Pseudomonas mendocina NK-01: MDS_0872
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Entry
MDS_0872 CDS
T01473
Name
(GenBank) diguanylate cyclase/phosphodiesterase
Organism
pmk
Pseudomonas mendocina NK-01
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_3
PAS_8
Motif
Other DBs
NCBI-ProteinID:
AEB56903
LinkDB
All DBs
Position
complement(957867..961997)
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AA seq
1376 aa
AA seq
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MLVLAILGLLAWQLTQEYRQLLDNQRQLSEGYAGQLAKHVSLNMRLKAQAGQAMLQNSPA
HAGDGSDVLATLRSIFPTLGSVAWLDANGQLLADSDSASRDLSFIRSLQQRSGSAPYHFA
FSALDGGVIYLLLRQPDDSLRILRMRASALRDWLREQHQSEYLWLLEDLQSQRVIARADG
LQQAGGFIAPVTAAEQAQSLELIALPGSDWQLRALFDADRVGNELMPTLAGKFLLFALCS
LLTLAALYGLQREQRRLQRLNTESRRSLRQAASALGAVEERILVTQADGKLRYLNPQAEA
LFGLSSEAAWDMYLLDLLPDLDPLLLNSPQANDLGPELVRVESEGRARLFAVTRSDISEI
GRQAGYVWVLRDVTDEQQAMRVLQETRRRYQDIFEGTGVALCVLDLSGVRSLLLQHKLRD
AAGLQRWLRADAEHQELLIEQLRITEANQVALNLLGVKSTEQAWQQLIDNGPVQQDDLRY
RLAVAVIEGPNLVELETQLVTAQGLQRHVWLVLRLPEMIQDYQAVTLSISDITSRKRIEL
SLIERERFWSEVVRSVPDLLYVHDMQNRQVLFSNHSLGLQLGYSKAELRAMREDFWVQVL
HPDDAEYYWRIRNLQKVVGDGLLLESVLRWRHRNGQWHWFSIREQALARDDHGRVSRLIG
VAKDITEQIERNQSLRDSEQRYRLLAESISDVIFSTDSALNLNYVSPSVEPVLGYSVNWV
IANSFYSLAANPQQLEGLNLLLERIRDALGERDRLNRLRDELPDQLFVFDCLRADGHKIP
VELRLVLMWDESGRFEGILGVGRDISQQRRAEKDLRMAATVFEHSTAAILVTDPAGYIVQ
VNKAFSRVSGYSAGQVLDQLPGMLTADRQQATHMQYILGQLNQRGSWEGEVWLKRKGGEN
FPAWVGITAVHDEEGDLVSYVCFFSDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLH
SALQHAERHNEWVVLMFLDLDRFKPINDSLGHAAGDRMLKDVAVRLSACVDGDDTVARMG
GDEFTLLLQPRATREGALNRAIHVAEQILSSLARPFVLEGREFFVTASIGIALAPQDGNE
LSQLMKNADTAMYHAKERGKNNFQFYQADMNASALERLELESDLRHAQEQGQFVLHYQPQ
FSGDGRRLTGVEALLRWNHPTRGLVPPDEFIPVLEELGLVVQVGEWVLEESCRQLKAWHE
EKIRIPKVSVNLSARQFGEGDLTARIATILERTGVAPACLEVELTESILMRDVSSAMQTL
NELKRLGLCIAVDDFGTGYSSLNYLKQFPIDVLKIDRSFVDGLPDGEQDAQIARAIIAMA
HSLNMMVIAEGVESHAQLEFLREHGCDEVQGYLLGRPMQARQFSAQFGGAALFILS
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
gtgttggtgctggcgattctgggcttgctggcctggcagttgacgcaggaatatcgccag
ttgctcgataaccagaggcaactgagcgagggttacgccggccagctggccaagcatgta
agcctgaacatgcgcctgaaagcacaggcaggccaggcgatgctgcaaaacagcccggcg
cacgccggcgacggcagcgacgtgctcgcgacactgcgcagtatatttccgacgctgggc
agcgtggcctggctcgatgccaacgggcagttgctggccgacagcgacagcgcgtcacgc
gacctcagcttcattcgcagcctgcaacaacgcagtggctcggcgccttaccacttcgcg
ttcagcgcactggatggcggtgtgatctacctgctgctgcgccagcccgacgacagtctg
cgcatcttgcgtatgcgcgccagtgcactgcgcgactggctgcgcgaacagcaccagagc
gaatacctatggctgctcgaggatttgcagagccagcgagtgatcgcccgtgccgacggc
ctgcagcaggctggcggcttcatcgccccggtcactgctgcggagcaggcgcaaagcctg
gaactgatcgccctgcccggcagcgattggcagttgcgcgccttgttcgatgccgatcgc
gtcggcaacgagctgatgccgaccctggccggcaagttcctgttgttcgccctgtgcagc
ctgctcaccttggcggccttgtacggcctgcaacgcgagcaacgccgcctgcaacgcctg
aacaccgagtcacgccgctcgctgcgccaggctgccagcgctctcggcgccgtcgaagag
cgcatattggtgacccaggctgacggcaagttgcgctacctgaacccacaggccgaggcc
ctgttcggcctcagcagcgaagcggcatgggacatgtacctgctggatttgctgcccgat
ctcgacccactgctgctcaacagcccgcaggccaatgatctgggaccggagctggtccga
gtggaaagcgagggacgcgcgcgcctgttcgccgtgacccgcagcgatatcagcgaaatc
ggccgccaggccggctacgtctgggtgctgcgcgacgtgaccgacgagcaacaggccatg
cgcgtgctgcaggaaacccgcaggcgttaccaggacatcttcgaaggcaccggtgtggca
ctgtgcgtgctcgatctctccggtgtacgcagcctgctgctgcagcacaagctccgtgac
gcagcgggcctgcagcgctggctgcgagccgatgccgagcatcaggagctgctgatcgag
caactgcgcattaccgaagccaaccaggtcgcactcaatctgctcggcgtgaagagcacc
gagcaggcctggcagcaactgatcgacaacggcccggttcagcaggacgacctgcgctat
cgcctggctgtggccgtgatcgaaggccccaatctggtggaactggaaacccagctggtc
accgcgcaggggctgcagcgtcacgtctggctggtactgcgcctgcctgaaatgattcag
gattatcaggccgtcaccctgagcatcagcgacatcaccagtcgcaagcgcatcgagctg
tcactgatcgagcgcgagcgcttctggtcggaggtcgtgcgttcggtgcccgacctcctt
tatgtgcatgacatgcagaaccgccaggtcctgttcagcaaccacagcctgggcctgcaa
cttggctacagcaaggctgagttgcgtgccatgcgcgaggatttctgggtacaggtgctt
cacccggacgatgccgaatactactggcgcatccgtaacctgcaaaaagtggtcggcgat
ggcctgttgctcgagtcggtgctgcgctggcgtcatcgcaatggccaatggcactggttc
agcatccgcgagcaggccctggcgcgcgatgatcatggtcgcgtcagccgccttatcggc
gtagccaaggacatcaccgagcagatcgagcgcaaccagtcgctgcgcgacagtgaacag
cgctatcgcctgctggccgaaagcatcagcgatgtgatcttttccaccgacagcgcgctt
aacctcaattacgtcagcccttcggtggagccggtgctcggctattccgtcaactgggtg
atcgccaacagtttctacagcctggcggccaacccgcagcagctggaaggcctgaacctg
ctcctcgaacgcatccgcgatgcgctcggcgagcgcgatcgcctcaatcgcctgcgcgac
gaactgccggaccaactgttcgtcttcgactgcctgcgcgccgatggccacaagattccg
gtggagctgcgcctggtgctgatgtgggacgagagcggccgcttcgaaggcatccttggc
gtcggccgcgacatcagccaacaacgccgcgcggagaaagacctgcgcatggccgctacg
gttttcgaacactccaccgcggcgattctggtcaccgatccggccggctatatcgtccag
gtcaacaaggcgttcagccgcgtcagcggctattcggccggccaggtgctcgaccagttg
cccggcatgctgaccgccgaccgtcagcaagccacccatatgcagtacatcctcggccag
ctcaaccagcgcggcagctgggaaggcgaggtgtggctcaaacgcaagggcggagagaat
ttcccggcctgggtcggcatcaccgcggtgcatgacgaggaaggcgacctggtcagctac
gtgtgcttcttcagcgacatcagcgagcgcaaggccagcgagcagcgcatccatcgcctg
gcctactacgatgccctgacccacctgcccaaccgcaccctgtttcaggatcgcctgcac
agtgccctgcagcatgccgaacggcataacgagtgggtggtgttgatgttcctcgacctc
gaccgcttcaagccgatcaacgattcgctcggccatgccgctggcgaccgcatgctcaag
gacgtggccgtgcgcctgtccgcctgcgtcgacggcgacgacaccgtggcgcgtatgggc
ggtgacgaattcaccctgctgctgcagccacgcgccacccgtgagggcgcgctgaatcgc
gccattcatgttgccgagcagattctctccagtctggcccgccccttcgtcctcgaaggc
cgcgagttcttcgtcaccgccagtatcggcatcgccctcgccccgcaggacggcaacgaa
ctgagccagctgatgaagaacgccgacaccgccatgtaccacgccaaggagcggggcaag
aacaacttccagttctaccaggccgacatgaacgccagcgccctggaacgcctggagctg
gaaagcgacctgcgccacgcccaggagcagggccagttcgtgctgcattaccaaccgcag
ttctccggcgatggtcgccgcctcaccggagtcgaagcgctgctgcgctggaatcacccg
acccgcggcctggtgcctccggatgagttcatcccggtgctggaggagcttggtctggtg
gtgcaggtcggtgagtgggtgctggaagaatcgtgcaggcagctcaaggcctggcacgag
gaaaagatccgcatccccaaggtctcggtcaatctgtccgcccgtcagttcggcgagggc
gatctgacagcgcgtatcgccaccatcctggaaaggactggggtagccccggcgtgcctg
gaagtggaactgaccgaaagcatcctgatgcgcgacgtttccagtgcgatgcagaccctc
aacgagctcaagcgccttggcctgtgcatcgcggtggacgatttcggcacaggctactcg
tcgctgaactacctcaagcagttccccatcgatgtgttgaagatcgaccgcagcttcgtc
gacggcctgcctgatggcgagcaggatgcgcagatcgcccgcgcaatcatcgccatggcg
cacagcctgaacatgatggtgatcgccgaaggcgtggaaagtcatgctcagctggagttc
ctgcgcgagcatggctgcgacgaagtgcagggctacctgctgggcaggccgatgcaggcg
cgccaattcagcgcccagttcggcggtgcggcgctgttcatactcagctag
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