Parabacteroides merdae: INE87_02274
Help
Entry
INE87_02274 CDS
T07751
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pmer
Parabacteroides merdae
Pathway
pmer00470
D-Amino acid metabolism
pmer00550
Peptidoglycan biosynthesis
pmer01100
Metabolic pathways
pmer01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
INE87_02274 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
INE87_02274 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
INE87_02274 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmer01011
]
INE87_02274 (ddlB)
Enzymes [BR:
pmer01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
INE87_02274 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
pmer01011
]
Precursor biosynthesis
Amino acid ligase
INE87_02274 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
ATP-grasp
CPSase_L_D2
GARS_A
TTL
ATPgrasp_ST
RimK
Cro
Motif
Other DBs
NCBI-ProteinID:
QUT49792
LinkDB
All DBs
Position
complement(2697492..2698469)
Genome browser
AA seq
325 aa
AA seq
DB search
MKRNIAIVAGGDSSEIVISLKSAEGIFSFLDKDKYNVYIAIVKRDEWAVKLPGGEHTPID
KNDFSFRENGEIRHFDFAYITIHGTPGEDGRLQGYFDMIGMPYSSCGMFVSALTFNKFAC
NHYLKGFGVDIARSIHLFKGQTVTDEEVVSRLGLPVFVKPNDGGSSFGVTKVKEASAIQP
AIDKAFSEGREVVIESFIDGTEVTCGCYKTSDKEVVFPLTEVVTDNEFFDFDAKYNGQVQ
EITPARISAEQTEKVQRETSRIYDILGAKGLIRVDYIIPADGEPKLLEVNTTPGMTATSF
IPQQVRAAGLEMKDVMTDIIENEFN
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggaacattgctattgtagccggaggcgattcctccgaaatcgttatttcatta
aaaagtgcggaaggaatcttctcttttcttgataaagacaaatataatgtatatattgcc
atcgtaaaaagagacgaatgggcggtaaaacttcccggcggggaacacacaccaatagac
aagaatgattttagtttccgtgagaacggcgagatcagacattttgatttcgcctatatt
acgatccatggaactccgggagaagacggacgtctgcaaggatatttcgatatgatcgga
atgccgtattcttcttgtggtatgtttgtaagcgcacttacattcaacaagtttgcctgc
aatcattatctgaagggattcggtgtcgatattgcccgttctatacatttatttaaagga
cagactgtgacagacgaagaagtggtcagtcgtttggggcttccggtctttgtgaagccg
aacgacggcggcagtagtttcggagtgacgaaagtgaaagaagcctcggctatccagccg
gcgattgacaaggctttcagtgaaggccgggaagtggtcatcgaaagttttatcgacggg
accgaggttacatgcggttgctataagacatccgataaggaggtggtgttcccgctcacc
gaagtcgtgacggataacgagttcttcgatttcgacgccaagtataacggacaggtacag
gaaataacgccggcccgtatttctgcagaacaaacagaaaaagtacaacgcgagacatcg
aggatttacgacatattgggggcgaaaggtctgatccgtgtggattatatcattccggcg
gacggtgaaccaaaattgctcgaagtcaatacgactcccggtatgacggcaaccagtttt
atcccacagcaggtacgggctgccggtctggagatgaaagatgtgatgacagatattata
gaaaacgagtttaactaa
DBGET
integrated database retrieval system
