Pseudoalteromonas marina: CPA52_14055
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Entry
CPA52_14055 CDS
T06578
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pmaa
Pseudoalteromonas marina
Pathway
pmaa00521
Streptomycin biosynthesis
pmaa00523
Polyketide sugar unit biosynthesis
pmaa00541
O-Antigen nucleotide sugar biosynthesis
pmaa01100
Metabolic pathways
pmaa01110
Biosynthesis of secondary metabolites
pmaa01250
Biosynthesis of nucleotide sugars
Module
pmaa_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmaa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CPA52_14055 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CPA52_14055 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CPA52_14055 (rfbC)
Enzymes [BR:
pmaa01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CPA52_14055 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ATG59281
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All DBs
Position
complement(3012250..3012816)
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AA seq
188 aa
AA seq
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MKVIDTSIPDVKIIEPTVFGDERGFFMETWSQKKFEELVTGKPTQFVQDNHSKSNKGILR
GLHYQTENTQGKLVRVISGEVFDVAVDIRKGSPTFGKWVGAYLSAENKHQLWIPKGFAHG
FYVTSDKAEFVYKCTDYYNPKAEVSIAWNDNILSIQWPIENKPVLSSKDTNSLSIDEVSS
RGLLTPYC
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaatcgatacaagcatcccagatgtgaaaattatagagcctacagtatttggt
gatgaacgcgggttttttatggaaacctggagccaaaaaaaatttgaagagctagttaca
ggtaaaccaactcaatttgttcaagataatcattctaagtcaaataaagggattttacgt
ggtttacattatcaaactgaaaatactcaagggaaacttgttcgagttatttcaggggag
gtttttgatgtggctgttgatattcgaaaaggctcaccgacttttggaaagtgggttggt
gcatatctatcagctgaaaataagcatcaattatggatacctaaaggttttgctcatggt
ttctatgtgacgagcgataaagctgaatttgtttataaatgtacggattattataacccg
aaagctgaagtatctattgcatggaatgataatatcttgagtattcagtggcctattgaa
aataagcctgtgttatccagtaaggatactaattcattatcaattgatgaagtaagttca
cgtggtctcttgaccccttattgttaa
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