Pseudomonas mediterranea: E3Z27_22375
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Entry
E3Z27_22375 CDS
T08284
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
E3Z27_22375 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmed01007
]
E3Z27_22375 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmed03016
]
E3Z27_22375 (aspS)
03029 Mitochondrial biogenesis [BR:
pmed03029
]
E3Z27_22375 (aspS)
Enzymes [BR:
pmed01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
E3Z27_22375 (aspS)
Amino acid related enzymes [BR:
pmed01007
]
Aminoacyl-tRNA synthetase
Class II (A)
E3Z27_22375 (aspS)
Transfer RNA biogenesis [BR:
pmed03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
E3Z27_22375 (aspS)
Prokaryotic type
Other AARSs
E3Z27_22375 (aspS)
Mitochondrial biogenesis [BR:
pmed03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
E3Z27_22375 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QHA84205
UniProt:
A0A6I6QA27
LinkDB
All DBs
Position
complement(5132212..5133987)
Genome browser
AA seq
591 aa
AA seq
DB search
MMRSHYCGQLNESLEGQEVTLCGWVHRRRDHGGVIFLDIRDREGLAQVVFDPDRAETFAT
ADRVRSEYVVKITGKVRLRPAGAGNANMASGMIEVLGHELEVLNEAETPPFPLNEFSDVG
EETRLRYRFIDLRRPEMAEKLRLRSRMTTSIRRYLDENGFLDVETPILTRATPEGARDYL
VPSRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQIDIETS
FLDEKDIMGLTEGMIRNLFKEVLGLEFGDFPHMTWDEAMRRYGSDKPDLRIPLELVDVAD
QLKDVEFKVFSGPANDPKCRVAALRVPGAASMPRSKIDDYTKFVGIYGAKGLAYIKVNER
AKGVEGLQSPIVKNIPEANLNVILDRVGAVDGDIVFFGADKAKIVSEALGALRIKVGHDL
ELLTCEWAPLWVVDFPMFEENDDGSFTALHHPFTAPKCTPQELEANPATALSRAYDMVLN
GTELGGGSIRIHRKEMQQAVFRLLGIDEAEQEEKFGFLLDALKFGAPPHGGLAFGLDRLV
MLMTGAQSIREVIAFPKTQSAADVMTQAPGAVDAKALRELHIRLREQPKAE
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcagccattattgcggccaactgaacgaaagcctggaaggtcaggaagttact
ctttgcggatgggtccatcgtcgccgtgaccatggcggggtgattttcctcgatatccgt
gatcgtgaaggcctggcccaggtagtgttcgatccggaccgtgctgaaaccttcgccacc
gccgaccgcgtgcgcagcgaatacgtggtcaagatcaccggcaaggtgcgcttgcgtccg
gccggtgccggcaatgccaacatggcgtccggcatgatcgaagtgctgggtcatgagctg
gaagtgctcaacgaagcggaaaccccgccgttcccgctcaacgaattttccgacgtgggc
gaagaaacccgcctgcgctatcgcttcatcgacctgcgtcgtccggaaatggccgagaag
ctgcgcctgcgttcgcgcatgaccaccagcatccgtcgctacctggacgagaacggcttc
ctcgacgtcgagacgccgatcctgacccgtgccacgccggaaggcgcccgcgactacctg
gtgccgagccgtacccaccccggcagcttcttcgccctgccgcaatcgccgcagttgttc
aagcaattgctgatggtggccggcttcgaccgttactaccagatcgccaagtgcttccgc
gacgaagacctgcgtgccgaccgtcagcctgagttcactcagatcgacatcgagaccagc
ttcctcgacgaaaaagacatcatgggcctgaccgaaggcatgatccgcaacctgttcaag
gaagtgctgggcttggaattcggtgatttcccgcacatgacctgggacgaggccatgcgc
cgctacggttccgacaagccggacctgcgtatcccgctggaactggtggacgtggccgac
cagctcaaggacgtcgagttcaaggttttcagcggtccggccaacgatccgaaatgccgc
gtagccgccttgcgtgtaccgggtgcggcgagcatgccgcgcagcaagatcgacgactac
accaagttcgtcggcatctacggtgccaagggcctggcgtacatcaaggtcaacgagcgc
gccaaaggcgtcgaaggcctgcaatcgccgatcgtcaagaacatccctgaagccaacctc
aacgtgatcctcgatcgcgtcggcgcggtcgacggcgacatcgtgttcttcggcgccgac
aaggccaagatcgtcagcgaagccctgggtgcgttgcggatcaaggttggccacgacctg
gagctgctgacttgcgaatgggcgccgttgtgggtcgttgacttcccgatgttcgaagag
aacgacgatggcagcttcaccgccctgcatcacccgttcaccgcgccgaaatgcacgccg
caagagctggaggccaacccggctaccgctctgtcccgcgcctacgacatggtcctgaac
ggcaccgagctgggtggcggttcgatccgtatccaccgcaaggagatgcaacaggcggtg
ttccgtctgctgggcatcgacgaagcggaacaggaagagaaattcggcttcctgctcgac
gccctgaagttcggcgcaccaccccacggtggcctggccttcggcctggatcgcctggtg
atgctgatgaccggcgcccagtcgatccgtgaagtgatcgcattcccgaaaacccagagc
gcggccgatgtcatgacccaggccccgggtgcggtggatgccaaggcgctgcgcgaactg
cacatccgcctgcgtgaacagccaaaggctgagtaa
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