Pseudomonas mediterranea: E3Z27_24110
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Entry
E3Z27_24110 CDS
T08284
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridine(1911/1915/1917) synthase RluD
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
pmed
Pseudomonas mediterranea
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmed03009
]
E3Z27_24110 (rluD)
Enzymes [BR:
pmed01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
E3Z27_24110 (rluD)
Ribosome biogenesis [BR:
pmed03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
E3Z27_24110 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QHA84518
UniProt:
A0A6I6QI73
LinkDB
All DBs
Position
complement(5538214..5539176)
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AA seq
320 aa
AA seq
DB search
MSDKIELRAEVPSDLGGQRLDQVAAQLFTEHSRSRLSAWIKDGRLTVDGAVIRPRDIVHG
GAILELTAEQEAQGEWVAQDIALDIVYEDDDILVINKPAGLVVHPAAGHADGTLLNALLH
HVPDIVNVPRAGIVHRLDKDTTGLMVVAKTIQAQTQLVAQLQSRSVSRIYECIVIGVVTA
GGKINAPIGRHGQQRQRMAVMEGGKPAVSHYRVLERFRSHTHVRVKLETGRTHQIRVHMA
HINFPLVGDPAYGGRFRIPPAASVTMVESLKHFPRQALHARFLELDHPTTGKRMSWESPL
PDDFVWLLTLLKQDREAFVG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtccgataaaatagaacttcgcgcagaggtgccgtccgatttgggcggccaacgcctc
gatcaagtcgccgcccaactcttcaccgagcattcgcgctcgcgcctttccgcctggatc
aaggacggccgcctgacggtggatggggcggtcatccgtccgcgcgacatcgtccatggc
ggcgccatcctcgagctgaccgccgaacaggaggcccagggcgaatgggttgcccaggac
attgccctggacatcgtctatgaagacgacgacatcctggtgatcaacaagccggcgggc
ctggtggtgcatccggccgccggtcacgccgacggcaccctgctcaatgccctgctgcac
cacgtgccggatatcgtcaatgtgcccagggccggtatcgtgcatcggctcgacaaggac
accaccggtctgatggtagtggccaagaccatccaggcgcagacccagctggtcgcacaa
ctgcaaagccgcagtgtcagccgtatctatgaatgcatcgtgatcggcgtagtgaccgct
ggcggcaagatcaacgcccccatcggtcgtcacggtcagcaacgccagcgcatggcggtg
atggagggcggcaagccggcggtcagtcactaccgcgtgcttgaacgcttccgctcccac
acccatgtgcgggtcaagctggaaaccggtcgtacccaccagatccgcgtgcacatggcc
cacatcaacttcccgctggtgggcgacccggcctatggcggccgcttccgcattccgccg
gccgccagtgtgaccatggtcgaatccctgaagcacttcccgcgtcaggcgctgcatgcg
cgtttcctggaactggatcatccgaccaccggtaagcgcatgagctgggagtcgccgttg
ccggatgacttcgtctggctgctgacattgctcaagcaggaccgcgaggcgttcgtcgga
tga
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integrated database retrieval system
