Parus major (Great Tit): 107201779
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Entry
107201779 CDS
T04864
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107201779 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmaj04812
]
107201779 (SPTBN1)
Cytoskeleton proteins [BR:
pmaj04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
107201779 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
107201779 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
SLATT_6
Motif
Other DBs
NCBI-GeneID:
107201779
NCBI-ProteinID:
XP_015477053
Ensembl:
ENSPMJG00000014416
LinkDB
All DBs
Position
3:1304880..1419943
Genome browser
AA seq
2360 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEA
GYKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQ
ILSSDDYGKDLTSVVRLLSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEEHFGSEKIRERI
KDIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYST
QSLVKKHKDVAEEIASYRPTIDSLHEQAKALPQEHAESPDVQGRLSGIEERYKEVAELTR
LRKQALQDTLALYKMFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMN
NQASRVAVVNQIARQLMHSGHPGEKIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLEKIEKEGMQLIAEKPETEAVVKEKLTGLHQMWDELESTTQTKAQRLFDAN
KAELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQ
SQARALSQEGKSTDEVDGKRLTVEKKFLELLEPLNERKANLLASKEIHQFNRDVEDEILW
VGERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITESSPNAE
VIQQRLADLKQLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRQPP
TPEPKVAEDGDSQQQWDGTKGEQVSQNGLPSDQESPRVAETAETNEMVNGAAEQRTSSKE
SSPVPSPTSDRKAKGGVQAQTAATLPAKTQEIPSAQMEGFLHRKHEWETHSKKASSRSWH
NVYCVINNQEMGFYKDSKAAASGIPYHNEIPVSLKDAVCEVAVDYKKKKHVFKLRLTDGN
EYLFQAKDDEEMNTWIQAITSAISSDKIEVSPTTQSTPASSRAQTLPASVTITSESSPGK
REKDKEKDKEKRFSLFGKKK
NT seq
7083 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaacggtagcgacagattacgacaacattgaaatccaacagcagtacagcgat
gtcaacaaccgctgggatgtcgatgactgggacaatgagaacagttctgctcggctgttt
gagcgctcccgcatcaaggccctggctgatgaacgtgaggcagttcagaagaagaccttc
acaaagtgggtgaattcccacttggctcgtgtgtcctgccgaattacagacctgtacact
gaccttcgagatgggaggatgctcatcaaactcctggaagtgctttcaggagagagactt
cctaaaccaactaaaggaaggatgcgcatccattgcctggagaatgtggataaagccctc
cagttcctgaaagagcagcgagtgcacctagaaaacatgggatctcatgatattgtggat
gggaatcacaggctgacacttggtcttatttggacaattatcctgagattccagatccaa
gatatcagcgttgaaactgaggacaacaaagagaagaaatctgctaaagatgctttgctt
ttgtggtgccagatgaaaacagctgggtaccccaatgtcaatatccacaactttacaaca
agctggagggatgggatggcattcaatgcactgatccataagcacaggcctgatctgatt
gactttgacaagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaacctt
gcagagcagcaccttggtcttaccaagctcctggaccctgaggatatcagtgttgaccac
cctgatgaaaagtcaatcatcacctatgtggtgacatactaccactacttctccaagatg
aaagctttggctgtcgaaggaaaacgtatcggaaaggtgcttgacaatgctattgaaaca
gagaaaatgatagaaaaatacgagtccctggcttctgacctgctggagtggattgagcaa
accattatcatcctcaacaatcgcaaatttgccaactccctggttggggtgcagcagcag
ctgcaggcgttcaacacttaccgcacagtggagaaaccacccaaatttacagaaaaagga
aacctggaagtgctgctttttaccatccaaagcaaaatgagagccaacaatcagaaagtg
tacatgccgagggagggcaaactcatctctgacattaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcatcagacaagagaaactg
gaacaacttgcacggagattcgatcgcaaggcagctatgagagaaacttggctgagcgaa
aatcaacgtcttgtttctcaggacaattttggctttgacctcccagcagtggaggctgcc
acgaagaagcacgaggccatcgagacggacatcgccgcctacgaggagcgggtccaggcc
gtggtggcggtggcgaaggagctcgagactgaaaactaccacgacatcaaacgcatcact
gcgaggaaggacaatgttatccgcctgtgggagtatctcctggagctgctccgggcacgg
agacagcggctggagatgaaccttgggctgcagaagattttccaggaaatgctgtacatt
atggactggatggacgagatgaaggtgctcctgctgtcccaagactacggcaagcatttg
ttgggggttgaagacctgctgcagaaacacgctctggtggaagctgacattgctatccag
gctgagagagtgagaggggtcaatgcctctgctcagaagtttgccaccgatggagaagca
ggttacaagccctgtgatccacaggtgatcagggaccgcgtggctcacatggagttctgc
taccaggagctctgccagctcgcggccgagcgccgcgcgcgcctcgaggagtcccggcgc
ctctggaaattcttctgggaaatggccgaagaggaaggctggatcagggagaaggagcag
atcttgtcatctgatgactacgggaaggacctaaccagcgtcgtccgactcttgagtaaa
cacaaggcctttgaggacgagatgagtggccgcagcggccactttcagcaggcgataaaa
gaaggtgaagacatgatcgcggaagagcattttgggtctgagaagatcagagagagaatc
aaagatatccgggagcagtgggctaacctggagcagttatctgccattaggaagaagcgg
ctggaggaagcctctctccttcaccagttccaggccgatgctgatgatattgatgcgtgg
atgttggacatcctcaagattgtctccagcaatgacgttggccacgatgaatattccact
cagtccttggtcaagaaacacaaagacgtggctgaagagattgcgagttaccggccgacc
atcgactctctccacgagcaggccaaggccctgccgcaggagcacgcggagtctccggat
gtgcagggcaggttgtccggaatcgaggagagatacaaagaggttgctgagctgacccgg
ctgcgtaaacaggccctgcaggataccctcgctctctataagatgttcagtgaggcagat
gcttgtgagctttggattgacgaaaaggagaagtggctgaataatatgcagattccagag
aagctggaggacctggaagtgatccagcacaggtttgaaagcttggagccagaaatgaac
aaccaggcgtcccgtgtggccgtggtgaaccagattgccaggcagctgatgcacagtggc
caccctggggagaagatcaaagcacagcaagataaactcaacacaaggtggagccagttc
agagaactggtagataggaagaaggatgctctgctctctgctctgagtatccagaactac
catcttgaatgtaatgaaaccaaatcctggatcagggaaaagaccaaagtgattgaatcc
acacaagacctgggtaacgacctggctggagtgatggccttgcagaggaagctgacgggc
atggaacgggacctggtggccatcgaagccaagctcagtgacctgcaaaaggaggcagag
aagctggaatcagagcatcctgaccaggcacaagccatcctttcacggcttgcagagatc
aatgatgtgtgggaagaaatgaagaccaccctgaagaaccgggaagagtctctgggagag
gccagcaagctgcagcagttcctgagagatctggatgacttccagtcctggctctccaga
acacagactgcaattgcctctgaagatatgcccaacaccctgacagaggctgagaagctg
ctcactcagcacgagaatatcaagaatgaaatcaacaactatgaggaagattatcagaag
atgagggacatgggtgagatggtgacacaagggcaaactgacgctcagtacatgttccta
cgccagcgcctacaggctttggacactggatggaatgagcttcacaaaatgtgggagaac
aggcaaaatctcctttcccagtctcatgcctaccagctgtttctcagagataccaagcaa
gcagaagctttccttaataaccaggagtatgttctggcacacacagagatgccgactacc
ttggaaggagcagaagctgctattaaaaagcaggaggatttcatgaccaccatggatgcc
aatgaagaaaagatcaatgcagttgtggagacaggcaggaggctcgttagtgatgggaac
attaactctgataaaatccaggagaaagtggactctattgatgacagacataggaagaac
cgtgaagcagccagtgaacttctgatgagactgaaagataacagggatctccaaaagttt
cttcaggattgccaagagctctccctctggatcaatgagaagatgctcacagcccaagat
atgtcctatgatgaggcgaggaacctgcacagcaagtggctgaagcatcaggcattcatg
gcagagcttgcatccaacaaagagtggctggagaagattgaaaaagagggaatgcagctc
attgcagagaaaccagagactgaggccgtggtgaaggagaagctgacaggtctccaccaa
atgtgggatgagcttgaatccaccacccagaccaaggctcagcgtctctttgatgcaaac
aaggcagagctttttacccagagctgtgcagacctggataagtggctgaatggtttggag
agccaaatccagtcggatgactacggaaaagatctcaccagtgtcaacatcctgttgaag
aagcagcagatgctggagaatcaaatggatgtccgtaagaaggagatagaggagctgcaa
agccaggcaagggctttgagccaagagggcaagagcacagatgaagtggatggcaaacgc
cttactgtggaaaagaaattcttggagctgctggagcctttgaatgagagaaaggccaac
ctgctggcctccaaagagatccaccagttcaaccgggatgtggaagatgaaattttgtgg
gttggagagaggatgcccatagctacatctactgatcatggacacaacctccagactgtg
cagctactaataaagaaaaatcagacccttcagaaagaaatccagggccaccagcctcgt
atcgatgacattttcgagaggagtcagaacataatcacagagagcagccccaatgctgaa
gtcattcagcagagacttgcagacttgaagcagctgtggaacctcctcatcgaggagaca
gagaagcgccacaagcgcctggaggagtctcacagggctcagcagtattacttcgatgca
gccgaggctgaggcctggatgagtgagcaggagctctacatgatgtcagaagagaaggcc
aaggatgaacagagtgcagtgtccatgctgaagaaacaccagattttggagcaagctgta
gaagactatgctgaaactgtgcaccagctttcaaagaccagcagaactttggtggcagat
aatcacccagaaagcgagcgcatcagcatgcgccagtccaaggtggacaagctctatgcg
ggcctgaaggacctcgctgaggagaggaggggcaagctggacgagaggcaccggctgttc
cagctcaaccgcgaggtggatgacctggagcagtggatcgcagagagggaggtggtggcg
gggtcccacgagctgggccaggactacgaacacgtcacgatgctgcaggagcgcttccgg
gagtttgcccgggacaccgggaacatcgggcaggagcgggtggataccgtcaaccacatg
gccgatgaactcatcaactccggccactcggacgctgccaccatcgccgagtggaaggac
ggactcaatgaggcctgggcggatctcctggagctcattgacacgagaacacaaatcctt
gcagcctcttatgaactgcacaaattttaccacgatgccaaggagatcttaggacgtatc
caagacaaacataagaaactgcccgaggagctcggtagagaccaaaacacagtggaaaca
ctacagagaatgcacacgacgtttgagcacgatatccaggccctgggcacccaggtgcga
cagctgcaggaggatgcagcgcgcctccaggctgcctacgctggggacaaggctgacgac
atccagaagagggaaaacgaggttctagaggcgtggaaggcactgctggatgcctgtgag
ggccgcagggtgaggctggtggacacaggagacaaattccgcttcttcagcatggttcgg
gatctcatgctctggatggaagacgttatccggcagatagaagcccaggaaaagccaagg
gatgtttcatctgtggaactcctcatgaacaatcaccaggggatcaaagcagaaattgat
gcccgaaatgacagcttcactacgtgcattgagcttggcaagtctctgctggccaggaaa
cactatgcatctgaggagatcaaggaaaagctcctgcagttgacggaaaagagaaaagaa
atgattgacaaatgggaagacagatgggagtggctgagactgattttggaggtgcaccag
ttctccagagatgcaagtgtggctgaggcctggctgctgggacaggagccctacctgtcc
agccgtgaaatagggcagagcgttgatgaggtggaaaaattaatcaagcggcatgaagcg
tttgagaaatccgcagctacctgggacgagaggtttgcagcgctggagagactgaccacg
ctggaactgctggaagtgcgtcggcagcaagaggaggaggagcggaagaggcagccgccc
actccagagcccaaggttgcagaggatggagactcccagcagcaatgggatgggacaaaa
ggagaacaagtttcccaaaacggtttgccctcagaccaggaatctccacgggtggcagaa
actgcagaaaccaacgaaatggtcaatggggctgcagaacagaggacgagttccaaagag
tccagtcccgttccttccccgacgtcagaccgcaaagccaagggcggcgttcaggcgcag
actgctgctaccctcccagccaaaacccaggagatcccctcagcccagatggagggcttc
ttacaccgcaagcacgagtgggagacacacagcaagaaagcctccagcaggtcatggcat
aacgtgtactgtgtcataaacaaccaagagatgggcttctacaaggactcgaaagctgct
gcttctggcatcccttaccacaacgagatccctgtcagcttgaaggacgcagtctgcgaa
gtagcggtcgattacaaaaagaagaagcatgtgttcaagctcagattgaccgatggcaac
gaatacctcttccaagccaaagacgatgaggagatgaacacgtggattcaggccatcaca
tcagcgatttcttcggacaaaatcgaagtgtccccgaccacccagagcactccagcctcc
agccgtgcccagaccctgcctgccagcgtcacaataaccagcgagtccagccctggcaag
cgggagaaagacaaagagaaagacaaagagaaaagattcagcctttttggtaaaaagaag
tga
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integrated database retrieval system
