Pseudomonas mendocina NK-01: MDS_0302
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Entry
MDS_0302 CDS
T01473
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
pmk
Pseudomonas mendocina NK-01
Pathway
pmk00470
D-Amino acid metabolism
pmk01100
Metabolic pathways
pmk01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MDS_0302
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
MDS_0302
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmk01011
]
MDS_0302
Enzymes [BR:
pmk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
MDS_0302
Peptidoglycan biosynthesis and degradation proteins [BR:
pmk01011
]
Precursor biosynthesis
Racemase
MDS_0302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
AEB56333
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All DBs
Position
320837..321910
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AA seq
357 aa
AA seq
DB search
MRPARALIDLDALRHNYQLARELSGARALAVVKADAYGHGAVRCAQALEAEADGFAVACI
EEALALREAGIGAPILLLEGFFETDELALIDQHDLWCVVHAQWQIEAIEQAQLSKPLSVW
LKLDSGMHRVGLHPSDYQQAYRRLLASGKISKIVLMTHFARADEPECERTAEQLAVFQQA
REGLAAEVSLRNSPAVLGWPQVPSDWVRPGIMLYGATPFEQAQEQAARLLPVMTLESKVI
SVRELPAGEPVGYGARFVSERPTRVGVVAMGYADGYPRHAPTGTPVMVDGQPTRLIGRVS
MDMLTVDLTDLPQAGLCSRVELWGKQVLASDVAMAAGSIPYQIFCNLRRVPLLYLGG
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcgccctgcccgtgcccttatcgacctggacgccttgcgtcacaactaccaactggcc
cgcgagttgagcggcgcccgcgctctggccgtggtcaaggccgatgcctatgggcacgga
gcggtgcgttgcgcgcaggcactcgaagccgaggccgatggttttgccgtagcctgtatc
gaagaagcgctggcgctgcgcgaggccggcatcggggcgccaatcctgctgctcgaaggc
ttcttcgagaccgacgaactggcgctgatcgaccagcatgacctatggtgcgtcgtgcat
gcgcagtggcagatcgaggccatcgaacaggcccaactgagcaagccgctgagcgtgtgg
ctcaaactcgacagcggtatgcaccgcgttggcctgcatccaagcgattaccagcaggct
tatcgtcgtctgctggccagcggcaagatcagcaagatcgtgctgatgacccacttcgcc
cgtgccgacgagcccgagtgcgagcgtactgccgagcagttggccgttttccaacaggcg
cgcgaaggcctggccgccgaggtcagcctgcgcaactcaccggccgtgctcggctggcca
caagtgcccagcgactgggtgcgccccggcatcatgttgtatggcgccacgccgttcgaa
caggctcaggagcaggccgcgcgtctgctcccggtgatgaccttggagtcgaaggtgatc
agcgtgcgcgaactgccagccggcgagcccgtgggttacggtgcgcgcttcgtctccgag
cgaccgactcgtgtcggcgtggttgccatgggctatgccgacggctatccacgccatgca
ccgaccggcacgccggtgatggtggacggccagccgactcgcctgatcggccgtgtgtcg
atggacatgctcaccgtcgacctcactgatctgccacaggcgggtctgtgcagccgtgtc
gagctgtggggtaagcaggtgctggccagcgatgtggccatggctgcgggcagcattcct
tatcagattttctgcaacctgcgccgagtaccgctgctctatctcgggggctga
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