Polymorphobacter megasporae: KTC28_16265
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Entry
KTC28_16265 CDS
T08573
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
Organism
pmea
Polymorphobacter megasporae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
AAA_16
AAA_22
ABC_tran
AAA_28
MMR_HSR1
cobW
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UAJ09828
LinkDB
All DBs
Position
complement(3474363..3477809)
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AA seq
1148 aa
AA seq
DB search
MAAVKRFFGNWWTLAIGATLLVTLILFFLCGPLVGVLLPARWWAIGLVWLIFAVVAGVRW
FRKRAAEKALAEAMAGPADLEGEAVSAKMKAALDRAKAGGKGSLYASPWYVIIGPPGAGK
TTLIQKSGLRLLNDEAAAGVGGTRNCDWWFADEAVLIDTAGRYTSQDSSADADAKGWTSF
LGSLKKARPMQPLNGIIVAMGLDEIARVSADGLDKHIVAIRGRIAELGRELGLELPVYVL
FTKADLVAGFVEFFDDLSVEGRRSVVGHTLPLVAARPSVAELAGGYDDVVQALADRLPAR
LQAETDPIRRGAALTFPARFIDLRARIIRLLDGVFGAGAAQAGATAGANGARLRGFYFTS
GVQQGTPFDRLLGDLAGTLGTGTRARPSSPRAFFVNKLLSDVVIAEAGLAGPNAARRRRD
RMLKLGVAIAGGLIALLLLVLLIWSYLANSKGQDATLATATSLGEGSKGLDAGDKVSLGA
SPAEPLDLLDALRDKLPYGATAAEHKPFGERPLYRSSLADESSRAYYDGLQRYLLPRLIT
TAEAALTAAGTDPVAVYEPLKVYLMLGNRAGAKRDDAYILRWLEDDLAARALPGEENAAT
RARIIGHAKALLADQGSFGRQLTGPLLDASLVERGQATMAAMSPAERALALMKQQVSGDD
WRLVGDGILKGEADAFANPGELAGIKVPYLFTKKGFLAGFIPNVAGIGKALDADRWMLGA
SAAAQAPLDTSELGQLYAAEYTKRWTAVLAAPQPGDYARDPMALARLSNPASSPLKKLTD
AIVANTTALLPNIKAPALPGGALGKLAGDLAGKEMKGSASQIAAKTIEDNFAGMKEYTAG
DSAPLKQLLGALGKYQLALAQAKVGGGGGAGGGGGGGSAGGGGGSGAIAAAAAELSVAAA
NAGAAVPALSDFVAHVAGGSSKAAETQRTTELRDAYAQKILPDCGRIFGAGYPFGDGADL
APADVTRVAGLVAGFGRDSLQPYLKKDGDPKKGWTWTSEPTVKGFQAGSAAAFQRAADTE
GLMGGNLVLRLAAAPTNKGGLRLRAGGVPMDLMPQSPAERFSWSSGGSQVAEYAQTGLPA
GTTAAPPLREEGPWALFRVLGHAKKTQLGPGKYRFAFTPDSALDVEVAGGPDPFTPTGPF
ALRCPAKL
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgtcaaacgcttctttgggaactggtggacgctcgcgatcggcgcgacgctg
ctcgttacgctgatcctgttcttcctctgcggtcccttggtcggcgtcctgctccccgcg
cgctggtgggcgatcggcctcgtctggctgatcttcgccgtcgtcgcgggcgttcgctgg
ttccgcaagcgcgccgccgaaaaggcgctcgccgaggcgatggcgggtcccgccgatctc
gagggcgaggccgtgtcggccaagatgaaggcagcgctcgaccgcgccaaggcggggggg
aagggctcgctctacgcctcgccgtggtacgtcatcatcggcccgccgggcgcgggcaag
acgacgctgatccagaaatcggggctgcggttgctcaacgacgaggccgcggcgggcgtc
ggcgggacgcgcaactgcgattggtggttcgccgacgaggcggtgctgatcgacaccgct
gggcgctacaccagccaggattcgagcgccgacgccgatgccaagggctggaccagcttc
ctcggctcgctgaagaaagcgcgcccgatgcagccgttgaacggcatcatcgtcgcgatg
gggctcgacgaaatcgcgcgcgtctcggccgacggcctcgacaagcatatcgtcgcgatc
cgcggacggatcgccgaactcgggcgcgagctcggcctcgaactccccgtctacgtcctg
ttcaccaaggccgacctcgtcgccggtttcgtcgagtttttcgacgacctgtcggtcgag
gggcggcgatcggtcgtcggccatacgctgccgctcgtcgcggcgcggcccagcgtcgcc
gagctcgcgggcgggtatgacgacgtcgtccaggcgctcgccgaccggctgcccgcacgg
ctccaggccgagaccgatccgatccgtcgcggcgcggcgctgaccttcccggcgcgcttc
atcgacctgcgcgcgcggatcatccgcctgctcgacggggtcttcggcgcgggcgcggcg
caagcgggcgcaaccgccggcgcgaatggcgcgcggctgcgcggcttctatttcaccagc
ggggtccagcaggggacgccgttcgaccggctgctcggcgatctcgcggggacgctcggc
acgggcacgcgcgcacggccgtcgagcccgcgcgcgttcttcgtcaacaaattgctctcc
gacgtcgtcatcgccgaggccgggcttgccgggccgaacgcggcgcggcggcgtcgcgac
cggatgctcaagctcggcgtcgcgatcgccggcgggttgatcgcgctgctcctccttgtc
ctgctgatctggagctacctcgcaaattcgaaggggcaggacgcgacgctagcgaccgcg
acgtcgctcggcgagggcagcaaggggctcgacgcgggcgacaaggtttcgctcggggcg
tcgccggccgaaccgctcgacctgctcgatgcgctgcgcgacaagctgccgtacggcgcg
accgccgccgagcacaagccgttcggcgagcgtccgctgtaccggtcgagcctcgccgac
gagtcgagccgggcgtattacgacggcctccagcgctatctgctgccgcgcctgatcacg
accgccgaggcggcgctgaccgccgcggggaccgacccggttgcagtctacgagccgctc
aaggtctatctgatgctcggcaaccgcgctggggcgaagcgcgacgacgcgtatatcctg
cgttggctcgaggacgatctcgcggcacgggcgctgccgggcgaggagaatgcggcgacg
cgggcgcggatcatcgggcatgcgaaagcgctgcttgccgaccaggggagcttcgggcgg
caattgaccggaccgctgctcgatgcgtcgctggtcgaacgcggacaggcgacgatggcg
gcgatgtcgcccgccgaacgcgcgctcgcgctgatgaagcagcaggtttcgggcgacgac
tggcggctggtcggcgacggcatcctcaagggtgaggccgatgcgttcgccaacccgggc
gagctcgccgggatcaaggtgccgtatctgttcaccaaaaagggcttcctcgccgggttc
attcccaacgtcgccgggatcggcaaggcgctcgacgccgaccgctggatgctcggcgcg
agcgcggcagcgcaagccccgctcgacaccagcgagctcgggcagctgtacgctgccgaa
tataccaagcgctggactgcggtcctcgccgcgccgcagccgggtgattacgcgcgtgac
ccgatggcgctggcgcggctgtcgaaccccgcgtcgtcgccgctcaagaagctgaccgat
gcgatcgtggcgaacacgaccgcgctactgccgaacatcaaggcaccggcgctgcccggc
ggggcgctcggcaagctcgcgggcgatctggcgggcaaggagatgaagggctcggcgtca
cagatcgcggcgaagacgatcgaggacaatttcgcgggcatgaaggaatataccgcgggc
gactccgcaccgctcaagcaattacttggggcgctgggcaagtatcagctcgcgttggcg
caggccaaggtcggcggtggtggcggtgcaggcggcggcggtggcggtgggtctgccggc
ggcggcggcggttcgggcgcgatcgcggcggcggctgctgagctgtcggtcgcggcggcg
aacgccggggccgcagttccggcgctatcggacttcgttgcgcatgtcgcgggcggatcg
agcaaggccgccgagacccagcggacgaccgaattgcgcgacgcctatgcgcagaagatc
ctacccgattgcggccgcatcttcggcgcgggctatccgttcggcgacggggccgacctc
gctcctgccgacgtcacgcgggtcgcagggttggtcgcaggcttcgggcgcgacagcctg
cagccgtatctgaagaaggacggcgacccgaagaagggctggacgtggaccagcgagccg
acggtcaagggattccaggcgggatcggcggcggctttccagcgcgcggccgacaccgag
gggctgatggggggcaacctcgtgctgcgcctcgctgcggcgccgaccaacaagggcggg
ttgcgcctccgcgccgggggcgtgccgatggacctgatgccgcaatcgccggcggagcgc
ttcagctggtcgagcggcggcagccaggtcgccgaatacgcgcagaccggcttgcccgcc
gggactactgccgcgccgccgctacgcgaggaagggccgtgggcgctgttccgcgtcctc
ggtcacgccaagaaaacccagctcgggccgggcaagtatcgcttcgctttcactcccgac
agcgcgctcgacgtcgaggtcgcgggcggccctgatccgtttacgccgacgggtccgttc
gcgctccgctgtccggcgaagctgtga
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