Pseudoalteromonas marina: CPA52_13275
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Entry
CPA52_13275 CDS
T06578
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pmaa
Pseudoalteromonas marina
Pathway
pmaa00470
D-Amino acid metabolism
pmaa00550
Peptidoglycan biosynthesis
pmaa01100
Metabolic pathways
pmaa01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pmaa00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CPA52_13275
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CPA52_13275
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CPA52_13275
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmaa01011
]
CPA52_13275
Enzymes [BR:
pmaa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CPA52_13275
Peptidoglycan biosynthesis and degradation proteins [BR:
pmaa01011
]
Precursor biosynthesis
Amino acid ligase
CPA52_13275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_3
ATP-grasp_4
RimK
GARS_A
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
ATG59146
LinkDB
All DBs
Position
complement(2862280..2863200)
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AA seq
306 aa
AA seq
DB search
MTQVNAQFGKVAVMLGGNSAEREVSLKSGQAVFNALQNCGVDAIAFDPQNRSLWELKELN
VDRVFIALHGRGGEDGTVQGALEFMNLPYTGSNVLGSALAMDKIRCKHLFKSAGLSTAPY
AVVDAKKGFDAHAIMAEFKKVMVKPSHEGSSIGMAQATTAQELEDALINAFKFDSQVLVE
QWITGREFTVTVLGDEVQPVIEMTTPNGFYDYQAKYQSNTTQYHCPANLSAHDTQQLQAM
SLEAFDLVGASGWGRVDAMQDEQGNFYLLEVNTVPGMTEKSLVPMAAKANGASFEQLVVR
ILEQTL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagtaaatgcacaatttggtaaagtagcggtaatgcttggtggtaactcagca
gagcgtgaagtgtcattaaagtcgggtcaggctgtttttaatgcattacaaaattgcggt
gtagatgcgattgcattcgatcctcaaaatcggtcattgtgggaactcaaagagttaaat
gtagatcgtgtttttattgcactacatggccgaggtggtgaggacggaactgttcaaggt
gcactagagtttatgaacttaccttacaccggcagtaacgtactgggttcagcgctggca
atggataaaattcgttgtaagcacttgtttaaatcagcaggcttaagcaccgcgccttat
gccgttgtagatgctaaaaaaggttttgatgcacacgctatcatggctgaatttaaaaaa
gtgatggttaagccttctcatgaagggtcgagcattggtatggcacaggcaactactgcg
caagaacttgaagatgcattaatcaatgcatttaagtttgatagccaagtgttggttgag
cagtggataacgggtcgtgaatttacagtgactgttttaggtgatgaagtacagcccgta
attgaaatgacaacgccaaatggcttttacgattatcaggcaaagtatcaatcaaatact
acgcagtatcattgcccagccaatttatcggcgcacgatacgcagcaattacaggctatg
tcgttagaagcgtttgacttagttggcgcaagcggttggggccgcgtagatgcaatgcaa
gatgagcaaggcaacttttatttattagaggttaatactgtacccggaatgacagaaaaa
tcattagtgcctatggcagctaaagcaaatggggcaagttttgagcaattagttgttcgc
attttggagcaaacgctttaa
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