Passer montanus (Eurasian tree sparrow): 120502239
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Entry
120502239 CDS
T07277
Symbol
CNOT6L
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120502239 (CNOT6L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoa03019
]
120502239 (CNOT6L)
Enzymes [BR:
pmoa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
120502239 (CNOT6L)
Messenger RNA biogenesis [BR:
pmoa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120502239 (CNOT6L)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120502239 (CNOT6L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_1
LRR_9
Motif
Other DBs
NCBI-GeneID:
120502239
NCBI-ProteinID:
XP_039565419
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MPKEKYDPPDPRRIYTIMSAEEVANGKKSHWAELEISGRVRSLSTSLWSLTHLTALHLND
NNLTRIPPDIAKLHNLVYLDLSSNKLRSLPAELGNMVSLRELLLNNNLLRVLPYELGRLF
QLQTLGLKGNPLSQDILSLYQDPDGTRKLLNYMLDNLAVHPEQLPPRPWITLKERDQILP
SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ
YFTLFLPALKERGYDGFFSPKSRAKIMSEQEKKHVDGCAIFFKTEKFTLVQKHTVEFNQV
AMANSEGSEAMLNRVMTKDNIGVAVVLEVHKELFGASMKSLHVDKQLLIVANAHMHWDPE
YSDVKLIQTMMFVSELKNILEKASSRPSSPTADPNSIPLVLCADLNSLPDSGVVEYLSNG
IVADNHKDFKELRYNECLMNFSGNGKNGASEGRITHGFQLKSAYENNLMPYTNYTFDFKG
VIDYIFYSNTHMNVLGVLGPLDPQWLVDNNITGCPHPHIPSDHFSLLTQLELQPPLLPLV
NGMHLPSCR
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggaaaaatatgatcctccagatccccgcagaatttacaccatcatgtcggcg
gaagaggtggccaacgggaagaagtcgcactgggctgaattagagatctcggggagagtg
cggagcttaagcacgtcgctgtggtcgctgacacacctgactgctctgcacctcaatgac
aacaaccttactcgcattccacctgatattgccaagcttcacaacctggtttacctggat
ctgtcatccaacaaactcagaagtttaccagcagaactaggaaacatggtgtctctcagg
gaattgcttttaaataacaatctgttacgggttttgccttatgaacttggacggctcttc
cagctgcaaaccctgggtttgaaaggcaatcctttatcccaagatattctcagcctctac
caggatccagacggaacccgaaagctactgaactacatgcttgacaatctagcagttcat
ccagagcagctgcctccaaggccatggattactttaaaagaacgagaccaaattctgccc
tcagcttcatttacagtcatgtgttacaatgtgttgtgtgataaatacgccacccggcag
ctctatggctactgcccctcctgggcactcaactgggagtacaggaaaaagggaatcatg
gaagaaatagtcaactgtgatgcagacatcattagtcttcaggaagtggaaacggagcaa
tacttcacccttttcctgccagccttgaaagaacggggatacgacgggttcttttctcca
aagtcacgtgccaaaatcatgtcggagcaggagaaaaagcacgtggatggctgcgcgata
ttcttcaaaacggaaaagttcactctggtgcagaagcacacggtggagttcaaccaggtg
gccatggccaactcggagggctcggaagccatgttgaacagagtgatgaccaaggacaac
atcggggtcgccgtggtgttggaggtgcacaaggaattatttggagcaagtatgaaatcg
cttcacgtggacaagcagctgctcatcgtggccaatgcccacatgcactgggaccccgaa
tactcagatgtgaaactcatccagaccatgatgttcgtctcagagctgaaaaacatcctg
gagaaagcctcgagcaggcccagtagcccgacagcagatcccaactctatccctctggtg
ctgtgtgcggacctcaactcactgcctgattcaggtgtagtggaatacctgagcaacggc
atagtagctgacaaccacaaggacttcaaggagctgcgctacaacgagtgtctgatgaac
ttcagcggcaacggcaagaacggagcctcggagggcaggatcacgcacggcttccagctc
aagagcgcctacgagaacaacctgatgccttacaccaattacactttcgacttcaaaggt
gtgattgactacattttctactccaacactcacatgaacgtgctgggcgtgctgggccct
ttggaccctcagtggctggtggacaacaacatcacggggtgcccgcacccgcacatcccc
tcggaccacttctcgctgctgacgcagctggagctgcagccgccactgctgccgctggtg
aacggcatgcacctgccctcctgcaggtag
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