Pecten maximus (king scallop): 117339145
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Entry
117339145 CDS
T07399
Name
(RefSeq) THO complex subunit 3-like
KO
K12880
THO complex subunit 3
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03013
Nucleocytoplasmic transport
pmax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117339145
09122 Translation
03013 Nucleocytoplasmic transport
117339145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117339145
03041 Spliceosome [BR:
pmax03041
]
117339145
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
117339145
Spliceosome [BR:
pmax03041
]
Complex C
Other components
EJC/TREX
117339145
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
117339145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
NBCH_WD40
RMC1_N
IKI3
PROPPIN
Coatomer_WDAD
Nup160
PD40
WD40_like
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
117339145
NCBI-ProteinID:
XP_033756455
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All DBs
Position
12:8662851..8668116
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AA seq
319 aa
AA seq
DB search
MATYLENTRKHFQNNNRVRESQAHSAKVHSVAWNCDGRRLASGSFDKTVSVFMLERDRLV
KDLTFRGHGDSVDQLCWHPKHPDHLVTASGDKTVRIWDARTNKSVATVNTKGENINICWS
PDGSTIAVGNKDDLITFIDIRSHRSRAEEQFKFEVNEISWNNEGDLFFLTSGQGSIHILS
YPELKLQYSLTAHPANCICIEFDPVGKYFATGSADALVSLWDTNELVCVRTFSRLDWPVR
TLSFSHDGCLLASASEDLVIDIAEVESGEKVTEIACESPTFTVAWHPKRYLLAFACDDKY
EGHRDERGSVKVFGIPSDP
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttacttggaaaacacgcgaaaacattttcaaaataacaaccgagtaagagaa
tctcaggcccactcagcaaaggttcactcagtagcgtggaactgtgatgggagacgtcta
gcctctggatcattcgacaaaactgtcagcgtgtttatgttggagcgggatcgactggtg
aaagacttgacgtttcgtggccatggtgacagtgttgatcagttgtgttggcaccccaaa
cacccggaccacctcgtcaccgcaagtggcgacaaaactgtcagaatctgggacgccagg
accaacaaatccgtagcaacagtcaacaccaaaggagaaaacatcaacatctgttggtca
cccgatgggagtacaatagctgtaggcaacaaagatgatctcatcacatttattgatatc
agaagtcataggtccagagcagaggagcagttcaaatttgaggttaacgagatttcatgg
aataacgaaggagatctattcttcctgaccagtggtcaaggcagtatacacatcttaagt
taccctgagttaaagctgcagtactcgttaacggctcaccctgccaactgtatttgtata
gagtttgaccccgtggggaaatacttcgccacaggaagtgctgatgccctcgtcagtctc
tgggacacgaatgagctggtgtgtgtacgcacattctcaagattggattggccggttagg
actctaagtttcagccatgatggctgtctgctggcttcagcttctgaagatctggttata
gatattgccgaggtggaaagtggtgagaaggttacagagattgcgtgcgaatcccccacg
ttcaccgttgcctggcatccaaaacgttacctgctggcgttcgcctgcgacgacaagtat
gaaggacatcgtgacgaaagaggcagtgtcaaagtgttcggtattccctctgacccttga
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