Pseudomonas mediterranea: E3Z27_23275
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Entry
E3Z27_23275 CDS
T08284
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed00470
D-Amino acid metabolism
pmed00550
Peptidoglycan biosynthesis
pmed01100
Metabolic pathways
pmed01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
E3Z27_23275
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
E3Z27_23275
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
E3Z27_23275
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmed01011
]
E3Z27_23275
Enzymes [BR:
pmed01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
E3Z27_23275
Peptidoglycan biosynthesis and degradation proteins [BR:
pmed01011
]
Precursor biosynthesis
Amino acid ligase
E3Z27_23275
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
ATP-grasp_5
RimK
GARS_A
ATPgrasp_YheCD
TTL
Motif
Other DBs
NCBI-ProteinID:
QHA84371
UniProt:
A0A6I6QCC1
LinkDB
All DBs
Position
complement(5364012..5364977)
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AA seq
321 aa
AA seq
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MTAAYANLVSTLDPKAFGRVAVLFGGKSAEREVSLKSGKAVLEALQGAGVDAFGIDVGDD
FLQRLLSEKIDRAFIILHGRGGEDGSMQGLLECLGIPYTGSGILASALAMDKLRTKQVWH
SLGIPTPRHAVLASEADCISAATELGFPLIVKPAHEGSSIGMAKVNSLPELTAAWKDASS
YDSQVLVEQWITGPEFTIATLRDQVLPPIALGTPHTFYDYDAKYVANDTQYRIPCGLDST
KERELMDLTAKACEALGIAGWGRADVMQDAEGQFWFLEVNTAPGMTDHSLVPMAARAAGL
DFQQLVLSILAASVGTQEPRG
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgcctacgccaacctggtctccacccttgacccgaaagccttcggccgtgtc
gccgtgctgttcggtggcaagagtgccgagcgcgaggtatccctcaagtccggcaaggct
gtgcttgaagccttgcaaggcgccggcgtcgatgcattcggcatcgacgtgggcgatgac
ttcctgcagcgcttgctgagtgaaaagatcgaccgtgcgttcatcatcctccacggtcgt
ggcggcgaagacggcagtatgcaaggcctgctcgaatgcctgggcattccctacaccggc
agcggcatcctggcttcggccctggcgatggataagctgcgcaccaagcaggtctggcac
agcctcggcatcccgacgccgcggcatgccgtgctggcgtccgaggccgactgtatttcg
gcggccacggaactgggcttccctttgatcgtcaaaccggcccatgaaggttcaagtatc
ggcatggcgaaagtgaattcgctgcctgagttgaccgcggcatggaaagacgccagttcc
tacgattcgcaagtgttggtcgagcaatggatcaccggtcccgagttcaccatcgccacc
ctgcgtgaccaggtgttgccgccgattgcgctgggcacgccccacacgttctacgactac
gacgccaagtacgtggccaatgacacccagtaccgcattccctgcgggctggacagcacc
aaggaaagagaactgatggacctcacggccaaggcctgtgaggcgctgggtattgccggt
tggggacgggcggacgtgatgcaggacgccgaggggcagttctggttcctggaagtcaat
accgcgcccggcatgaccgatcacagcctggtaccgatggcggcccgtgccgccggcctg
gatttccagcaactggtgctgtcgatcctggccgccagtgtcggcactcaagagccaaga
ggttaa
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