Pseudomonas marincola: PMYSY11_2495
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Entry
PMYSY11_2495 CDS
T07318
Symbol
ldcA
Name
(GenBank) Lysine decarboxylase LdcA
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
pmao
Pseudomonas marincola
Pathway
pmao00330
Arginine and proline metabolism
pmao01100
Metabolic pathways
pmao01110
Biosynthesis of secondary metabolites
Module
pmao_M00133
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:
pmao00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
PMYSY11_2495 (ldcA)
Enzymes [BR:
pmao01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
PMYSY11_2495 (ldcA)
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Colicin-DNase
Motif
Other DBs
NCBI-ProteinID:
CAE6921650
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All DBs
Position
PMYSY11:complement(2599413..2601668)
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AA seq
751 aa
AA seq
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MYKDLKFPVLIVHRDIKADTVAGDRVRAIAHELEQEGFSIISSANSAEARIVASTHHGLA
CILMTAEGAGENQHLLQDMVELIRIARVRAPQVPIFALGEQVTIENAPAEAMADLNQLRG
ILYLFEDTVSFLARQVARAARNYLDGLLPPFFRALVQHTAQSNYSWHTPGHGGGVAYRKS
PVGQAFHQFFGENTLRSDLSVSVPELGSLLDHTGPLAEAEARAARNFGADHTYFVINGTS
TANKIVWHSMVGRDDLVLVDRNCHKSILHSIIMTGAIPLYLCPERNELGIIGPIPLSEFS
RESIQAKIDASPLARGRAPKVKLAVVTNSTYDGLCYNAELIKQTLGDSVEVLHFDEAWYA
YAAFHEFYSGRYGMGTSREANTPLVFSTHSTHKLLAAFSQASMIHVQDGGARQLDTDRFN
EAFMMHISTSPQYGIIASLDVASAMMEGPAGRSLIQETFDEALSFRRALANLHKHLAADD
WWFSIWQPPQNHGVTDVATQDWLLQPQADWHGFGDIAEDYVLLDPIKVTLVMPGLTAGGK
LDEFGIPAAVVSKFLWERGLVVEKTGLYSFLVLFSMGITKGKWSTLLTELLEFKRCYDTN
MPLIEALPSIAREGAGRYQGMGLRDLCDQLHQCYRENATAKALKRMYTTLPDVAMKPADA
YNELVRGEVEAVPVAELEGRIAAVMLVPYPPGIPLIMPGERFTAETRSIIDYLEFARNFD
SSFPGFDADVHGLQIQQTEQGKSYTVDCIKQ
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtataaagatctaaagtttcctgtcttgatcgtgcaccgcgacatcaaagccgacacg
gtggcaggtgaccgcgtgcgggccattgctcatgagcttgagcaagaaggcttcagcatt
atcagcagcgccaactctgccgaggcgcgcatcgttgcatccacccaccacggcctggcg
tgtatcttgatgaccgccgaaggcgccggtgaaaaccagcatctgttgcaagacatggtc
gagttgatccgcatcgcacgggtgcgtgcgccgcaagtgccgattttcgccctgggtgaa
caggtgaccatcgagaatgctccggctgaggcgatggctgacctcaatcagttgcgcggc
attctctatctgttcgaagacaccgtctcgttcctcgcccgccaggttgcccgcgccgcc
cgcaattatctcgatggcttgctgccgccgttcttccgcgctctggtgcaacataccgcg
caatccaattattcctggcacacgcctggccatggtggcggggtggcctaccggaaaagt
ccggtggggcaggcgttccaccagttctttggcgaaaacaccctgcgttcggacttgtcg
gtttcggtgcctgaactcggctcgctgctcgatcacaccggcccgttggcggaagctgag
gcgcgtgcggcgcgcaactttggcgccgatcacacctatttcgttattaacggcacctcg
accgccaacaagatcgtctggcacagcatggtcggacgtgatgatctggtgctggtcgat
cgcaattgccacaagtcgattctgcactcgatcatcatgactggcgcgattccgctgtac
ctgtgcccggaacgcaatgagctggggattatcgggccgattccgctcagcgagttcagc
cgcgagtcgatccaggccaagattgatgccagcccgctggcgcgcggtcgcgcgcccaag
gtgaaactggcggtggtgaccaactcgacctatgacggcctttgctacaacgccgaactc
atcaagcaaaccctgggcgatagcgtcgaggtgctgcatttcgatgaggcgtggtacgcc
tacgccgcgtttcatgagttctacagcgggcgctacggcatgggcacctcgcgtgaggcc
aatacgccgctggtgttcagcacccactccacgcacaagctgttggctgcattcagccag
gcctcgatgattcatgttcaggatggcggcgcgcgtcagctggataccgaccgcttcaac
gaagccttcatgatgcacatttcgacttcgccgcagtacggcattatcgcctcactcgat
gtggcctcggcgatgatggaagggccggccggtcgctcactgattcaggaaaccttcgat
gaagccctgagctttcgccgggcgctggccaacctgcacaagcatctggcagcggatgac
tggtggttcagtatctggcagccgccgcagaatcatggcgtcaccgatgtcgccacgcag
gactggctgctgcaaccgcaagccgactggcatggctttggcgacattgccgaagactat
gtgttgctcgatccgatcaaggtcacgctggttatgcccggcctcactgcaggtggcaag
ctcgatgaattcggcattccggcggcggtggtcagcaagttcctctgggagcgcgggctg
gtcgttgagaagaccggcctgtactcgtttctggtgctgttctcgatgggtatcaccaag
ggcaagtggagcacgttgctcaccgagttgctggagttcaaacgctgttacgacaccaat
atgccgctgatcgaagcattgccgtcgattgcccgcgagggtgccgggcgttatcagggc
atgggcttgcgtgatctgtgcgatcagctgcatcagtgctatcgcgagaacgccacggcg
aaagcgctcaaacgcatgtacaccacacttccggatgtcgccatgaaaccggccgatgcg
tataacgaattggttcgcggggaagtggaggcggtaccggttgctgagctggaagggcgc
atcgctgcggtgatgctggtgccatatccgccaggtattccgctgatcatgcccggtgag
cgtttcactgccgagacccgctcgataattgattatcttgagttcgcgcgaaacttcgac
agcagtttcccaggcttcgatgccgatgtgcacggtttgcagatccagcaaacagaacag
ggcaagagctacaccgtggattgcatcaaacagtag
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