Poecilia mexicana (shortfin molly): 106905521
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Entry
106905521 CDS
T08022
Symbol
col7a1
Name
(RefSeq) collagen alpha-1(VII) chain isoform X1
KO
K16628
collagen type VII alpha
Organism
pmei
Poecilia mexicana (shortfin molly)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
fn3
VWA
Kunitz_BPTI
VWA_2
DUF4992
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
106905521
NCBI-ProteinID:
XP_014825898
LinkDB
All DBs
Position
Unknown
AA seq
3071 aa
AA seq
DB search
MWSWVFTAAVLLSSITLADAQGRCNNVQAADIVFLIDGSSSIGRANFLQVKGFMAGIVKP
FASFVSESGIRFGAVQYSDTSRVEFAFNTHLTGTDVVNAVQNMNYKGGNTRTGAGLKYVS
DNFFNPDSARDVPKVTILITDGKSQDQVQEPAQKLRSQGVNVFAVGIKSADRNELAQVSS
KPSSDFTSFVGDFKLLNTLLPLVSPGVCSAAGGVYASDEAFSGPSNLQFTSQTTDSLRFR
WSPAGGPVSGYAIQYVPLSGLGQPITAELRQESVSASQRFFTAQDLRSGTDYLVTVIAQY
PNSVGESVSAKQRTRSLPGVSSLRLVQAGYFSLSIEWDQPSTPVQGYRLTYGPRGQPAAQ
LLEQSLPADASSVTLESLQPDTEYVINLYPLFSRNGASPSVLNARTLSLEAVQQLTVETV
SEGSVRVKWRRVSGAQAYRLVWGPFTGRSVETVEVAGDTELYTLSSLQSDTEYIVTIIPL
YEGNTEGPRATARFKIERQEQQVLRAVTTGPSSIRLTWRLIRSAEGYRLEWRAGEGSPLQ
SLSFPRSSTSYELTGLRPNTEYIFKLYTLYEGREEATPVSTENIDEQPIGSVSNLRVVES
LGSTVRIGWTGVAGATQYRIVILNSEDGTESIQVIPGNQTTLDLRDLTVGVSYGVSVTAL
VRSNEGETVTVFIKPEPAAGRVTNLRATNANSRRIRIAWQGVTGATGYRVTWRQGNNAEQ
SRLLGAESTFYTIDGLQPDEGVVIGVAPIVNQRVGEVVTLSSRTNPSTGALSGLRATEVL
SQRIRIAWSSFSRATGYKIVWRHEDGTETTQTVAADVSSYTIDGLRPNSAYTVQVSALVG
AREGSPAVLSVRTESDQSVVGTVTSLKVQEARGEAVRVSWVGVQGATAYRIIWRRVDGGE
ERSQLVGRDVSSMDLDQLDPGVQYEVQVIALVENREGSPVSVRITTPGYVTPPPTLPTTT
IRATEANADSVRLSWALLKGATGYILRWKEETDVGRGLSVTLPPSSSSYLVTGLRLGRRY
RFTIQPTFAGGVSPETFVDERTVCLGGRLDVVFLVPASTDRSDLVRPLRDIVTSAAGSLA
AIGPQDSQVGVVVYSFRPKIWFLLNRHSRFDTLLQEIQSTPFDESPGNNIGEAVTFTRQY
LLTPSAGRRPRVPGVVVIIADRKSVDNLTLAASGLRDAGVTVLAVGIGQADTEELRRAVT
DRSPQNILYAGNAERLNTLHPDLADLLCGIARIPEVTPGKEQCTVQCPRGEKGDRGETGA
RGRDGADGRKGEPGRDGLPGREGPRGPEGRPGTPGQTSPIDPSQRIKGEKGERGFPGVDG
NPGFPGRPGAPGNAGVPGSQGLPGVRGSPGEPGGQGTPGSKGDKGERGEPGSSVPGGGLP
GRKGEPGVPGIPGNPGRQGGDGAKGDPGVPGRSGQDGRPGIPGTPGLSIKGDKGSQGERG
PPGVGSGVAVKGEKGSPGIPGTPGGPGPRGPAGPQGSRGEKGEDGAGLPGPPGKQGETGD
RGPRGPAGEIGNKGDRGQPGEPGTRGDRGERGPAGETGEKGDPGKAGIPGSPGLRGLPGP
SGPAGEKGNEGARGEPGRSTAGLPGKKGEQGESGLPGSEGLRGEKGEPGQRGEKGSPGTG
GSGVLGPKGEPGERGLAGLNGRPGAKGDPGEAGERGENGRPGIPGKPGLPGKQGEKGDKG
DEGTPGESGLPGKPGERGLRGLPGQAGRPGEKGDLGDPGEQGRNGSPGPAGPRGEKGELG
PQGPAGPPGKVADIQGQLRGERGEKGDAGDPGEHGGKGQKGEAGTPGAPGLRGPEGPRGP
AGIKGDTGERGSPGEKGDRGASGLDGRPGLDGKPGSPGPPGSRGDPGKQGDAGRDGLPGL
RGEQGAPGPVGPPGNPGIPGKAGEDGKPGPVGKMGEDGVPGEDGRKGDKGDAGAAGRDGR
DGQKGDRGPAGPSGPSGPQGPVGLPGQVVYVKGVEAAPIPGPQGPPGTPGVPGIPGAVGA
RGERGPAGPKGDAGDPGEDGAPGKPGTAVDVQKALSGLGILVSDLKVLVDRKDTVVPAAV
EKGDKGDRGEPGLRGPSGADGARGFQGDRGPKGDQGERGPIGQTGPPGRAVLERGPEGPA
GPAGEPGKPGIPGVPGRAGELGEAGRPGEKGERGEKGDKGEAGLIGLTGPAGPPGQKGDS
ILAGTPGLRGLPGVKGEPGAAGPFGPKGEKGFVGPRGDKGDRGDPGDKGREGSMGVPGDP
GKPGQDGKPGFPGFPGVLGRPGNPGEPGMRGPTGPMGPAGNPGVPGVKGNQGEAGVGFQG
PPGAQGSTGLPGPPGPPGAVGPQGPPGLPGQVGEAGKPGVPGRDGVPGKEGLPGLPGKQG
IAGPPGLAGFKGEQGDSGPPGKAVAGPAGPKGDRGPPGVTLPGTTGERGLPGEKGNKGDK
GPAGIKGESGVAGEQGEQGEDGAPGSPGPKGDKGEKGLGQPGPLGRVGPQGLKGDPGLPG
PAGPPGPQGKAGDPGLPGVRGENGQPGPPGPPGERGLQGFAGRAGNPGPPGPSGPAGQPG
SAGTNGVKGDKGEIGVGVPGPRGERGDSGPRGEEGRAGLDGDRGPAGPPGIRGLRGEKGD
GGLPGEKGDKGDTVLVGGPPGAKGNKGETGDRGVKGGQGEKGTKGQEGPSGEQGLRGEPG
ERGSTGFPGARGPGGQKGEAGDPGVPGESGLPGKDGLAGRKGDKGEVGVSGLRGIKGDRG
PKGACGSDGPKGEKGDSGVHGRSGLPGRKGEQGDFGPAGAPGTPGKEGLVGPKGDRGFDG
AAGPKGAQGEKGERGASGIPGPPGPRGADGPPGLTGPQGLAGAKGPEGLQGQKGERGPVG
PAMVGPRGIPGIPGERGEPGNMGPDGAKGDRGEPGMTEDEIREYVRAEMKQHCACGGSGP
DTRSQPTLRARPTTEQELVLNGEKGRELRVVVNTNDPEYEHIYSIEALDDPLDDTLYFST
ESANLTEGEDFKTKAAKADPSKSSGAAGAHKKAAGQKQVRVPPLAADKSRSVRPKRAVQE
EGATDLCLLPMDEGSCQKYTLRWYFNSQVRTCRPFIYSGCKGNDNRFLHLEECEQACLRE
TEDPRPLQTTR
NT seq
9216 nt
NT seq
+upstream
nt +downstream
nt
atgtggagctgggttttcactgctgctgtcctgctgtcctccatcacacttgctgacgct
cagggcaggtgtaataatgtgcaggcagcagacattgtgttcctgattgacgggtcctcc
agtattggccgcgcaaacttcctgcaggtgaagggcttcatggctggaatcgtaaagcct
tttgccagctttgtcagcgagtcggggatccggtttggggccgtgcaatacagcgatacc
tcaagggtggagttcgcctttaacacacacctgacaggcactgatgttgtcaacgcggtg
cagaatatgaactacaaaggtggaaacacacgcactggagctggtctaaagtatgtttct
gataacttcttcaacccagactccgcccgcgacgtcccaaaggtcaccattctgatcact
gacgggaagtcacaagaccaagtgcaggaaccggctcagaagctacggagtcagggagtg
aatgtttttgcagttggaatcaagagtgcagacaggaacgaactggctcaggtttcctca
aagcccagcagtgatttcacctcatttgttggggacttcaagctgctgaatacgctcctt
cctctcgttagccctggagtgtgctcggcagcagggggagtctatgcaagtgatgaggcc
ttttctggtccgtctaatcttcagttcacgtcacaaacgactgattctctccggtttcga
tggagtcctgcgggaggccccgtgagcggctatgccatccaatacgtgccgctctccggt
ctgggtcagccgatcactgcagaactgcgtcaggaatcagtctcagccagtcagaggttt
ttcactgcgcaagatctcaggtcaggaacagactacctggtgactgtcatcgcccagtac
cccaacagtgttggagagtccgtttctgcaaagcagcgaaccaggtcactaccaggagtg
tccagccttcgcttggtccaggcgggctacttctccctctctatcgaatgggatcagcct
tcaactcctgtgcagggctacagactcacctatgggccacgaggacaaccagcggcccag
ctgctggagcagtctctgcctgcagacgcctcctctgtcaccttggagtctcttcagccc
gacacagagtatgtcatcaacttgtaccctctgttctccagaaacggtgcatccccgtcc
gtcctcaacgctcgcactttgagcctggaggctgtgcagcagttgacagtggagacggtg
tctgagggcagcgtccgtgtcaaatggagacgagtcagtggcgcacaagcgtaccgtttg
gtatggggaccattcacaggtcgtagcgtggagactgtggaggtcgctggtgacactgag
ctctatactttgtccagcttgcagtcggatactgagtacattgtcaccatcatcccgctg
tatgagggcaacactgaggggccccgagccacagccagattcaagatagaacgtcaagaa
cagcaggttctcagagcagtgaccacaggaccctcctcaatccgcctcacctggagactg
atccggtccgctgaaggctaccgcctggagtggagggcgggagaaggaagtcctctccag
agcctgtcctttcctcgaagctccaccagctacgagctaacgggtctccggccaaacact
gagtacatcttcaagctgtacacgctgtacgaaggccgtgaagaagccacgcctgtctcc
actgaaaacatagacgagcagccaataggaagcgtgtccaacctgagagtggtggagtca
ctgggcagcacagttcgaattgggtggacaggcgtggcgggggccacgcagtaccggatt
gttatcttaaacagcgaagatgggacagagtcgatccaagttattcccggaaaccagacg
acccttgacctcagagatctgacagtgggggtgtcatatggcgtcagcgtcactgcgctg
gtgaggtcgaacgaaggagaaaccgtcaccgtcttcatcaaaccagagccggctgcaggc
agagtgaccaatctcagagcaacaaatgcaaacagccggagaattcgcatcgcttggcaa
ggtgtcactggtgcaacaggatatagagtcacttggaggcaaggcaacaacgcagagcag
tctcgtcttctgggagcagagtctactttttacacaatagatggcctgcagccggatgag
ggtgtggtaatcggtgtcgcccctatcgttaatcagcgtgttggcgaagtcgtcactttg
tcttcaaggacaaatccctctactggagcgttgtctgggcttcgtgccactgaggttttg
tcacagaggatacgcattgcgtggtcatccttttctcgagctacggggtacaagatcgtt
tggcgccatgaagatggaactgaaacaacacaaaccgtagctgctgatgtctcctcctac
accatagacggtcttcggcctaactcggcttacactgtgcaggtttctgccctcgttggc
gctcgagaaggaagtccagctgtcctcagcgttagaacagaatccgaccagtcggttgtg
ggaactgtgacgtcgcttaaagtccaggaagcccgaggggaagcggtgcgggtctcctgg
gttggtgtgcagggagcaacagcttatcgcatcatttggaggagagtcgacggtggggaa
gagcggagccagctggtgggccgggatgtgagttccatggatctggaccagctcgatcct
ggagttcagtacgaggttcaggtcatcgctttagttgaaaacagggaagggtcgcccgtt
tccgtcagaatcaccacacctggttatgtcaccccaccccccacactaccaaccacaact
atacgagcgaccgaggctaacgcggattctgtgcggctgagctgggctctccttaagggc
gccacaggatatattcttcgctggaaagaggagacagatgtcggccggggcctctccgtc
acgctgcctccgtcgtccagctcgtacctggtgaccgggctgcgtttgggccgccggtac
agattcaccatccagcccaccttcgcaggcggagtttcacctgagacttttgtagatgaa
cgcaccgtgtgtctgggtggacgccttgacgtggtgtttcttgtgcctgcgtccaccgat
cggtctgacctggtgagacctctgcgggacattgtcaccagtgcagcagggtcgctcgca
gctattgggccccaagactcgcaggttggggtggtcgtgtacagctttagacccaaaatc
tggttcctgctcaatcgtcattcaagattcgacacgctgctccaagagatccagtctaca
ccctttgatgaaagcccagggaataacattggtgaggcggtgacgttcactcgacagtac
ctgctgaccccctcagctggacggagacccagggtgcccggggtggtcgtgatcattgct
gacagaaagtctgtggacaacctgaccctcgcagccagcggtctgagagatgcaggtgtg
accgtgctagctgtgggaataggccaagccgacacggaggagctgcggcgggctgtgact
gaccgaagcccacagaacatcctgtacgccggtaacgcggaacgactcaacactctgcac
cctgatctggccgacttgctttgtggaattgccagaatcccagaggtcactccaggtaaa
gagcagtgtaccgtacagtgtcctcggggtgagaagggagatcgtggcgagacgggtgca
agaggcagagatggtgcagatggacgcaagggcgagcctggccgtgatggtttgcctggg
agggaaggtccgagaggtcctgaaggacgtccaggaacaccaggacaaacgagccctatt
gacccttctcagcggataaaaggggagaagggggagaggggctttccgggagtggatgga
aatccaggatttccaggaagaccaggagctcctggaaatgcaggtgttccgggctcccaa
ggtctccccggggtcagaggaagcccaggtgaaccaggaggacaaggcacgccggggtca
aagggtgataaaggggagaggggtgagccgggttcctctgtgcctggtgggggtcttcca
gggaggaagggagagccaggcgtcccaggaataccaggtaatccgggtcggcaaggtggc
gacggagccaagggagaccccggagttccaggccgatcaggtcaggacggtcgcccagga
atcccaggaacgccgggactttccattaagggagataagggcagccaaggagagagggga
cctccgggagtgggaagcggtgtggccgtgaagggtgaaaagggctcccccggcatcccg
ggaacgcctggcggcccgggcccgagggggccggcagggccacagggcagcagaggagaa
aagggcgaagacggtgccggtctacctggacctccaggaaagcaaggagagaccggggat
aggggtccccgcgggcctgcaggtgagatcggcaacaagggagaccgaggacagccgggc
gagcctgggacacgaggagacaggggggagcgagggcctgctggggagaccggagagaaa
ggagacccagggaaggcaggcatcccaggatcaccaggcctgagaggtttaccaggccca
agtggaccagcaggagaaaaggggaatgaaggagcacgaggggagccgggcaggagtacg
gcaggtttaccagggaagaaaggagaacagggtgaaagtggtctgcctggatctgaaggc
ctgagaggggagaagggggaaccggggcaaagaggagagaaaggttctccaggtactgga
gggtctggtgttcttggacctaaaggagagccaggagagcgaggacttgcaggtcttaat
ggacgaccaggagccaagggagacccaggagaagcaggcgagaggggagagaacggacgc
ccaggaatcccaggaaaacccggcctgcctggaaaacagggagaaaaaggtgacaaaggt
gacgaaggcacacccggagaatctggacttccaggaaaaccaggagaaagaggtttgcgg
ggactgccgggtcaggcggggcggccaggagagaaaggagacctgggagatccgggagag
caggggagaaatggcagccctggacccgctggcccgagaggagagaaaggagagctggga
cctcaagggcctgcaggaccaccggggaaagtggctgacatccagggtcagctgagagga
gagcgaggggagaagggtgacgccggtgaccccggagagcacggcggcaaaggtcagaaa
ggggaagcggggactcctggagctccaggcctgcgaggtccggagggaccgagggggccg
gcagggataaaaggtgacacaggagaaagaggatcgcccggagagaagggagacagagga
gcgtctggcttagatgggcgtcctggtctggatggtaaaccaggctctccgggaccaccc
ggatcaaggggtgatcctgggaagcaaggcgacgctggaagagacggattaccgggatta
agaggagagcaaggtgcccctggtcctgttggtcctccaggaaatccaggaatacccggt
aaagcaggtgaagatggaaaacctggtcctgtgggcaaaatgggagaggatggagtgcca
ggtgaagacgggagaaagggcgacaaaggagacgccggagcagctggaagagatggccgt
gatgggcagaaaggggaccgtggtcccgctgggccctccggcccctctggaccgcagggg
cctgtcggattacctgggcaggttgtttatgtaaaaggtgttgaggctgcgcccatccca
ggtccacaggggcctccaggaacgccgggtgtgcctgggattccaggagcggtgggagcc
agaggtgagcgaggtccagcaggacctaaaggagatgctggagacccaggagaggacggg
gctcctggtaaacctgggacagcagtggatgtacaaaaagctctgtccggcctcgggata
ctggtgtcggatctgaaggtgcttgtggacaggaaggacacagtggtgcctgctgctgtt
gagaagggcgacaaaggagacagaggggagcctgggttgagaggaccatctggagcagat
ggcgctcgaggttttcaaggagataggggaccgaaaggggaccaaggggagcgagggccc
ataggacaaacggggcctccgggaagagctgttttagaacgaggaccagagggtcccgca
gggcctgccggggagcctgggaagccgggaataccgggcgttccagggagagctggggaa
ctcggagaggctgggaggccaggagaaaagggagagcgaggggagaaaggtgacaaaggc
gaagctggcttaattggattaacaggaccagctgggcctccaggtcaaaagggagattcg
attttggctggtactcctgggcttcgaggccttcctggagtgaagggagagcctggtgct
gcaggaccatttggacccaaaggagagaaaggttttgtgggacctagaggtgataaagga
gacagaggagatcctggagataaaggacgcgaaggttcaatgggggtcccaggggatcct
ggaaaacctggacaggatgggaaaccaggctttcctgggttcccaggagttctaggcaga
ccgggaaacccgggagagcctggcatgaggggaccaactggacccatgggtcctgctggc
aacccaggtgtgccaggtgtaaagggtaatcaaggagaagcaggcgtcggtttccagggt
cctcccggtgctcaagggagcacaggtctgcctggaccaccgggcccaccaggagctgtc
ggtccgcagggccccccaggactgccaggccaggtgggtgaagcggggaagcctggtgtt
cctggaagagacggggttcctggtaaagaaggactgcctgggttacctggaaagcagggt
attgcaggacctccagggctggctggcttcaagggggaacagggagacagtggtcctcct
gggaaggctgtggctggacctgctggtccaaaaggagacaggggtcctccgggtgtgacg
ctgccgggtacgactggagagcgaggcctacctggagagaagggcaacaagggagacaaa
ggccctgctggcatcaaaggagagagtggagtggctggtgagcaaggagagcaaggagag
gatggagcaccgggatcaccagggcctaaaggagataagggagagaagggccttggtcag
ccaggtccactcggtcgagtcgggcctcagggtttaaagggtgatccggggcttcctggt
ccagctggcccaccgggcccccaagggaaggctggagatcccggactgcctggtgtaaga
ggagaaaatggacaaccagggcctcctggacccccaggagaaaggggcctccagggattt
gctggccgtgcaggaaaccctggacctcctggtccttctgggcctgcagggcagccaggc
tctgctggtactaatggagtcaaaggtgacaagggggaaatcggtgttggagttcccggt
cccagaggagagaggggagattcaggacccagaggggaggagggccgagccggcttggac
ggggacagaggaccagcgggcccaccagggattagaggtcttcgaggagaaaagggagac
ggcggactcccgggtgagaaaggagataagggggacacggtgctggtgggaggaccacct
ggagcaaagggcaacaaaggagaaacgggtgacagaggagtcaaaggcggtcaaggagaa
aaaggaacgaaaggtcaagagggtccatcgggagagcagggtctgagaggagaacccgga
gagcgaggatccactggtttcccaggggccagaggccccggtggacagaagggagaggca
ggcgatcctggagtgcctggcgaatcgggtttacctggaaaagacggcctggcaggccgt
aaaggggacaaaggggaagttggtgtcagtggactgagaggaatcaagggcgaccgcgga
cccaagggggcttgtggatctgatggacccaaaggagaaaagggggattcaggcgttcat
ggacgatcaggcttaccaggaaggaaaggtgaacagggggacttcggacctgctggggcg
cctggtacgcctggaaaagaaggactagttggtcccaagggagacagagggtttgacggg
gccgctggacctaaaggagctcaaggagagaaaggtgaaaggggagcgtctggtatccct
ggtcctcctggtcccagaggggccgacgggccccccggcttaactggcccacaaggactg
gctggtgctaaaggccctgaaggactccaaggacagaagggggagagaggtccagttggc
cctgccatggtggggcctcggggcatcccaggaatccccggcgagcgaggagagccggga
aacatgggaccagatggagccaagggagacagaggagagccgggcatgacggaggatgag
atcagagagtacgttcgcgctgagatgaaacagcactgtgcgtgtggaggttcaggccct
gacactcggtcccagcccacactcagggctcgacctactacagagcaagaactggttctg
aacggtgagaagggccgggagctgcgtgtggtggtaaacaccaacgaccccgaatacgag
cacatctactccatcgaggccctggacgaccccttggacgacacgctctacttctccaca
gagtctgccaatctcactgaaggcgaggattttaaaacaaaagctgccaaagccgatccg
agcaaatcaagcggcgctgccggcgctcacaaaaaagctgctggtcagaaacaagtgaga
gtcccacctctggccgcagacaagtccagatcagtcaggcccaagagggctgtgcaagag
gaaggtgcgacagacctctgtctgctgcccatggatgagggcagctgtcagaagtacact
ctgcgttggtattttaatagccaggttcgaacctgcaggcctttcatctacagtggctgc
aaaggaaacgacaaccgcttccttcacctggaggagtgtgagcaggcctgcctccgggag
accgaagatcctcgacccttacagacgacacggtga
DBGET
integrated database retrieval system
