Prochlorococcus marinus NATL1A: NATL1_03831
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Entry
NATL1_03831 CDS
T00467
Symbol
uvrD
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pme
Prochlorococcus marinus NATL1A
Pathway
pme03420
Nucleotide excision repair
pme03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NATL1_03831 (uvrD)
03430 Mismatch repair
NATL1_03831 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pme03400
]
NATL1_03831 (uvrD)
Enzymes [BR:
pme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NATL1_03831 (uvrD)
DNA repair and recombination proteins [BR:
pme03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NATL1_03831 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NATL1_03831 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABM74947
CyanoBase:
NATL1_03831
UniProt:
A2C0D7
LinkDB
All DBs
Position
complement(354120..356537)
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AA seq
805 aa
AA seq
DB search
MKQSNSIFLNGLNEAQSHAVDHFHGPLLVVAGAGSGKTRALTHRIAHLITEYKVDPSSIL
AVTFTNKAAREMKDRLELLLAKRLSSLTHGKPWTALQVAEQREIRNRIHREISRELWIGT
FHALFSRLLRFDIDKFKDPEGLTWTKQFSIYDETDAQSLIKEIVTQDLQLDPKRFEPKKV
RWAISNAKNQCLLPDDLSNNQEGQRGKLVAETYRLYRKALAANNALDFDDLLLIPVQLLQ
QNEKIRTYWHSRFKHVLVDEYQDTNWTQYELIKQLVTNGKDPSSFQDWNNRSVFVVGDAD
QSIYSFRAADFRILMGFQEDFGKKSLDNTYDSTLVKLEENYRSTSTILEAANSLISNNKE
RIDKVLRATRGEGEPIRLTRCDDEIAEAEAVIHRLRILDASNPELNWGDMAILYRTNAQS
RAIEDSLVRWSIPYIVVGGLRFYDRREIKDLLAYLRLLINPSDSVSLLRVLNVPKRGIGK
TTVQRLSDAASQLKIPLWEVVNDPEAVRSLAGRSAKGLLIFSELINELQSHLLSSSPAEL
VQLVLEKSGYLSELIATGTDEAEERRRNLQELVNAALQYQEESEDANLEGFLSTAALSSD
ADNKDTASNRVTLMTLHSSKGLEFPVVCLVGMEQGLFPSYRSLDDPSSLEEERRLCYVGL
TRAKEKLFLFHASERRMWGGMREPAIASIFLSEIPEELVKGDIPLSGGATLRREKNLDRL
TRIDRQSNKKSFPREAENAVRKTYSGPSPGKRWSVNDRVEHSSFGEGIITHVFGSGEKIS
LAIKFSGMGPKILDPRLAPLKLIDE
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaatcaaacagtatatttctaaatggattaaacgaggcgcagtcacatgcagtt
gatcattttcatggtccattattagttgtagcaggagcaggaagcggaaaaacaagagct
cttactcatcgtattgcgcatttaattactgaatacaaagttgatcctagttctattctt
gcagttacttttaccaataaagctgcaagagagatgaaagatagacttgaattgctttta
gcaaaaaggttatcaagtcttacccacgggaagccttggactgccttgcaagtagcagaa
caaagagaaattcgtaatcgtatacatcgtgaaatcagtcgtgaattatggataggtact
tttcacgctttgttttcgagattattacgctttgacatcgataaattcaaagaccctgaa
ggattgacatggactaaacagttttcaatatatgacgaaacagatgcccaaagtcttatc
aaagaaatagttacacaagatctacaattagatccaaaaagatttgaaccaaaaaaagta
cgatgggcaatcagtaatgccaaaaatcaatgcttacttcctgatgatttatcaaataat
caagaaggtcaaagaggaaaattagttgctgaaacttatagactttatagaaaagcttta
gctgctaataatgcattagattttgatgatcttctattaatacctgttcaattactacaa
caaaatgaaaaaataaggacttattggcacagtcgcttcaaacatgttttagttgatgaa
tatcaagatactaattggacacaatacgaattaattaaacaattggttaccaatggtaaa
gatccatcttcttttcaagattggaataatcgatcagtttttgttgttggcgatgcagat
caaagtatttacagctttagagctgcggactttaggatactaatgggatttcaagaggac
tttggaaagaaaagcctagacaatacatatgattcaactcttgtaaaactagaagaaaat
tatcgatctacctctaccatcctcgaagcagcaaattcactaatctccaacaataaagaa
agaatagataaagttcttagagcaactagaggagaaggtgagcctattagattaacaagg
tgtgacgatgagatagcagaggcagaggcagttattcataggctaagaattttagatgcc
tcgaatccagaattaaattggggagatatggctattctttatagaaccaatgcgcaatca
agagcaattgaggactcattggtccgctggagtattccatacattgtggttggaggatta
cgtttttatgatcgaagagaaattaaagatctactagcttatttaagacttttaattaat
ccatctgacagtgtcagtcttctgagagttttaaacgttcctaaaagagggattggaaaa
acaacagttcaaagattgagtgatgcagctagtcaattaaaaattcctctttgggaagtt
gtaaatgaccccgaagctgtcagatcactcgcaggaagatcagccaaaggtcttttaatt
tttagtgagcttattaatgaattacaaagtcatcttctctcttcaagccccgccgagttg
gttcaattagttttagaaaaaagtggctatttaagtgaattaattgcaacaggaacagat
gaggcagaagaaagaagacgcaatcttcaagaattagttaatgccgcgttgcaatatcag
gaagaaagcgaagatgcaaatttagaaggttttttatcaactgctgctctatcaagcgat
gcagataataaagacactgcgtcaaatcgagtcacattaatgactcttcacagcagtaaa
ggtttggaatttcctgtcgtttgtcttgtgggaatggagcaaggcttattcccaagctat
agatcacttgatgatccatcttcacttgaggaagaaaggcgactttgttacgtaggactt
actagagcaaaagaaaaactatttctctttcatgcatctgagagaagaatgtggggaggg
atgagagaaccagctatcgcatctatattcctctccgaaataccagaagaacttgttaaa
ggcgatatcccattatctggtggggctacattaagaagagaaaaaaatctagacagacta
actagaattgatcgccaaagtaataaaaagtcctttcctcgtgaagctgaaaatgcagta
agaaaaacatattctggtccttccccagggaagcgatggtcagttaacgatagagttgaa
cattcttcatttggagaagggataatcacacatgtttttggttcaggagaaaaaatctca
ctggccataaaattctcaggaatggggccaaaaatattagacccaagactagctccattg
aaattgatagatgagtaa
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