Parus major (Great Tit): 107202061
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Entry
107202061 CDS
T04864
Symbol
LRCH1
Name
(RefSeq) leucine-rich repeat and calponin homology domain-containing protein 1 isoform X1
Organism
pmaj
Parus major (Great Tit)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
CH
CAMSAP_CH
T3SS_SCTL
Motif
Other DBs
NCBI-GeneID:
107202061
NCBI-ProteinID:
XP_015477813
Ensembl:
ENSPMJG00000014912
LinkDB
All DBs
Position
1:60765769..60877277
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AA seq
730 aa
AA seq
DB search
MATLGGESQPFPSAALAAAAGVGGGGGGSGALGLQAPLNRGLERALEEAAHSGGLNLSGR
KLKEFPRSAAALSHDLSDTVRADLSKNRLTEVPTELCHFVSLETLNLYHNCIKVIPDAIV
NLQMLTYLNLSRNQLSSLPACLCGLPLKVLIASNNKLGSLPEEIGQLKQLMELDVSCNEI
TALPQQIGQLKSLRELNVRRNYLEVLPQELVQLPLVKFDFSCNKVLVIPICFRKMVQLQV
LLLENNPLQSPPAQICTKGKVHIFKYLTVQACQIKTADSLYLNAIEPQHLPQPVEESIDD
IYPSKKDSDSGVGSDNGDKRLSATEPSDEDTISFNVPMSDIVEEDHIIKDDSGHHANSRK
VEFHQGSSRTFVNDKSRETGNQFDESDTLTSEFMNYIKSRAAECDELLRIEEDTQWQADE
IISLSEEQTIDIAMIEQLREAVDLLQDSNSGQMQMDMASFGQTEELFTLQRENAEEELEF
QRRRELIMEKVKPEARTCEQGEKWSLSQNDLIVWNSSGQTSHNENKDKSPIMSPTTNTTI
PFGLKPRSADPSLSFPPISFNTLTQAQTWDNFSYSIPSEGDSDNVFLRPQRNLESIDPQF
TIRRKMEQMREERELVEQLRENIETRLKICLPEDLGSALMDGVVLCHLVNHVRPRSVGSI
HVPSPAVPKLSMAKCRRNVENFLDACRKLGIPEEKLCLPHHILEEKGLVKVSITVQALLD
VTTVKQALFT
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgctgggaggcgagtcgcagcccttcccctctgctgctctggcggcggcggcc
ggggtgggcggcggcggcggcggcagcggggcgctgggtctgcaggcgccgctgaaccgc
ggtctggagcgggcgctggaggaggcggcgcactccggggggctcaacctgagcggcagg
aagctgaaggagttcccgcgcagcgccgccgccctcagccacgacctctccgacacggtg
cgggcagatttatccaagaataggttaactgaagttcctacggagttgtgccattttgtc
tctctggaaacactaaatctataccacaattgtatcaaagttataccagatgccatagta
aacttgcaaatgctaacttacttaaatttgagtcgaaatcagctttcttctttgccagct
tgcctgtgtggtcttcctctaaaagtcttaattgcaagtaacaataagctaggttccctt
ccagaagagataggtcagctaaaacagttaatggaattggatgtcagctgtaatgaaatc
acagctttaccacagcaaataggccagttgaaatccttaagagaactgaatgtcagaaga
aattacctcgaagttttaccccaagaactagtacagcttcccttggtaaagtttgacttt
tcctgcaataaagtgcttgtgattccaatttgttttagaaagatggtgcagttacaagta
ttactgcttgagaataatcctttacaatctccaccagcacaaatttgtacaaagggtaag
gtgcatatattcaaatatctgactgtacaagcctgtcagattaaaacagcagactcgctg
tatcttaatgccatagaaccacagcatttgccacaacctgtggaagagagcattgatgac
atctacccaagtaaaaaagactcagattcaggtgttggtagtgacaatggtgataaacgt
ttgtcagcaacagagccatctgatgaagatactatcagctttaatgttccgatgtcagac
attgtggaagaagatcatattataaaggatgattcaggtcaccatgctaactcaagaaaa
gtggaattccatcaaggatcttcacgtacgtttgtcaatgataagtcacgagaaacagga
aaccagtttgatgaatcggatactcttacttcggagtttatgaactacattaagagcaga
gcagcagagtgtgatgaattattgagaatagaagaggacacgcaatggcaagcagacgaa
ataataagtttatcagaagaacaaactattgatatagcaatgatagaacaactaagagaa
gcagtagatttattacaagattccaacagtggtcaaatgcagatggacatggcttctttt
ggtcagacagaagagttatttaccttacagagagaaaatgctgaagaggaactggaattc
cagaggaggagggagttgattatggagaaagtaaagcctgaagcgagaacatgtgaacag
ggtgaaaaatggtcactgagccagaatgatctaattgtttggaactcaagtgggcaaacc
tctcacaatgagaataaggataaaagcccaataatgtctcctactacgaacaccacaatc
ccttttgggctgaagccacgatcagcagatccatccctcagttttcctcctatctccttc
aacacacttacacaggcacaaacatgggacaactttagctacagtatcccatctgaagga
gacagtgacaatgtgttcttaagaccacaaagaaatttggaatcaatagatccacagttc
acaattcgaaggaaaatggagcagatgagagaagagagagagcttgtggagcagctacgt
gagaacatagaaacaagactaaagatttgtttgccagaagacctgggctcagctctgatg
gatggtgtcgttctgtgccatttagtaaatcacgttcgccctcggtctgtcgggagtatt
catgtaccctcaccagcagtacctaaacttagcatggccaaatgcaggagaaacgtggaa
aactttttggatgcatgtagaaaactggggataccagaggagaagctctgcctaccacat
cacatcctagaagaaaagggcttggtaaaagtgagcataacagttcaagcattgctagat
gtaaccacagtgaaacaagctttattcacatga
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