KEGG   Pecten maximus (king scallop): 117339145
Entry
117339145         CDS       T07399                                 
Name
(RefSeq) THO complex subunit 3-like
  KO
K12880  THO complex subunit 3
Organism
pmax  Pecten maximus (king scallop)
Pathway
pmax03013  Nucleocytoplasmic transport
pmax03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmax00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117339145
  09122 Translation
   03013 Nucleocytoplasmic transport
    117339145
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmax03019]
    117339145
   03041 Spliceosome [BR:pmax03041]
    117339145
Messenger RNA biogenesis [BR:pmax03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     117339145
Spliceosome [BR:pmax03041]
 Complex C
  Other components
   EJC/TREX
    117339145
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    117339145
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 eIF2A NBCH_WD40 RMC1_N IKI3 PROPPIN Coatomer_WDAD Nup160 PD40 WD40_like Cytochrom_D1
Other DBs
NCBI-GeneID: 117339145
NCBI-ProteinID: XP_033756455
LinkDB
Position
12:8662851..8668116
AA seq 319 aa
MATYLENTRKHFQNNNRVRESQAHSAKVHSVAWNCDGRRLASGSFDKTVSVFMLERDRLV
KDLTFRGHGDSVDQLCWHPKHPDHLVTASGDKTVRIWDARTNKSVATVNTKGENINICWS
PDGSTIAVGNKDDLITFIDIRSHRSRAEEQFKFEVNEISWNNEGDLFFLTSGQGSIHILS
YPELKLQYSLTAHPANCICIEFDPVGKYFATGSADALVSLWDTNELVCVRTFSRLDWPVR
TLSFSHDGCLLASASEDLVIDIAEVESGEKVTEIACESPTFTVAWHPKRYLLAFACDDKY
EGHRDERGSVKVFGIPSDP
NT seq 960 nt   +upstreamnt  +downstreamnt
atggcgacttacttggaaaacacgcgaaaacattttcaaaataacaaccgagtaagagaa
tctcaggcccactcagcaaaggttcactcagtagcgtggaactgtgatgggagacgtcta
gcctctggatcattcgacaaaactgtcagcgtgtttatgttggagcgggatcgactggtg
aaagacttgacgtttcgtggccatggtgacagtgttgatcagttgtgttggcaccccaaa
cacccggaccacctcgtcaccgcaagtggcgacaaaactgtcagaatctgggacgccagg
accaacaaatccgtagcaacagtcaacaccaaaggagaaaacatcaacatctgttggtca
cccgatgggagtacaatagctgtaggcaacaaagatgatctcatcacatttattgatatc
agaagtcataggtccagagcagaggagcagttcaaatttgaggttaacgagatttcatgg
aataacgaaggagatctattcttcctgaccagtggtcaaggcagtatacacatcttaagt
taccctgagttaaagctgcagtactcgttaacggctcaccctgccaactgtatttgtata
gagtttgaccccgtggggaaatacttcgccacaggaagtgctgatgccctcgtcagtctc
tgggacacgaatgagctggtgtgtgtacgcacattctcaagattggattggccggttagg
actctaagtttcagccatgatggctgtctgctggcttcagcttctgaagatctggttata
gatattgccgaggtggaaagtggtgagaaggttacagagattgcgtgcgaatcccccacg
ttcaccgttgcctggcatccaaaacgttacctgctggcgttcgcctgcgacgacaagtat
gaaggacatcgtgacgaaagaggcagtgtcaaagtgttcggtattccctctgacccttga

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