Pseudoxanthomonas mexicana: H4W19_04055
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Entry
H4W19_04055 CDS
T06805
Name
(GenBank) DUF11 domain-containing protein
KO
K20276
large repetitive protein
Organism
pmex
Pseudoxanthomonas mexicana
Pathway
pmex02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pmex00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
H4W19_04055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SdrD_B
DUF11
SpaA
CarboxypepD_reg
CarbopepD_reg_2
bMG3
TRAP_beta
fn3_3
CARDB
Motif
Other DBs
NCBI-ProteinID:
QND80976
UniProt:
A0A7G6UPM9
LinkDB
All DBs
Position
827662..837129
Genome browser
AA seq
3155 aa
AA seq
DB search
MTSRNSRAARSLKRVLARALLVAGSLLALPALAADLQLTDLSDSGYDPVPAGSDVVYSIT
LENGAGDTSAATSSIFDLPAGTTASSLPAFCAAAVGTPTRIVCNHGPLQGTLAGGSPITF
QIGVNTGGQAPGTVTMRGAVGFSANTPPATTPIASLTVADPFFAGDTNTANNIRSQATTL
TVAGDLRLQKSATPNPVVGGGVVTYTLTVTNDGPSPSTNFRVVDTLPAATTFVAGSFNGA
GWTFAQGSMTATHAGTLAVGASSTFSFRARVNAGSGNITNAAVVEAIGTPDPDPDNNDAE
VTTAITPGADLAISKSAAPAPAIAGQSITFTLTARNLGPSVAQNASITDALPAGFVITGG
TAPAAWSCSSEAANSVRTCNRTGDMPVGEVATITIVATVPSTGPNSSGDVTNTATITSAT
PDPNSPGNGTNNNSGTTTFTVLADGADLSLTKAKTPELIAVWDGIGSDADSRMTSTIVVR
NLGPRAATGQVQVVDELAAGEEFLSFAGPWTCSVDTPYAVPPARQRVTCDLNAGSLPLTV
NANAPQLQIVSRARAAGSLNNTACTGGSNGSLEPLTGNGINTDPETGNDCNGAGTRTTNE
RADLRIAKQTNGPGTADNVLSASQTTVTYTLTVTNDGPDSTTGVVINDDIPGFVPGRTTV
TASTIPAGWTCATGASVICRSGTTPLANGASATIVLTVQRALFDSAGSGAGTCGGVPISN
AFCNTAGVGIDANVAGSVGEVNTANNSASDWLQIDRVANVRTTAKNITSGATGQAGVNTT
YVMSYENQGPSIAPGVVFRDVFTLPANDAGFVLVSATRTGGGTATCAAAAGAGVTTTPAS
GGTSYANPTGGTATVTLTCQPLSMNNGQTESMTVVIRPNVNVGNTGRTFTNLADFYFDRD
NNGTPDPATGTDANGSFDYNLNTADDQRSATLPFNSGAVDLITNKVDVGFTGGVDPVGYN
ANDVSQNVITYRLTVRNNGPSLATNVRVTDTITPQAGRTVRYVGASSTTGGPYVVGACSV
TAGANPTTGAPMTLDCQMPGQGFSPNQPGVVASGQTSTLYVRFQYETAPGAAGDTLLNTV
TATSEETDTNPVNNTADQDTTIRARADVGMTKTTVVASPDSDPAVALPPTVTSVALRQPF
FYVVEGVNNGPGASLSLDRTGTNPLNGTGTVVTDTLPAGLVVTGPITWRKVGPNPGGGEV
PDGTGTCTQAGSTVTCNLGDVTSTGRVRIIVPSRWDSYPSGGSVNNTATIATQQVDPIPG
NNTVTIPLTVTRSSLAGVVFEDRNRTGANGGTHQGVGTEQGINGVTITLTGTDAYGNPVN
VTTTTNASGAYSFANLSPANAAGYTLTQTQPAAYVNSPSVLPTTGGSEPSLGGTYSAGSP
NSVIAAIPVGANDTGVRYNFPEVRRPSLSGLVYIDRNFSNAHEGSDGVIAGATVELLNAA
TGTVITTATTNASGAYSFTNLDPLIVYTLREALPAGNYQNRPTAVNPGLIGGAACVAGCT
PGTAVNGDAATTDRISTIDLGAGTDGTAFNFGEDAVAAISGSVYVDRNGNGDFDAADAGA
VNSRPNGGLQGVTVTLAGAGADGIFGNGDDPAPVTLQTDANGAYQFTGLVVGQNYRVTET
QPAGYGNGTEHPTNVIDVNALPLAGVTGRDFGETLGSLAGAVFEDFSTTPANNNNGSFDG
GENPIANATLTLTGTDLSGNPVNVTVQTNATGAYVFRDLLPPQAGTTYTITETQPTGYID
GRHTPGNAATPGTATTPNVIDDIAISEGQAATGYLFGELANAIISGTVYLDRDDDGGQDA
GEPGIPGVTVVIEGAGPDGVFGTSDDLPPVTLTTDANGGYSYGGATTGQNYRIVETQPTG
LANGQENPTNTITVTNLPASGSSGNDFGERAASLSGSVWLDADNDGVRDAGENGIAGVSV
ALPAGTVDALGNAVAAVVTDANGNYRFDDLLAGTYAVSEQLAQPVVGGVTTINGTTVAGR
IGGSASGTATPVATVPSAVAGIALPAGGASIDNNFGETLGVSLSGRVFFDADNDGVQSGA
AETGIEGVTITLTGTDDTGAAVSLSTTTDANGDYAFEGLRPGTYTVTEPTQPTGTSNGQT
VAGTVGGTPSGAATPITAVPSAISAIDLTTPGASSVGNNFGEIPLNSSIGGRVWRDSDND
GVIDPSEDGIGNVVVRLTGTDLAGNTITREVTTQPDGTYAFIELPPGTYTITEPEQPAGT
LNGITNAGNSGGTATPPTSTPSVISGITLGVGQDVTGNDFGEVPAGAISGRVYNDGNNNG
VIDTGEGGYANVQVVLTGTDDLGQAVNVTVTTDADGRYRFDDLRPGTYTVTEPTQPPETL
NGITSAGTIDGTAVGTATPVTTTPSAISGIVLPPGGESIDNNFGEIGDSPDLVVSKTATP
AIFTVNNTATYTLRVRNIGQQPSAGEYVVEDRLPAGLTLAATPVGTGWTCTGAPGDTRFR
CASSTVIAAGATSADTIVASVRVAATAATGSPVNNAVIVEGGGENEFRTPTPDERADFEG
NPGDLPVCDPAITQNACRLPTPVQLSASVSGTVWFDQGSDFGRIDSGDRRLSGWVVEVVN
GSGQVVGTATTAVDGTYSIADQVPGIPLNIRFRDPATGVVWGLPVSGDTIAGPPVPCDAA
AAIANGTASSCRSSDGGSTHLSVVLAPGANLPQQSLPLNPGGVVYDATTRTPVPGSRVTL
TPVGTCAGYSPEQHVLNAALGGYTVQGTSVSMTVGAEGFYQFLLGPDAPASCRFQLAVTP
PAGYTFESGMIPAETSPLTPPSTPGEGYPVQTNATAPTGPVGTSTTYYLELTLGSGVAVP
VHNHIPLDPQIAPGLVITKTGDRKTVEVGDSLVYTITIRQTAGASMGTVNVIDRLPHGFT
FIDGTARVDSAGIANPLGKPGPTLVFDVGPLAVGQQKVLTYRVRVGVGSQQGDGINRARA
WGCSIDGGCVDPTTLTPYPNGGVVPSNPAEYRVIVSGGVFADEGCVLGKIFVDCNVNHVQ
DREELGIPGVRMYFEDGTWMVSDSEGKYSYCGLPPKSHTLKIDPSTLPVGSRLTTSSNRN
LGDADSLFIDLKNGELHRADFIEGSCSNPVIEQVKARRTQGEIRAPETERNQQPLRFESK
PARAPQQGTDSANQRPIVEPRPTAPDEVRNGEVQP
NT seq
9468 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgcgcaattctcgcgctgctcgctcgctaaagcgcgtcctcgcccgggcactg
ctcgtggcgggcagcctgctggcgctgccggccctggcggcggacctgcagctcaccgac
ctgtccgacagcggctacgacccggtgcctgcgggcagcgacgtggtctacagcatcacc
ctggaaaacggtgccggcgatacgtcggccgcgaccagcagcatcttcgaccttcccgcc
ggcaccaccgccagcagcctgccggcgttctgcgccgcggccgtcggcacgccgacgcgc
atcgtctgcaaccacggtccgctgcagggcacgctggccggcggctcgccgatcaccttc
cagatcggtgtcaacaccggcgggcaggcgcccggcaccgtcaccatgcgcggtgcggtg
ggcttcagcgcgaacacgccgccggccaccacgccgatcgccagcctcaccgtcgccgat
ccgttcttcgccggcgacaccaataccgccaacaacatccgcagccaggctaccacgctg
accgtggcgggcgacctgcgcctgcagaagagcgccacgccgaacccggtcgtcggtggc
ggcgtcgtgacctacacgctgacggtcaccaacgacggccccagcccgtcgaccaacttc
cgcgtggtcgacacgctgcccgctgcgacgaccttcgtcgccggcagtttcaatggcgcc
ggctggacgttcgcacagggctccatgaccgccacccacgccggtacgctggcggtgggc
gccagttcgaccttcagcttccgcgcgcgcgtgaatgccggcagcggcaacatcaccaac
gcggcggtggtcgaggccatcggcacgccggatccggatccggacaacaacgacgccgaa
gtcaccacggccatcaccccgggtgcggaccttgcgatcagcaagtcagccgcgcccgcg
ccggccatcgcaggacagtccatcaccttcacgctgaccgcacgcaacctgggtcccagc
gtcgcgcagaacgcgagcatcaccgatgcgctgccggccggctttgtcatcaccggcggc
accgcgcccgcggcgtggagctgcagcagcgaggcggccaacagcgtccgtacctgcaac
cgcaccggcgacatgccggtcggcgaggtggcgacgatcaccatcgtggctaccgtgccg
tcgacgggtccgaacagcagcggcgacgtcaccaacactgccaccatcacctcggctacg
ccggatccgaacagccccggcaacggcaccaacaacaacagcggcacgacaacgttcacc
gtgctcgccgacggcgccgacctgtcgctgaccaaggccaagacgcctgagctgatcgcc
gtgtgggacggcatcggcagcgatgccgacagccgcatgacctcgaccatcgtcgtgcgc
aacctcggtccgcgcgcggccaccggccaggtgcaggtggtggatgaactggcggcgggc
gaggaattcctttccttcgctggcccatggacctgcagcgtcgacactccctatgcggtg
ccgccggcgcgccagcgcgtcacctgcgacctcaacgcgggctcgctgccgttgacggtg
aacgccaacgcgccgcagctgcagatcgtcagccgcgcacgtgcggccggttcgctgaac
aatacggcgtgtacgggtggttcgaacggctcgctggagccgctgaccggcaacggcatc
aacaccgatcctgaaaccgggaacgactgcaacggcgccggtacacgcaccacaaacgag
cgcgccgacctgcgcatcgccaagcagaccaacggcccgggcacggcggacaacgtactg
agcgccagccagaccacggtgacctacacgctgacggtcaccaacgacggccccgacagc
accaccggcgtggtgatcaacgacgacatcccgggcttcgttccgggccgtaccaccgtc
accgccagcaccattcccgccggctggacctgcgcgaccggcgcctcggtgatctgccgc
tccggcaccacgccgctggccaacggcgccagcgccaccatcgtgctgaccgtgcagcgt
gcgctgttcgacagcgcgggcagcggcgccggcacctgtggtggcgtgccgatcagcaat
gccttctgcaacaccgccggtgtcggcatcgacgcgaacgtggcgggctcggtcggcgag
gtgaacaccgccaacaacagcgcctcggactggctgcagatcgaccgcgtcgccaacgtg
cgcacgacggcgaagaacatcacctccggcgccaccggccaggccggcgtcaacaccacc
tatgtgatgtcgtacgagaaccagggcccgtcgatcgcgccgggcgtggtgttccgcgac
gtgttcacgctgccggcgaacgatgccggcttcgtactggtgtcggccacgcgcaccggt
ggcggcacggctacttgtgctgcggcggcgggcgcgggcgtcacgacgacaccggccagc
ggcggtacgtcgtatgccaatcccaccggcggaacggccacggtcacgctgacctgccaa
ccgctgtcgatgaacaacggacagaccgaaagcatgacggtcgtgatccggccgaacgtc
aacgtcggcaacacgggacgcacgttcaccaacctggcggatttctatttcgaccgcgac
aacaacggtacgccggatccggccaccggcactgatgccaacggcagcttcgactacaac
ctcaacaccgccgacgaccagcgttcggccacgctgccgttcaacagcggtgcggtagac
ctgatcaccaacaaggtggacgtgggctttaccggtggtgtggatccggtgggctacaac
gccaacgacgtcagccagaacgtgatcacctatcgcctgaccgtgcgcaacaacggtccg
tcgctggcgaccaacgtacgcgtgaccgacaccatcacgccgcaggcaggccgcaccgtg
cgctatgtcggcgcgtcgtcgacgacgggcggtccctacgtggtgggcgcatgcagcgtg
accgccggtgccaaccccaccaccggcgcgccgatgacgctggattgccagatgccgggc
caaggcttctcgcccaatcagcccggcgtggtcgccagcggacagaccagcacactgtac
gtgcgattccagtacgagaccgcgcccggtgccgccggcgatacgctgctgaacaccgtg
acggcgacgtcggaagaaaccgacaccaatccggtcaacaacacggccgaccaggacacg
acgatccgtgcacgtgccgacgtgggcatgaccaagacgaccgtcgtggcgtctcccgac
agcgaccccgctgtcgcgttgccgccgacggtcaccagcgtcgcactgcgccagccgttc
ttctacgtggtggaaggcgtcaacaacggtcctggcgccagcctgtcgctggatcgcacc
ggaaccaatcccctcaacggcaccggcacggtggtcaccgacacgctgccggcgggcctg
gtggtcacgggtccgatcacctggcgcaaggtgggaccgaatccgggcggcggtgaagtg
cctgacggcaccggcacctgcacgcaggcgggcagcacggtcacctgcaacctgggcgac
gtcacctccaccggccgcgtgcgcatcatcgtgccgtcgcgctgggacagctatcccagc
ggcggctcggttaacaacaccgcgaccatcgccacccagcaggtcgatccgatccccggc
aacaacacggtcaccatcccgctgaccgtcacgcgctcgtcgctggccggcgtggtgttc
gaggatcgcaaccgtacgggcgccaacggcggcacgcatcagggcgtgggaaccgaacag
ggcatcaacggcgtcaccattacgctgaccggcaccgatgcctacggcaatccggtcaac
gtcaccaccacgacgaacgccagcggcgcctacagcttcgccaacctgtcgccggccaat
gcggccggctacacgctgacgcagacccagccggccgcctacgtcaacagcccgtccgtg
ctgccgaccaccggtggcagcgagccgtcgctgggcggcacgtacagcgcgggttcgccg
aactcggtgatcgccgcgatcccggtcggcgccaacgacaccggcgtccgctacaacttc
cccgaggtgcgtcgtccgtcgctgtccggcctggtctacatcgaccgcaacttcagcaac
gcccacgagggcagcgacggcgtcatcgccggtgcgacggtcgaactgctgaacgccgcc
accggcacggtcatcaccacggcgacgacgaacgccagcggtgcctacagcttcaccaac
ctcgatccgctgatcgtctacacgctgcgcgaagcgctgccggccggcaactaccagaac
cgtccgaccgcggtgaatccgggcctgatcggcggtgcggcctgcgtcgccggctgtacg
ccgggcacggcggtgaacggcgatgccgccaccaccgaccgcatcagcactatcgacctg
ggggcgggcaccgacggtaccgcgttcaacttcggcgaagacgccgtggccgccatcagc
ggcagcgtctatgtcgaccgcaacggcaacggcgacttcgacgccgccgatgcaggtgcg
gtcaattcgcgcccgaacggcggcctgcagggcgtgacggtcacgctggccggcgccggt
gcggacggcatcttcggcaacggcgacgatccggcaccggtgacgctgcagaccgacgcg
aacggcgcgtaccagttcaccggcctggtggtcgggcagaactaccgcgtcaccgaaacg
cagccggccggttacggcaacggcaccgaacacccgaccaacgtcatcgacgtcaatgcg
ctgccgctggccggcgtgaccggtcgcgacttcggcgaaacgctgggctcgctggcgggc
gcggtgttcgaggacttctcgaccacgccggccaacaacaacaacggcagcttcgacggt
ggcgagaatccgatcgccaacgccacgctgacgctgaccggcaccgacctgtccggcaat
ccggtcaacgtcaccgtgcagaccaatgcgacgggtgcgtacgtgttccgcgacctgctg
ccgccgcaggccggcaccacgtacacgatcaccgagacgcagccgaccggttatatcgac
ggccggcacacgccgggcaatgcggcgacgccgggtacggcgaccacgcccaacgtcatc
gacgacatcgcgatcagcgaaggccaggcggcgaccggttatctgttcggcgaactcgcc
aacgccatcatcagcggcacggtctacctggaccgcgacgacgacggtggccaggatgcc
ggcgagccgggcattcccggcgtcaccgtggtgatcgagggcgcgggcccggatggcgtg
ttcggcacgtcggacgacctgccgccggtcaccctgaccacagacgccaacggcggctac
agctatggcggtgcgaccaccggccagaactaccgcatcgtcgagacgcagcccaccggg
ctggcgaacggccaggaaaacccgaccaacaccatcaccgtcaccaacctgccggcgagc
ggctccagtggcaacgacttcggcgagcgcgccgcgtcgttgagcggcagcgtgtggctg
gacgccgacaacgacggcgtgcgtgatgcgggcgagaacggcatcgccggcgtcagcgtc
gcgctgcccgcgggcaccgtggatgcgctgggcaacgccgtggccgcggtcgtcaccgat
gccaacggcaactaccgcttcgacgacctgctggccggtacgtatgccgtcagcgagcag
ctcgcgcaaccggtggtcggtggcgtcaccacgatcaacggcaccaccgtggccggcagg
atcggcggcagcgccagcggtaccgccacgccggtcgcgaccgtgcccagcgcggtcgcc
ggcatcgcgctgcccgcgggcggcgcgtcgatcgacaacaacttcggcgagacgctcggc
gtgtcgctgtcgggtcgcgtgttcttcgacgccgacaacgacggcgtgcagtccggcgcg
gccgagaccggcatcgagggcgtgaccatcacgctgaccggtaccgacgacaccggcgca
gccgtgtcgctgagcaccaccaccgacgccaacggcgattacgcgttcgaaggcctgcgt
ccgggcacctacacggtgaccgaaccgacccagccgaccggcaccagcaacggccagacc
gtggccggcaccgtcggcggcacgccgtcgggcgccgccacgcctatcaccgctgtaccc
agcgcgatcagcgcgatcgacctgaccacgccgggcgcgagctcggtcggcaacaacttc
ggcgagatcccgctcaacagttccatcggtgggcgcgtgtggcgcgacagcgacaacgat
ggcgtcatcgatccgtcggaagacggcatcggcaacgtcgtcgtgcgcctgaccggcacc
gacctggccggcaacacgatcacccgcgaagtgaccacgcaaccggacggcacgtacgcc
ttcatcgagctgccgccgggcacgtacaccatcaccgagcccgagcagccggcgggcacc
ctcaacggcatcaccaacgccggcaacagcggcggtaccgccacgccgccgacgtccacg
ccgtccgtcatcagcggcatcacgctgggcgtgggccaggacgtcaccggcaacgacttc
ggcgaagtgccggctggtgcgatcagcggccgcgtctacaacgacggcaacaacaacggc
gtcatcgacacgggcgagggtggctacgcgaacgtgcaggtggtgctgaccggcaccgac
gacctgggccaggcggtcaacgtcaccgtgaccaccgacgccgacggccgttaccgcttc
gacgacctgcgtccggggacgtacacggtgaccgaaccgacgcagccgccggaaacgctc
aacggcatcaccagcgccggcaccatcgacggcaccgccgtcggtactgcgacgccggtg
acgaccacgccgtctgcgatcagcggcatcgtgctgccgccgggtggcgagtcgatcgac
aacaatttcggcgagatcggcgattcgcccgacctggtggtcagcaagaccgccacgccg
gcgatcttcaccgtcaacaacaccgccacctacacgctgcgcgtgcgcaacatcgggcag
cagcccagcgcgggcgagtacgtggtggaagaccgcctgccggccggcctgacgctggcg
gccacgccggtgggcacgggctggacctgcaccggcgcgccgggcgacacccgcttccgc
tgcgcgagcagcacggtgatcgccgccggcgccacctcggccgacaccatcgtcgcctcg
gtgcgcgtcgccgcgacggccgccaccggttcgccggtgaacaacgcggtgatcgtcgag
ggcggtggcgagaacgagttccgcacgccgacgccggacgaacgcgccgacttcgaaggc
aacccgggcgacctgccggtgtgcgacccggcgatcacgcagaacgcgtgccgcctgccg
acgccggtgcagttgtcggcctcggtgtcgggcacggtgtggttcgaccagggcagcgac
ttcggccgcatcgacagcggcgaccgtcgtctgtccggctgggtcgtggaagtggtcaac
ggcagcggccaggtcgtcggtaccgcgaccaccgccgtcgacggcacgtactccatcgcc
gaccaggtgccgggcattccgctgaacatccgcttccgcgatccggcgacgggcgtggtg
tggggcctgccggtcagcggcgacacgattgccggtccgccggtgccgtgcgatgccgcc
gccgcgatcgccaatggcaccgcaagttcgtgccgcagcagcgatggcggaagcacgcac
ctgtcggtggtgctggcgccgggcgcgaacctgccgcagcagagcctgccgctgaacccg
ggcggtgtggtctacgacgcgacgacgcgtacgccggttccgggttcgcgcgtcaccctg
acgccggtcggcacctgcgcgggctactcgcccgagcagcacgtgctgaacgccgcgctg
ggcggttacaccgtgcagggcacatcggtatcgatgacggtgggtgcggaaggcttctac
cagttcctgctgggtccggacgcaccggcgtcgtgccgcttccagctggcggtgacgccg
ccggccggctacacgttcgagtccggcatgattccggccgagacctcgccgctgacgccg
ccgtccacgccgggcgaaggctatccggtgcagacgaacgcgaccgcaccgaccggtccg
gtcggtacatcgacgacgtactacctggagctgacgctgggttcgggcgtcgccgtgccg
gtgcacaaccacatcccgctggatccgcagatcgcgccgggcctggtcatcaccaagacc
ggcgaccgcaagacggtggaagtgggcgacagcctggtctacaccatcaccatccgccag
acggcgggtgcgtcgatgggcacggtcaacgtgatcgaccgcctgccgcacggcttcacc
ttcatcgatggcaccgcgcgcgtcgacagcgccggcatcgccaatccgctgggcaagccc
ggcccgacgctggtgttcgacgtcggcccgctcgcagtcggccagcagaaggtgctgacc
taccgcgtgcgcgtgggcgtcggcagccagcagggcgacggcatcaaccgggcgcgtgcc
tggggctgttcgatcgacggcggctgcgtggatccgaccacgctgacgccgtatccgaat
ggcggcgtggtgccgtccaacccggcggagtaccgcgtgatcgtcagcggcggcgtgttc
gccgacgaaggctgcgtgctgggcaagatcttcgtggactgcaacgtcaaccacgtgcag
gaccgggaagagctgggcatccccggcgtgcgcatgtacttcgaggacggcacctggatg
gtcagcgactcggagggcaagtacagctactgcggcctgccgccgaagagccacacgctg
aagatcgatccgtcgaccctgcccgtcggttcgcgcctgaccaccagcagcaaccgcaac
ctgggcgatgcggacagcctgttcatcgacctcaagaacggcgagctgcaccgcgccgac
ttcatcgagggcagctgctccaacccggtgatcgaacaggtgaaggcgcgccgcacgcag
ggcgagatccgcgcaccggaaaccgagcgcaaccagcaaccgctgcgcttcgagagcaag
cctgcgcgcgcgccgcagcagggtaccgactcggccaaccagcggccgatcgtcgaaccg
aggccgacggcgccggatgaagtccgcaacggggaggtgcagccatga
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