtgaattcg
acgaatgtcagcggcagttcgacgtcaacgattacgatcgtgctgccgaattcgctgcaa
ggcagctcggaatataccgttagcattccgaatggcgcgtttaaagacgcggctggcaat
cctttcatgaatgcgccggcatggacgtttaagacttccgcgccgccgctcgggagcccg
acgctgtcgccgcaggacgatgcgtacggagtcagcgtctcaacgccgctcgtattaagc
tttccagtcaaagtggcgaagaattcagggtatatctggatcaacaaaattgccgacaat
acaagcgtgcagcagattaacgtcgcgagcagcagcgtcgtccttgccaataacgccata
ggcggtacggacgtgacgattacgccaagcacgttggatccgaatacggggttctatgtg
ctgatcgacgcgaacgccttcaaaggcgcgacggatgcgagcctgctctaccaaggcatt
tccgacgcgcggtattggagcttcagcaccaatcccggcaacgatcagacgccgccaacg
ctggtggcggaccaacgtaagccgctcgcgacgcaggcgacgctgacgccggaattggag
ctgaatttctcggagcccgtctatcctggaacagggaatatcacgattcgttcctatcca
tccggttccgtcttcgcagccattcccgtcacatccaccagcgtgactggagggggaacg
accaagatcaaggtagggaacgtgaataaaacgtacaccaacaatacgacgtactatgtc
gagattggcggacaggcgttctccgacgcaagcgggaattattatgccgggatcaccggc
gacagcggatggcggttcacggtaacctccgatacggacaagccgacgctcgtgctgcag
ctgccggcgaatggcgcgacgaacgttcctctgcagggcgccaagctggaggcgacgttc
agcgagccgattatgctcggtaccaatacgtccgcgatcaaactgaaacgaatctccggc
agcacggccagcattgcgacgacgttcgcgatagatccgaccaacaaccgcaagctgctg
attaccgtgaacgggacattgacggcgagcaccgattattatgtcgaaatgggagcgggc
gtcgtaaccgatctcgcggggaatgcgtttgacggcattctcaatcaataccagtggacc
ttccgcacatccagcacgacgtccggcccgccgaaggtttcgaaggccgaactcgtgggc
acgaacaaaatcagaatgacgttcaacgagaacctgaacgagaacgtaacgccgctgccg
gccaacttctacgtgacggtaaacggcgctatgcgggttgtgagcgccgttgcggtgagc
ggacaatacgtcacgctgacgcttcaaagcgatgtcgctgccggacagacggtgaaagtc
tcttattcggccggcacggcgccgatccaagacctctccgggatcgaagccgccaacttc
tcgaacttgaacgtgacgaacgttgcggatacgacggcaccgtaccaagtaagcgggtcg
atcaacggcaatacggtcatccttacgttcagcgaagagctggcctcgatcagcacgtat
gcgtattcccagttttcgttgaacattaacggttcttattcgtccgttacaagcatttcg
ggatcgggcaaccttgtcgtgctgacctatggcgggcaggcggcgacgatcggccaaacc
gtgtcggtttcctattacagctcgtcctcgtacgcgcttaaggatctggcgggcaatgcg
ctggcttcgttcagcgggttctatattcagaacggttatgacgcgaaggcgcctgcgctg
caatcggctacggcatcgggggcgcagattacgctcggttacgatgaggcgctgaatccg
tcgcttattccgccgagaacggcctatgccctgagcgtgaacggcaaaagccgttccgtg
tcgggcgtaagcgtaggcggagcacaggtggtgctgacggtctccccggcgatcgccgtc
ggagattccgtgctgctttcttacaccgtaggatcgcctgccctgtcggatttgggcggc
aatgccgcgcttgcgttcaacggtacggctgtcaacaccggcaccggcggctcgtcggcg
ctggccctgaacggcattatcgcgaagggcgccaatgtgacgctcagcttctcggcggag
ctgaacaccggctatgtgccgacaatctcgcagtttgcggtgaaagtgaacaatgtatcg
cgtccaatattgaacacggcgatcagcggttcggcggtcgtgctgacgctggccacggca
atcaacatcggcgataccgtcaaagtcagctacaccaactcgggttacggaccaagatcg
acaacgggcgcagtaccggcgtcgtttacggatacggcggcagccaaccagacgacttgg
tcggatggcgtgaacagcgagtacgaggcggcggccggcggcggcctgtccatcaagatt
tcggaggccgcgacgacgtccgccgtatcgccggccggcatttcggccaagcaatatgcc
ttgacctcggagaaagtgacgaatgcctataacgcgatacgttcggttagcggcacggct
ccgcgtctcgtcctgacgataccggacacggagaatgcggcgatcgccgcgttcccgctc
ggcgcgctggaggatgcaaagaagcttatgtccaatgcttccatcgtggtggcttataag
gcgatcacgtacgagatcccgctcagcgcgctcaatttcacgcagctggcgcaaatgatg
aatgcgggcagcgcggtcggtcagctggtgatttccatcgatacgaatgcgagctcgctg
gcgtcgtcgctgaatacgcagctgagcgccgcgaaggcgcagacgctcgtcagcccggtc
agcttccaagtctccgtgacgaataacggtctgacgaagccggtggaaacgttgaacggc
tacgtgacgcggacgattacgacgtccgccaacctggatggcaggcaggttgcggtcgtc
tggctggatccgcagtcgggcaagctgtcgtacgtgccgacgaccgtgcagcaggtcaac
aatcagtcggtcgtgacgttcaagcgcaaaggcaatagcgtgtatgccgtcgtgaaaggc
gcgacgagctttaccgacttgaacaaccattgggcgcgcaacgatattctattgctggcc
aataagtacatcgtggaaggcagtacgctgacgacgttcgcgccgaagaaggcgatcacg
cgcggcgagttcgcgatgtttatcgcgaaagggctcggtctgaccggcgaccgcgcggca
gcggcgaagttcaaggacgtgaacacgtccaccagcctggcagcctacatcggcgccgcg
gcgacggcaggcatcgtccaggggatgacggacggctccttcaagccgaacaatccggtc
acaagggaagagatggcgacgatgatggttcgcgcgatcggcgttgcaggcattcaagtg
acgctgcaaggctcggctgccgatacgttgaagaaattcagcgaccggggcaaggttggc
acttgggcgcagacggacgtggccaaagccgttcaagcgggcatcatcaatggccagacg
acgtcgacgttcggcggcaagaacaatgcgacgcgggcggaagcggccgtgatggtgaag
cggctgcttgactacgtgggcttcctggacagctag
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integrated database retrieval system
