Pseudomonas mendocina NK-01: MDS_2373
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Entry
MDS_2373 CDS
T01473
Name
(GenBank) isocitrate dehydrogenase, NADP-dependent
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pmk
Pseudomonas mendocina NK-01
Pathway
pmk00020
Citrate cycle (TCA cycle)
pmk00480
Glutathione metabolism
pmk01100
Metabolic pathways
pmk01110
Biosynthesis of secondary metabolites
pmk01120
Microbial metabolism in diverse environments
pmk01200
Carbon metabolism
pmk01210
2-Oxocarboxylic acid metabolism
pmk01230
Biosynthesis of amino acids
Module
pmk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pmk_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
MDS_2373
09106 Metabolism of other amino acids
00480 Glutathione metabolism
MDS_2373
Enzymes [BR:
pmk01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
MDS_2373
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Gene cluster
GFIT
Motif
Pfam:
IDH
Motif
Other DBs
NCBI-ProteinID:
AEB58404
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All DBs
Position
complement(2595460..2597688)
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AA seq
742 aa
AA seq
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MSTPSKIIYTFTDEAPALATYSLLPIVEAFAASADISVETRDISLAGRILASFADRLDAD
KRIDDDLAKLAELTLQPDANIIKLPNISASVPQLKAAIAELQAQGYNIPDFPEDPQSEED
KEVRARYAKVLGSAVNPVLREGNSDRRAPAAVKAYARKHPHSMGKWSMASQSHADYMRGG
DFFSSEQSITMAKAGDVRIEFVGKDGKVEVKKQLALQEGEVFDSMFMSCRKLRAFFEKTL
QDCKETGVMWSLHVKATMMKVSHPIVFGHAVSVYYKDVFDKYGDLFKELGVNPNNGISSV
YDKIKSLPASQQEEILHDIHEVYAHRPEMAMVDSVKGITNLHIPSDVIVDASMPAMIRNS
GQMWGKDGKQKDTKAVMPESTYARIYQEMINFCKTNGAFDPTTMGSVPNVGLMAQKAEEY
GSHDKTFEMTADGTMRVVAADGTVLMQHEVEAGDIWRACQTKDAPIRDWVKLAVTRARQS
DTPAIFWLDPERAHDRELQKKVELYLKDHDLTGLDIRMMGYNEAIRVSMERMIRGQDTIS
VTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMAGGGMYETGAGGSAPKHVQQLVEENYLR
WDSLGEFLALAVSLEETGIKTNNAKAKVLGKTLDQATGKLLDNNKSPARKVGEIDNRGSH
FYLALYWAQALAEQNDDAELKAHFAPLAKQLTEQEATIVAELAAVQGKPAEIGGYYRSNP
ELTSKVMRPSTTFNAALAALNA
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccttcgaagatcatctacaccttcaccgacgaagccccggcacttgccacc
tattcgcttctgcccatcgtggaagcctttgccgcctcggctgacatctccgttgaaacc
cgcgacatctctcttgctgggcgaatcctggcgagctttgccgaccgtctggacgctgac
aagcgcatcgatgacgacctggccaagctggctgagctgaccctgcagcctgacgccaac
atcatcaaactgccgaacatcagtgcctccgtccctcagctcaaggccgccatcgccgag
ctgcaggcccagggctacaacatcccggacttcccggaagatccgcagagcgaagaagac
aaggaagttcgcgcgcgttacgccaaggttctcggcagcgctgtcaacccggttctgcgc
gaaggcaactccgaccgccgtgctccggccgcggtaaaagcctacgcccgcaagcacccg
cacagcatgggcaagtggagcatggcttcgcagtcccacgccgactacatgcgcggcggc
gacttcttctccagcgagcagtcgatcaccatggccaaggccggtgatgtgcgtatcgag
ttcgtcggcaaggacggcaaggtcgaagtcaagaaacaactcgccctgcaggaaggcgaa
gtgttcgacagcatgttcatgagctgccgcaagctgcgcgccttcttcgagaagaccctg
caagactgcaaggaaaccggcgtaatgtggtccctgcacgtcaaggcaaccatgatgaag
gtctcccacccgatcgtcttcggtcatgccgtcagcgtttactacaaggacgtgttcgac
aagtacggcgacctgttcaaggaactgggcgtcaacccgaacaacggcatcagcagcgtc
tacgacaagatcaagtcgctgccagcctcgcagcaggaagaaatcctgcatgacatccac
gaggtttatgctcatcgcccggaaatggcgatggtcgactcggtcaagggcatcactaac
ctgcacatcccgagcgacgtcattgtcgacgcctcgatgccggccatgatccgcaactcc
ggtcagatgtggggcaaagatggcaagcagaaagacaccaaggcggtcatgcctgagagc
acctacgctcgcatctatcaggaaatgatcaacttctgcaaaaccaacggtgcgttcgac
ccgaccaccatgggcagcgtgccgaacgttggcctgatggcgcagaaagccgaagaatac
ggctctcacgacaagaccttcgaaatgaccgccgacggcaccatgcgcgtcgtagctgcc
gatggcaccgtgctgatgcagcacgaagtcgaagctggcgatatttggcgcgcctgccag
accaaggacgccccgatccgcgactgggtcaagctggccgttacccgtgcccgtcaatcc
gataccccggccatcttctggctggacccggagcgcgcccatgatcgcgagctgcagaag
aaagtcgagctgtacctcaaggatcacgatctgaccggtctggacattcgcatgatgggc
tacaacgaggccatccgcgtgtccatggagcgcatgatccgtggccaggacaccatctcg
gtgaccggtaacgtgctgcgtgactacctgaccgacctgttcccgatcatggagctgggt
acttcggccaagatgctgtccatcgttccgctgatggccggcggcggcatgtatgaaacc
ggcgccggcggctcggctcccaagcacgtacaacagctggtcgaagagaactacctgcgc
tgggattccctgggcgagttcctggccttggccgtatcgctggaagaaaccggcatcaag
accaacaacgccaaggccaaggtactgggcaagaccctggaccaggctaccggcaagctg
ctggacaacaacaagtccccggcgcgcaaggtgggtgagatcgacaaccgtggcagccac
ttctatctggcgctgtactgggctcaagccctggccgagcagaacgacgatgccgagctg
aaggctcacttcgcgccgctggccaagcaattgaccgagcaggaagcgaccatcgttgcc
gaactggctgccgtgcaaggcaagccggctgagatcggtggctactaccgctccaacccc
gagctgaccagcaaggtgatgcgacccagcactaccttcaatgccgctctggctgcactg
aatgcctga
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