Prochlorococcus marinus NATL1A: NATL1_14771
Help
Entry
NATL1_14771 CDS
T00467
Symbol
recB
Name
(GenBank) possible UvrD/REP helicase subunit B
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pme
Prochlorococcus marinus NATL1A
Pathway
pme03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NATL1_14771 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pme03400
]
NATL1_14771 (recB)
Enzymes [BR:
pme01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NATL1_14771 (recB)
DNA repair and recombination proteins [BR:
pme03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NATL1_14771 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
AAA_30
Viral_helicase1
DEAD
Motif
Other DBs
NCBI-ProteinID:
ABM76034
CyanoBase:
NATL1_14771
UniProt:
A2C3H4
LinkDB
All DBs
Position
1184128..1187913
Genome browser
AA seq
1261 aa
AA seq
DB search
MTNIELFQPNKYPLSNGIRLIEASAGTGKTFSLSHLVLRLLTEKEYSINEILVVSFTEAT
ASEIKARIIERLILALKIIESINTTVKPHKIDNVLNEWVDLNITSKERALYIASLLLEAL
ERIDNADITTIHGFCSKTLRRESIENGNNLNPSIEKDSNSLINEIVEEYWKKEILEIEIS
ELKGLFKSNFNRKNLIEVLSSLDNDPNNSFKQTFNDLKIEESLSNQLNNYSESLWIKFTT
LWEEKGQELEDSFREIAKDLRSQGIKDTKPYSSKPRKNRYELLSNWIEKYKEKKRPSYED
IQNQNLINEYFHPKNIYQLDMKHKIDSCSKEMEPILDIIGDLYDSPGEFVWEHALLWTKR
ELEKRKSKKGLINYSDLLKLLDPKNQNRNAIKDEVNHNNIYKNLEQRYKVALIDEFQDTD
PVQLRLLKKAFGNRSSHLLLMIGDPKQAIYSFRGGSLNTYMKAREACDQIHLMNANYRST
KSLILTLNKLFLDGLIRSNLSTQELNPCSQEDLLELNGIKEPFKVLNLIVTNQKEKAQRI
KLDSKSKIEDKIPKVIGSYLLELLSNNPKDLNPSDICILVNRHDQAKNIHSYLSKIRIPS
QLLSNENIFTREGAQILQIFINCIVSPHNQQKLALLACSELMQWKKEKLIKSKIDGDFDS
LSSKFYELSKLFPTIGLLGCLSNFLEGKSIADLSNRGTLLGDLYQSSQLVDEQIHRQKFN
ALRASQWLSSKRFQSIEQIPEEYQPNSAISNSSVNIITIHKSKGLQFKIVICPYLWQKPP
DRKSHLWKDNQNLLISKKYKWNKKYSSYQDFIRKESLNEAERLAYVAFTRAKKQLIVLWA
NAAGQEGNPLSGFLFGSESINLKIEDHTKEMMENSFTKRELNVDIQDVKIIETNTTWSQP
KSEVKLSLGAIPTHQFENSWGRYSFSKWITHKNDELILKDLSDELNEDHEFKGEIEDISF
QEIDHLLVEKDKSIDRSEDQTWSKESPIGEFPKGPIAGTCLHKILERIDFNDIENQLKIS
TIIEEELNIVNISNSFIKPINILLKRIANIPLGGPLGKFKMKNLNTKSSIKELKFDIPIC
HEANPINTLELSSIFKEDVQNKYGSDYINKLIDLKINSSGFLTGSIDQVFADNPNHEIAK
WWVLDWKSNWIGSSLSKEHRSTCGPSNYSISRMDEEMYHHHYPLQAHIYLLALHRFLNWR
LPDYSPQKHLGGYIYVFLRGLPDKEELEEKNFPQRTPGLIVEPAPIERIKKLDLLIKRQQ
K
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgactaatatagaattgtttcaaccgaataaatatcctttatcgaatggaatacgtcta
atagaagcaagtgctggaacagggaaaacattttctctttctcatcttgtcttaaggtta
ttaactgaaaaagaatattcaataaacgaaatactagttgttagctttacagaagcgacg
gcatcagaaataaaagcaagaattattgaaagattaattcttgctttaaaaataattgaa
tcaataaatacaaccgtaaaaccccataagatagacaatgtactaaatgaatgggtagac
ttaaatataacttctaaagaaagagccttatatatagcatcactactcttagaagcatta
gagagaattgacaatgcagatatcacaacaattcatggattttgcagtaaaacacttcgt
agagaatctattgagaatggaaataatttaaacccaagcatcgaaaaagattctaactca
ctaataaatgaaattgttgaagaatattggaaaaaagaaatattagaaatagaaatttca
gaattaaaaggtttatttaaaagtaattttaatcgtaagaatttgattgaagttcttagt
tcattggataatgacccaaataatagttttaaacaaacttttaatgacttgaaaatagaa
gaaagtctttcaaatcaattaaacaactatagtgaatcattatggataaaatttacgact
ctatgggaagagaagggccaggagcttgaagatagcttcagagagattgctaaggattta
agatctcagggtattaaagatacaaagccatactcatccaagcccagaaaaaatcgttat
gagcttttaagtaactggattgaaaaatataaagagaaaaagcgaccatcatatgaagat
attcaaaatcaaaatcttataaatgaatattttcatcctaaaaatatttaccaactagat
atgaagcataaaattgattcttgttcaaaagaaatggagccaattcttgatattatagga
gatttatatgatagtccaggtgaattcgtttgggagcatgctttgttatggactaaaaga
gaacttgaaaaaagaaaatctaaaaagggtttaataaattattctgatctacttaaatta
ttagatcctaaaaaccaaaatagaaatgcaattaaagatgaagttaatcataataatatc
tataaaaatctagagcaaagatataaagtagccttaatcgatgaattccaagatactgac
ccagtccaattaagattactaaaaaaagcctttggcaaccgatcatcacatctattgcta
atgattggagatccaaagcaagcaatctatagtttcagaggtggaagcttaaatacctat
atgaaagcaagagaagcttgtgatcaaattcatttaatgaatgctaattatagaagtaca
aaatctctaattttaacactcaataaattatttcttgatggtttaataagatcaaatcta
tcaactcaagaacttaatccatgttcacaagaagatctactagaactaaatggaataaaa
gaaccttttaaggtattaaatctaatagttactaatcaaaaagaaaaagctcaaagaata
aaattagattcaaaaagcaaaatagaggataaaattccgaaagttattggatcttatttg
ttagagctattaagcaataatcccaaagatttaaacccctcagatatttgcatattagtc
aatagacacgatcaagctaaaaacatccatagctatttatcaaaaataagaataccttcg
caactcttgagtaatgaaaatatatttactagagagggtgctcaaatcctacagattttc
attaattgtatcgtcagtccgcataatcaacaaaaacttgctctactagcttgttctgag
ctaatgcaatggaaaaaggaaaaactgataaaatcaaaaattgatggcgattttgattca
ttatcttcgaagttctatgaactttcaaaattatttccaacgattggattattaggctgt
ttgtctaactttctagaagggaaatcaatagctgatctttctaatagaggaactttatta
ggtgatctttaccaaagctctcagttagtagatgagcagatccatcgacagaagtttaat
gcattaagagcatcacaatggcttagtagtaaaaggttccagtcaattgagcaaatacct
gaagaatatcaacctaacagtgccattagtaatagctctgtaaacataattacaattcac
aagagtaaaggacttcaatttaaaatagtgatttgtccatacttgtggcaaaagcctcca
gatagaaaaagtcatttatggaaagataatcaaaatcttttgatttctaaaaagtataaa
tggaataaaaaatatagttcataccaagattttattagaaaagaatccttaaatgaagca
gagcggttagcttacgttgcttttacaagagctaaaaaacaattaatagtcctgtgggca
aatgctgctggtcaagaagggaaccctctttcaggatttttatttggctctgaatcaata
aatctaaagatagaagaccatacaaaggaaatgatggaaaattcattcacgaaaagagaa
ctaaacgttgatattcaagatgtaaaaataattgaaacaaatacgacatggtctcaacct
aaaagtgaagtcaaattatcgcttggagcaattcctacccatcaatttgaaaatagttgg
ggaaggtatagtttttcaaaatggataacacataaaaatgacgaattaattctaaaagac
ttatcagatgagttaaatgaagatcatgaatttaagggtgaaattgaggatatatctttc
caagaaattgatcacttgcttgtagagaaagataaaagtattgacagatcagaagatcaa
acatggtctaaagaaagtcctattggtgaatttccaaagggacctatagcaggaacttgt
cttcataaaatacttgaaagaatagatttcaatgatattgaaaatcaactaaaaatttca
actataatagaagaagaattaaatatagttaatataagtaattcatttattaaaccaatt
aatattttattaaagagaattgcaaatatccctttaggaggtcctttaggtaaatttaaa
atgaaaaatttaaatactaaaagctctatcaaagaattaaaatttgatattccaatttgt
catgaagcgaatccaattaatactctcgaattatcatcaatatttaaagaagatgttcaa
aataaatatggctcagactacataaataaactgatagatctaaaaatcaatagcagcggt
ttcctaaccggatccatagaccaagtttttgcagacaatccaaatcatgaaattgctaaa
tggtgggttttagattggaaaagtaactggataggaagttcgctatcaaaagagcatcgt
tctacatgtggtccatcaaattattcaatttccagaatggatgaagaaatgtaccatcat
cactatccactacaagcccacatatatttacttgctttacatagatttttaaattggagg
ctcccagattattcacctcaaaaacatcttggaggttacatttacgtatttttgagaggg
cttccagataaagaagagttagaagaaaagaattttcctcaaaggactccaggcttaatt
gtcgaacctgctcctattgaaagaataaaaaaattagatttgttgattaaaagacaacag
aaatga
DBGET
integrated database retrieval system
