Poecilia mexicana (shortfin molly): 106919868
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Entry
106919868 CDS
T08022
Symbol
chd4
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 4 isoform X1
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106919868 (chd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmei03036
]
106919868 (chd4)
Chromosome and associated proteins [BR:
pmei03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
106919868 (chd4)
Chromatin remodeling factors
NuRD complex
106919868 (chd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
ResIII
HDA2-3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
106919868
NCBI-ProteinID:
XP_014846013
Ensembl:
ENSPMEG00000009633
LinkDB
All DBs
Position
Unknown
AA seq
1956 aa
AA seq
DB search
MSGSEDDRDDYGAADDRLMQDDEEEEISENESPKVKKKKKKAKKSRESKGSKRRSRREEL
TISSPEPMDMGGVEDVEDTGSAQRSESEGSDYTPGRKKKKKASGGKEKKRNSVPERSSKR
KEPEPEEDDDDDDDDSEPKSSSQLLDDWGMEDIDHVFTEEDYRSLTNYKAFSQFVRPLIA
AKNPKIAVSKMMMVLGAKWREFSTNNPLRGAAAANAALATANIPAAVETMVAEVTPAAEP
PAAPAEPLQTPAPPLRKAKTKEGKGPNARKKSKPAPKPQEKKNNNAKTKKVAPLKIKLGG
FNSKRKRSSSEEDEPDVDSDFENGSINSVSISEGSNSRSSRSKKKLSKNKPKRKKETEDG
DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGTWSCPHCEKEGIQWE
AREDASEGEEDNGETGEMEEDDHHMEFCRVCKDGGELLCCDSCPSSYHIHCLNPPLPEIP
NGEWICPRCTCPPLKGKVQKILTWRWGDPPPPTPVPRPPDLPAEAPDPAPLAGRSEREFF
AKWSNMSYWHCSWVTELQLEMHCQVMFRNYQRKNDMDEPPPIDFGEGEEDKCLKRKHKDP
MYTHLEEKYLRYGIKFEWLMIHRILNHSVDRKNNVHYLIKWRELAYDQATWESEDMDVPE
FDTYKVQYWNHRELMMGDDGRPGKKIKVKGRVKRPERPPENPVIDPTIKFERQPDYLDST
GGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSA
PLSTIINWEREFEMWAPDMYVVTYVGDKDSRAVIRENEFSFEDNAIRGGKKASRMKKDSS
IKFHVLLTSYELITIDMAILGSIDWACLVVDEAHRLKNNQSKFFRVLNNYPLQHKLLLTG
TPLQNNLEELFHLLNFLTPERFNNLEVFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADV
FKHMPSKTELIVRVELSPMQKKYYKFILTKNFEALNTKGGGNQVSLLNVVMDLKKCCNHP
YLFPAAAMEAPKMPNGMYDGSALTKSSGKLMLLQKMMRKLKEGGHRVLIFSQMTKMLDLL
EDFLENEGYKYERIDGGITGGMRQEAIDRFNAPGAQQFAFLLSTRAGGLGINLATADTVI
IYDSDWNPHNDIQAFSRAHRIGQNRKVMIYRFVTKASVEERITQVAKKKMMLTHLVVRPG
LGSKTGSMSKQELDDILKFGTEELFKDDGEGENKEEDSSIIHYDDKAIERLLDRNQDATD
DTELQSMNEYLSSFKVAQYVVKDEEEEEEEVQREIIKQEESVDPDYWEKLLRHHYEQQQE
DLARNLGKGKRIRKQVNYNDGSQEDRADWQDDQSDGQSDYSVASEEGDEDFDERSEANSR
RPNRKGLRNDKDKPLPPLLARVGGNIEVLGFNSRQRKAFLNAVMRYGMPPQDAFTTQWLV
RDLRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLIRKK
VQEFEHVNGQWSMPWMADLEENKRAAAQPDSPGKTPSTGTPADTQPNTPAPADDSVKNDE
ASKDGEKDAKKEGEADKNGKEPAKANSEVIAIPDDDEKVPVETQEKKNGEEPMETDKPSN
GEAESAKEKEGEGEKKSAEGGEEDKPAVDEKTEPSEVKPEEPEVKGEEKKEEKPEKMDTT
PPAEEKKEVKEEKETPKPEEAAKLQNGDGSKEGVATAAAAASTASGVSEEKKKAKTRFMF
NIADGGFTELHSLWQNEERAATVTKKTNEIWHRRHDYWLLAGIIQHGYARWQDIQNDVRF
AILNEPFKGEMNRGNFLEIKNKFLARRFKLLEQALVIEEQLRRAAYLNMSEDPSHPSMAL
NTRFSEVECLAESHQHLSKESMSGNKPANAVLHKVLKQLEELLSDMKADVTRLPATIARI
PPVAVRLQMSERNILSRLASRGPETQTQTQQQMPQQ
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaagtgaagatgacagagacgattatggagccgccgacgaccgcctaatgcaa
gatgatgaggaagaggaaatctcggagaatgagtctccgaaggtgaagaagaagaagaaa
aaggccaagaagagccgggagagcaagggcagcaagaggcggtcgcgcagagaggagttg
acgatcagctccccagagcccatggacatgggtggagtggaagacgtagaggatacgggc
tcggcccagcgctccgagagcgagggcagcgactacactccaggacggaagaagaagaag
aaagccagcggtggcaaagagaagaagaggaacagtgttcccgaaaggagttccaaaagg
aaagaaccagagccagaggaggatgacgacgatgacgatgatgactcggagccaaagtca
tcatctcagctcctggatgactggggcatggaggacattgaccatgtgttcaccgaggag
gattacagatccctgaccaactacaaggccttcagccagtttgtcaggccgctcattgca
gccaagaatcccaagatcgccgtgtccaagatgatgatggttttgggggcaaagtggcga
gagttcagcacaaacaaccctctgagaggagcagcagctgcgaatgctgcgctggctacc
gctaacataccagctgctgtagagaccatggtggcagaggtcacacctgcagccgagccc
ccggcggccccggccgagcctctgcagacgccggcgccgcctctccgcaaagccaaaacc
aaggagggcaaaggtcccaacgcccgcaagaaatccaaaccagcaccaaagccacaagag
aagaagaataacaatgccaagacgaagaaggtcgctcctttgaaaatcaagctgggaggc
ttcaacagcaaaaggaagcgctcctcgagcgaggaggacgagcccgacgtcgacagcgac
tttgagaatggcagcatcaacagcgtctccatctcggagggttcgaacagccgcagcagc
cgcagcaagaagaagctctccaagaacaaacccaagaggaagaaggaaacggaagatggc
gatggatacgagacggaccatcaggactactgcgaggtttgccagcagggaggggagatc
atcctgtgtgacacctgccccagagcgtaccacatggtgtgtctggaccccgacatggag
aaggccccggagggcacctggagctgcccgcactgcgagaaggagggcatccagtgggaa
gcaagagaggatgcctcagagggagaggaggacaatggcgagacgggtgagatggaggag
gacgaccatcacatggagttctgccgggtttgcaaagacggaggcgagctcctctgctgc
gactcgtgtccgtcgtcgtaccacatccactgcctgaaccctccgctgcccgagattccc
aatggggagtggatctgcccccggtgcacatgtccacccttgaaggggaaggttcagaag
atcctaacatggcggtggggagacccgcctcctcctacgcctgtgccacgccctccagat
ctccccgccgaagccccagaccccgcccctctggccgggcggtccgagagggagttcttc
gccaaatggtccaacatgtcttactggcattgctcttgggtcacagagctccagctggag
atgcactgccaggtgatgttcagaaactaccagaggaaaaacgacatggatgagccgccg
cccatcgacttcggcgaaggagaggaggacaagtgcctgaagaggaagcacaaggatccc
atgtacactcacctggaggagaaataccttcgctacgggatcaagtttgagtggctgatg
atccaccgcatcctgaaccacagtgtggacaggaagaacaacgtccactacctgatcaaa
tggcgcgagctggcgtacgaccaggccacctgggagtccgaggacatggacgtacccgag
ttcgacacctataaggttcagtactggaaccacagagagctgatgatgggagacgacggc
agaccagggaagaagatcaaggtgaaaggaagagtgaagcggccagagagaccccccgag
aacccggtgatagatccgaccataaagtttgagcggcagccggattacctggatagcact
ggtgggactctgcacccttaccagctggagggtctgaactggctgcggttctcctgggct
cagggtacagacaccatcctggctgacgagatgggtctgggcaagacggtccaaaccgcc
gtcttcctctattcgctctataaggagggtcattccaaggggccgttcctggtcagcgct
cctctctccaccatcataaactgggagagagagtttgagatgtgggcgcccgacatgtac
gttgtgacgtacgtcggagacaaagacagcagagccgtcatcagggagaacgagttctcc
ttcgaggacaacgccatccgcggagggaagaaggcgtcgaggatgaagaaagattcatca
atcaagttccacgtcctgctgacttcctatgagttgatcaccatcgacatggccatctta
ggctccatagactgggcctgcctggtggtggacgaggcccacagactgaaaaacaatcag
tcaaagtttttccgggtcttaaacaattatccgctgcaacacaagctactgctgacggga
actccactgcagaacaacctggaggagcttttccacctcctgaacttcctcacacccgag
aggttcaacaacctggaggtctttctggaagagtttgccgacattgctaaggaggatcag
atcaagaagcttcacgacatgctgggtccgcacatgctcaggaggctgaaggccgatgtc
ttcaagcacatgccctccaaaaccgagctcatcgtccgggtggagctcagtcccatgcaa
aaaaaatactacaaatttatcttgacgaaaaactttgaggccctcaacacgaaaggtgga
ggaaaccaggtttctctgctgaacgtcgtcatggacctgaaaaagtgctgcaaccacccc
tacctctttcctgcagcagctatggaagcgccaaagatgcccaatgggatgtacgatggg
agcgctctcacaaagtcatctggaaaactgatgctgctgcagaagatgatgaggaagctg
aaggaaggaggacacagagtcctcattttctcacagatgaccaagatgttggatctgttg
gaggacttcttggaaaatgaagggtacaaatatgagcggattgacggaggaatcaccggc
gggatgagacaggaagccatcgatcgttttaacgctcccggcgctcagcagtttgccttc
ttgttgtccacgagggccggaggtctgggaatcaatctggccacagccgacacagtcatc
atttacgactcggactggaatcctcacaatgacatccaggccttcagcagagctcatcgt
atcggtcagaacagaaaggtcatgatctacagatttgtcactaaggcctctgtggaggag
aggattactcaggtggccaagaagaagatgatgttgactcacctggtggtccgacccggt
cttggatccaagacgggctccatgtctaaacaggagctggatgacattctcaagtttgga
acagaagagctgttcaaggacgacggagaaggtgagaacaaagaggaggacagcagcatc
atccactacgacgacaaagccattgagcgacttctcgaccgcaatcaggacgccaccgac
gacacggagctgcagagcatgaacgaatacctgagctccttcaaagtggctcagtatgtg
gtcaaagacgaggaggaagaggaggaggaagtgcagcgagaaatcatcaagcaggaggag
agcgtcgacccagactactgggagaagctgctgcggcaccactatgagcagcagcaggag
gacctggccagaaaccttggcaaaggcaaacgcatccgcaagcaggtcaactacaacgac
gggtcacaggaagacagagctgattggcaggacgaccagtctgatggacagtcggattac
tctgtggcgtctgaggaaggggatgaagactttgatgagagatcagaggccaactctcgc
aggcccaacaggaagggcctgaggaacgacaaggacaaaccactgccccccctgctggcc
agggttggaggcaacattgaggtgttgggtttcaattctcggcagaggaaggccttcctg
aacgcagtgatgcgttatgggatgcctccgcaggacgccttcaccacccagtggctggtc
cgagacctgcgggggaaatctgagaaagaattcaaggcttacgtctctctgttcatgcgc
cacctgtgcgaacccggagcagacggagctgagactttcgcagatggcgtccccagagaa
gggttgtcccggcaacatgtcctcacacgcatcggcgtcatgtcacttatacgcaaaaaa
gtccaggagtttgagcacgtcaacggtcagtggtccatgccctggatggccgacctggag
gagaacaagagggccgcggctcagccggactctccagggaaaaccccgtccaccgggacc
cccgccgacacacagcccaacactcctgctccagctgatgactcggtgaagaatgacgag
gcatcaaaggatggagagaaagacgcaaagaaagaaggcgaggcagataaaaacggcaaa
gagccagctaaggccaacagcgaggttatcgccatcccggacgacgatgagaaggtccct
gtggagacgcaggagaagaaaaacggcgaggagccgatggagacggacaaaccgagcaac
ggagaagcggagagcgcaaaagaaaaggaaggagagggagagaaaaagagcgcagaggga
ggagaggaagacaaaccagcggtagatgaaaagacggagccgtcagaagtcaaacctgag
gagcctgaagtcaaaggagaggaaaagaaggaagagaagcctgaaaagatggacaccact
cctcctgcagaagaaaagaaagaagtgaaggaggagaaagaaactccaaaaccagaggag
gcggccaagctgcagaacggagacggcagcaaagagggcgtggctacggcggcggcggca
gcttccaccgccagcggcgtgagcgaggagaagaagaaagccaaaacccgattcatgttc
aacatcgcagatggaggattcacagagctgcactctttatggcagaacgaggagcgcgcc
gccacggttaccaagaaaaccaatgagatctggcaccgtcgccatgactactggctgctg
gccggcatcatacaacacggctacgcccgctggcaggacatccagaacgacgtgaggttt
gccatcctcaacgagccgttcaaaggggagatgaacaggggcaactttctggaaatcaag
aacaagttcctggcccgacggttcaagctgttggagcaggcgctggtgatcgaggagcag
ctgcgtcgcgccgcctacctcaacatgtcagaggatccctctcacccctccatggccctg
aacacccgcttcagcgaggtggagtgtctggccgagtcccaccagcacttaagcaaggag
tccatgtccgggaacaaaccggccaacgccgtcctgcacaaagtgctaaagcagttggaa
gagctgctgagtgacatgaaggcggacgtgacccgcctcccagcaaccatcgcccggata
ccgccggttgctgtccgtctccagatgtctgagaggaacatcctgagccgcctagcgagc
cgaggaccagaaacacagacgcagacgcagcagcagatgccgcagcagtag
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integrated database retrieval system
