KEGG   Pseudomonas mendocina NK-01: MDS_2901
Entry
MDS_2901          CDS       T01473                                 
Name
(GenBank) type II secretion system protein E
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
pmk  Pseudomonas mendocina NK-01
Pathway
pmk02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pmk00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    MDS_2901
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pmk02044]
    MDS_2901
Enzymes [BR:pmk01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     MDS_2901
Secretion system [BR:pmk02044]
 Type IV secretion system
  Trb secretion system protein
   MDS_2901
SSDB
Motif
Pfam: T2SSE Zeta_toxin TrwB_AAD_bind FtsK_SpoIIIE nSTAND3 AAA_16 DEAD CbiA AAA_30 AAA_28 AAA_29 IstB_IS21 ResIII ABC_tran Dynamin_N AAA_25 MobB ATPase CPT GTP_EFTU AAA_7 MMR_HSR1 CLP1_P
Other DBs
NCBI-ProteinID: AEB58932
LinkDB
Position
3205966..3206934
AA seq 322 aa
MLRTAMGPLIAAALDDSDVVEVMLNPDGVLWLDRLSVGRARLGTLAAADGERIIRLVAAH
VGQEVHRNKPLLSAELPETGERFEGVLPPVVAGPTFALRKRAAGVIPLHQYVADGILSAA
QVEHLRVAVRERQNILVAGGTSSGKTTLANALLAEVAGSGDRVLVLEDTVELQCPALDHV
ALRTKPGVVSMADLVRSTLRLRPDRVVVGEVRGGEALDLVKAWGTGHPGGIATLHAGSAQ
GALLRLEQLILEVALTAPRALIAEAVNLVVFLAGRGRTRYVQQIVRVTGYDERGYQLTSI
APAFIPSLPQENSHDCLPSPRC
NT seq 969 nt   +upstreamnt  +downstreamnt
atgttgcgcacggcgatgggcccgctgatcgctgccgccctggatgattcggacgtggtc
gaggtgatgctcaaccctgatggcgtgctttggctggatcgcctgtcagttggccgcgcc
cggttgggcacgctagcggctgcagacggtgaacggatcatccgcctggtggcagcgcat
gtcggccaggaggtacatcgcaacaagccgctacttagcgccgagctgccagagactggc
gagcgcttcgaaggtgtactgccgcccgtggtggccgggccgaccttcgctctgcgcaag
cgcgcagccggtgtcatcccgctacaccagtatgtggctgacggcattctcagcgctgcg
caggtagaacacctgcgcgtggccgtacgtgagcgacagaacatcctggtggccggcggc
accagcagcggtaagaccactctggccaatgcgctgctggccgaggtggccggcagcggc
gaccgcgtgctggtgctggaggacacggtcgaactgcagtgtccggccctcgatcacgtc
gctctgcgcaccaagcccggcgtggtctccatggctgatctggtgcgcagcacgctgcgt
ctgcgccccgatcgcgtggtggtcggcgaggttcgcggcggcgaagcgctggacctagtc
aaggcctggggcaccggccatcccggcggtatcgccacccttcatgccggctctgcacag
ggcgcactgctgcgcctggagcaactgattctggaggtcgccctgaccgcaccgcgggcg
ctgatagccgaggcggtcaacctggtggtgtttcttgccggccgtggccgcacgcgctat
gtccagcagatcgtccgcgtcaccggctatgacgagcgcggctatcaactcacgtctatc
gcccccgcatttattccttcgctgcctcaggaaaacagccatgactgcctgccatccccg
cgttgctaa

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