Poecilia mexicana (shortfin molly): 106929949
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Entry
106929949 CDS
T08022
Symbol
smarcd3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106929949 (smarcd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmei03021
]
106929949 (smarcd3)
03036 Chromosome and associated proteins [BR:
pmei03036
]
106929949 (smarcd3)
Transcription machinery [BR:
pmei03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106929949 (smarcd3)
Chromosome and associated proteins [BR:
pmei03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106929949 (smarcd3)
PBAF complex
106929949 (smarcd3)
GBAF(ncBAF) complex
106929949 (smarcd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
TFIIA
S5p_N
F-protein
Motif
Other DBs
NCBI-GeneID:
106929949
NCBI-ProteinID:
XP_014862691
Ensembl:
ENSPMEG00000000343
LinkDB
All DBs
Position
Unknown
AA seq
519 aa
AA seq
DB search
MATEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYGGSPAVRPGL
PSPVMEPSRKRPAPSQQVQQQQQQQQQQQQQQQQAVQNRARKKPVGFPGASEMPARQMDM
REPQSDPTLGSNAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQE
ALKRPMKQQKRKLRLYISNTFNPARPDADDSDGSIASWELRVEGKLLDDPGKQKKKFSSF
FKSLVIELDKELYGPDNHLVEWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFK
LDLRLARLLGIHTQTRSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSE
IPQRLTNLLLPPDPIVINHVISVDPNDQKKTACYDIDVEVEDPLKSQMSSFLLSTANQQE
IASLDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEEE
RRAAFYHEPWSQEAVSRYFYCKIQQRRQELEQALAVRNT
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggctacggaggagacggcggggggagccaggaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcctggcatgccatctggagcgaggatgccccaccaagga
gcccccatggggccccctggccccccgtatggagggagtccggcagtgcggcctggcctg
ccctccccggtgatggagccaagtcgtaagcggcctgccccgtcccagcaggtccagcag
cagcagcaacagcagcagcaacagcagcagcagcagcagcaggccgtgcagaaccgcgcc
aggaagaagccagttggatttcccggagccagcgagatgccggcgaggcagatggacatg
agagagccccaatcagatcccacgcttggatcaaatgctaagagaaggaaaatggcagac
aagattcttccgcaaaggatccgggaactggtacctgaatctcaggcctacatggatcta
ctggctttcgagcgcaaactggaccaaaccattatgcgtaaacgcgtcgacatccaggaa
gctctgaagagaccaatgaagcagcaaaagcgtaaactaaggctctatatttccaacacg
ttcaacccagctcgacctgacgctgatgactcggatggcagcattgcatcatgggagctg
agggtagagggaaagctgctggatgatccggggaagcagaagaagaagttttcttccttt
tttaagagcttggtgatcgagctggacaaagagctgtacggtccggacaaccacctggtc
gagtggcaccgcacacccaccactcaggagacggacggcttccaggtgaagagaccggga
gacgtgagcgtgcgctgcaccctgctgctgatgctggactaccagcctccccagtttaag
ctggacctgcgcctggcgcgcctgctgggcatccacactcagactcgctcctgcatcatt
caggccctctggcagtatgtgaagaccaacaagctgcaggactcgcatgacaaagagtac
attaactgtgacaagtactttcaacagattttcgactgtcctcgcctgaagttctctgag
attcctcagcgcctcactaacctcctgctaccgcccgaccccatcgtcatcaaccatgtc
atcagcgttgaccccaacgaccagaagaagacggcctgctacgacattgatgtggaggtg
gaagaccccctcaagagccagatgagcagcttcctcctctccaccgccaaccagcaggaa
atcgcctccctcgacaacaagatccatgagaccatcgagtccatcaaccagctgaagatc
caacgggacttcatgctcagcttctccagagatcccaaaggctacatccaagactggctc
aagtcccaaagccgagacctcaagttgatgactgacgtggtggggaaccctgaggaggag
cggagggcggcgttttaccacgaaccctggtcccaggaggcggtcagccgctacttctac
tgcaagatccagcagaggagacaggagctggaacaggccttagcagtccgcaacacctaa
DBGET
integrated database retrieval system
