Parus major (Great Tit): 107214056
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Entry
107214056 CDS
T04864
Symbol
KDM1A
Name
(RefSeq) lysine-specific histone demethylase 1A
KO
K11450
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase [EC:
1.14.99.66
]
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107214056 (KDM1A)
Enzymes [BR:
pmaj01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.99 Miscellaneous
1.14.99.66 [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase
107214056 (KDM1A)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
107214056 (KDM1A)
REST complex
107214056 (KDM1A)
Histone demethylases
107214056 (KDM1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
SWIRM
NAD_binding_8
DAO
Pyr_redox_2
AlaDh_PNT_C
Pyr_redox
FAD_binding_2
HI0933_like
FAD_binding_3
FAD_oxidored
Thi4
Pyr_redox_3
2-Hacid_dh_C
DUF6827
Sec10_N
MurD-like_N
GIDA
Lycopene_cycl
IlvN
Motif
Other DBs
NCBI-GeneID:
107214056
NCBI-ProteinID:
XP_015504549
Ensembl:
ENSPMJG00000006928
LinkDB
All DBs
Position
23:4372885..4402960
Genome browser
AA seq
815 aa
AA seq
DB search
SDSGGASERTPRKKEPPRASPPGGVSEPSAVGAAPAPGAETTGIAETPEGRRTSRRKRAK
VEYREMDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPPAPAEEENESEPEEPSGQAGG
LQDDSSGGYGDGQASGVEGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQKVFLYIRNRT
LQLWLDNPKIQLTFEATIQQLEAPYNSDTVLVHRVHSYLERHGLINFGIYKRVKPLPTKK
TGKVIIIGSGVSGLAAARQLQSFGMDVTVLEARDRVGGRVATFRKGNYVADLGAMVVTGL
GGNPMAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLD
FNVLNNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKDLLNKMVNLKEKIKE
LHQQYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPS
DVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVA
LAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAV
QFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNL
YKAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWA
RGSYSYVAAGSSGNDYDLMAQPITPGPAIPGAPQPIPRLFFAGEHTIRNYPATVHGALLS
GLREAGRIADQFLGAMYTLPRQPTPGVPPQQAASL
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
tcggatagcggcggggcttcggaacgcacgccccgcaagaaggagccgccgcgggcctcg
cctccgggcggtgtgtccgagccgtcggccgtcggggccgcccctgcgcccggcgccgaa
accaccggcatcgccgagacccccgagggccgcaggaccagccgccgcaagcgagccaaa
gtcgagtatagagagatggatgagagtcttgcaaacctgtcagaagatgagtattactct
gaagaagagagaaatgctaaagctgagaaagagaaaaaactacccccaccacctccacca
gctcctgcagaagaagagaatgaaagtgagccagaggagccgtctgggcaagcaggagga
cttcaagacgacagttctggagggtatggagacggccaagcatcaggtgtggagggtgca
gctttccagagtagacttccacatgaccgtatgacatctcaagaagctgcctgcttccct
gatataatcagtgggccacagcagactcagaaggtgtttctgtacatcaggaaccgcacc
ctgcagctctggttggataacccaaagattcagctgacatttgaagcaactatccaacag
ttagaagcaccttataatagtgacacagtgctcgttcacagggttcacagctacctggag
cgtcatgggctgattaactttgggatctacaaaagagtgaagccccttccaaccaagaag
acaggaaaggtgatcattattggttctggagtctctgggttggcagcagctcgccagttg
cagagttttggaatggatgtcacagttctggaagccagagacagagtaggaggacgagtt
gccacctttcgcaaagggaattatgttgctgatctgggagcaatggtggtaacaggactg
ggaggaaatcccatggctgtggtcagcaaacaagtaaatatggaactggcaaagatcaaa
caaaaatgtccactttatgaagcgaatggacaagctgttcccaaagagaaagatgaaatg
gtggagcaagaatttaatcgtctgctagaagccacatcctatctcagtcatcagctggat
tttaatgttctcaataataagcctgtctccctaggccaggctctggaggttgtcatacaa
ttgcaggagaagcatgtgaaggatgagcagattgagcactggaaaaaaattgtgaaaaca
caggaggaattgaaagatcttcttaacaagatggtgaatttaaaagagaagattaaagaa
cttcatcagcagtataaggaagcatcagaagtgaagccacctcgggatattacagcagag
ttccttgtgaaaagcaagcacagagatctgactgcactttgcaaggagtatgatgaattg
gcagaaacacaagggaagctggaagagaaattacaagaacttgaagccaatccaccaagt
gatgtttatttgtcatccagagacaggcaaatacttgactggcattttgcaaatctagaa
tttgctaatgctacacctctttctacactttcactgaagcactgggaccaggatgatgac
tttgaattcacaggcagtcacttgactgtgaggaatggatattcctgtgtgccagtggcc
ttagcagaagggttggatattaaattaaacacggcagttcgacaggttcgctacacagca
tcaggctgtgaagtgatagctgtaaatacccgatctaccagccagaccttcatttataag
tgtgatgctgtgctgtgcactctgcccctgggagtgctgaaacagcagcctccagcagtt
cagtttgtgccacctcttcctgaatggaaaacttctgcagtgcagaggatgggatttggc
aacctgaacaaggttgtgctgtgttttgatcgtgtcttctgggatccaagtgtcaatttg
tttggccatgttgggagcactactgcaagcagaggagagcttttcctcttttggaacctg
tacaaagcaccgattttgttggccttggtagcaggagaagcagcagggatcatggagaat
atcagtgatgatgtcattgttggtcggtgccttgccattctcaaaggcatctttggcagc
agcgctgtgccccagcctaaagagacggtggtgtcccgctggcgtgctgacccgtgggcc
cgggggtcctactcctacgtagctgctggatcctctggaaatgactatgatttgatggct
cagccaattactccagggccagccattccaggtgctccacagcccatccctcgcctgttc
ttcgcgggtgaacacaccatccgcaactaccccgccacggtgcacggcgcgctgctcagc
gggctgcgggaggccggccgcatcgccgaccagttcctgggggccatgtacaccctgccc
cggcagcccacgcccggtgtgcctccccagcaggctgccagcctgtga
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